Gchil6334.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil6334.t1
Unique NameGchil6334.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length291
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:140213..141085 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6334Gchil6334Gracilaria chilensis NLEC103_M9 malegenetig00000196_pilon 140213..141085 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6334.t1.start1Gchil6334.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000196_pilon 140213..140215 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6334.t1.CDS1Gchil6334.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000196_pilon 140213..141085 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6334.t1.exon1Gchil6334.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000196_pilon 140213..141085 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6334.t1.stop1Gchil6334.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000196_pilon 141083..141085 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6334.t1Gchil6334.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000196_pilon 140213..141085 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil6334.t1 ID=Gchil6334.t1|Name=Gchil6334.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=291bp
MGLLELFKPLILGGDGPEFRAVFDSNDESSRPSRAQLFQMICNMEKPLRL
KDPLSVDHCSLLQLSFNAFAVEFRDMFRMIEGLLHHAHERSIEMDHLSVF
YDWFEGFFGIITSVFDNEENVFFPRIESAGFLTLQNSFSAKRRQTKKDRA
TQICWDILELKLHFDMKVDRKRSLFDLVYELRDEAEHLTARVMVYLQCEV
DELFGILKIKFNSLEIRNIEDTILRSYRSTEAGHFVLCAMARGIPDAGLR
NGFLEENFRSSGQKTPKQLRKFRKRHSDLVEKLAVRDLQL*
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spliced messenger RNA

>Gchil6334.t1 ID=Gchil6334.t1|Name=Gchil6334.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=873bp|location=Sequence derived from alignment at tig00000196_pilon:140213..141085+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTCTCCTTGAGTTGTTCAAACCTCTTATTCTGGGAGGTGATGGACC
AGAGTTTCGGGCTGTGTTTGATTCGAATGATGAATCATCCCGTCCGTCTC
GGGCACAACTATTTCAAATGATCTGTAATATGGAAAAGCCTTTGCGGCTG
AAGGACCCCTTGAGTGTCGACCATTGCTCGCTTTTACAATTGAGTTTCAA
TGCTTTTGCTGTGGAGTTTCGGGATATGTTCCGCATGATTGAGGGGCTGC
TGCATCATGCTCATGAACGTTCTATAGAAATGGATCACCTTTCTGTGTTC
TACGATTGGTTTGAAGGCTTCTTTGGGATTATAACAAGCGTCTTTGACAA
TGAAGAGAACGTTTTCTTTCCAAGGATTGAGTCCGCGGGGTTTCTCACGT
TGCAAAACTCTTTCAGTGCCAAACGCAGACAAACGAAGAAAGATCGAGCC
ACGCAAATATGTTGGGATATCCTCGAACTCAAGCTCCACTTCGATATGAA
AGTAGATCGTAAACGCAGTCTTTTTGATCTCGTCTATGAGTTGAGGGACG
AAGCAGAGCATTTAACAGCCCGAGTGATGGTGTATTTACAGTGTGAAGTG
GATGAACTCTTTGGCATTTTGAAGATTAAGTTCAACAGTCTGGAAATACG
CAACATCGAGGATACAATACTACGTTCATATCGCTCAACAGAGGCAGGAC
ACTTTGTTCTCTGCGCTATGGCACGAGGAATACCGGACGCTGGGCTCAGA
AATGGGTTTTTGGAAGAGAATTTTCGTTCCTCGGGACAGAAAACACCTAA
ACAGCTGCGGAAGTTTCGTAAAAGACATTCCGATCTAGTTGAGAAGCTCG
CTGTTCGAGATTTGCAGTTGTAA
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protein sequence of Gchil6334.t1

>Gchil6334.t1 ID=Gchil6334.t1|Name=Gchil6334.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=291bp
MGLLELFKPLILGGDGPEFRAVFDSNDESSRPSRAQLFQMICNMEKPLRL
KDPLSVDHCSLLQLSFNAFAVEFRDMFRMIEGLLHHAHERSIEMDHLSVF
YDWFEGFFGIITSVFDNEENVFFPRIESAGFLTLQNSFSAKRRQTKKDRA
TQICWDILELKLHFDMKVDRKRSLFDLVYELRDEAEHLTARVMVYLQCEV
DELFGILKIKFNSLEIRNIEDTILRSYRSTEAGHFVLCAMARGIPDAGLR
NGFLEENFRSSGQKTPKQLRKFRKRHSDLVEKLAVRDLQL*
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mRNA from alignment at tig00000196_pilon:140213..141085+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil6334.t1 ID=Gchil6334.t1|Name=Gchil6334.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=873bp|location=Sequence derived from alignment at tig00000196_pilon:140213..141085+ (Gracilaria chilensis NLEC103_M9 male)
ATGGGTCTCCTTGAGTTGTTCAAACCTCTTATTCTGGGAGGTGATGGACC
AGAGTTTCGGGCTGTGTTTGATTCGAATGATGAATCATCCCGTCCGTCTC
GGGCACAACTATTTCAAATGATCTGTAATATGGAAAAGCCTTTGCGGCTG
AAGGACCCCTTGAGTGTCGACCATTGCTCGCTTTTACAATTGAGTTTCAA
TGCTTTTGCTGTGGAGTTTCGGGATATGTTCCGCATGATTGAGGGGCTGC
TGCATCATGCTCATGAACGTTCTATAGAAATGGATCACCTTTCTGTGTTC
TACGATTGGTTTGAAGGCTTCTTTGGGATTATAACAAGCGTCTTTGACAA
TGAAGAGAACGTTTTCTTTCCAAGGATTGAGTCCGCGGGGTTTCTCACGT
TGCAAAACTCTTTCAGTGCCAAACGCAGACAAACGAAGAAAGATCGAGCC
ACGCAAATATGTTGGGATATCCTCGAACTCAAGCTCCACTTCGATATGAA
AGTAGATCGTAAACGCAGTCTTTTTGATCTCGTCTATGAGTTGAGGGACG
AAGCAGAGCATTTAACAGCCCGAGTGATGGTGTATTTACAGTGTGAAGTG
GATGAACTCTTTGGCATTTTGAAGATTAAGTTCAACAGTCTGGAAATACG
CAACATCGAGGATACAATACTACGTTCATATCGCTCAACAGAGGCAGGAC
ACTTTGTTCTCTGCGCTATGGCACGAGGAATACCGGACGCTGGGCTCAGA
AATGGGTTTTTGGAAGAGAATTTTCGTTCCTCGGGACAGAAAACACCTAA
ACAGCTGCGGAAGTTTCGTAAAAGACATTCCGATCTAGTTGAGAAGCTCG
CTGTTCGAGATTTGCAGTTGTAA
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Coding sequence (CDS) from alignment at tig00000196_pilon:140213..141085+

>Gchil6334.t1 ID=Gchil6334.t1|Name=Gchil6334.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=873bp|location=Sequence derived from alignment at tig00000196_pilon:140213..141085+ (Gracilaria chilensis NLEC103_M9 male)
ATGGGTCTCCTTGAGTTGTTCAAACCTCTTATTCTGGGAGGTGATGGACC
AGAGTTTCGGGCTGTGTTTGATTCGAATGATGAATCATCCCGTCCGTCTC
GGGCACAACTATTTCAAATGATCTGTAATATGGAAAAGCCTTTGCGGCTG
AAGGACCCCTTGAGTGTCGACCATTGCTCGCTTTTACAATTGAGTTTCAA
TGCTTTTGCTGTGGAGTTTCGGGATATGTTCCGCATGATTGAGGGGCTGC
TGCATCATGCTCATGAACGTTCTATAGAAATGGATCACCTTTCTGTGTTC
TACGATTGGTTTGAAGGCTTCTTTGGGATTATAACAAGCGTCTTTGACAA
TGAAGAGAACGTTTTCTTTCCAAGGATTGAGTCCGCGGGGTTTCTCACGT
TGCAAAACTCTTTCAGTGCCAAACGCAGACAAACGAAGAAAGATCGAGCC
ACGCAAATATGTTGGGATATCCTCGAACTCAAGCTCCACTTCGATATGAA
AGTAGATCGTAAACGCAGTCTTTTTGATCTCGTCTATGAGTTGAGGGACG
AAGCAGAGCATTTAACAGCCCGAGTGATGGTGTATTTACAGTGTGAAGTG
GATGAACTCTTTGGCATTTTGAAGATTAAGTTCAACAGTCTGGAAATACG
CAACATCGAGGATACAATACTACGTTCATATCGCTCAACAGAGGCAGGAC
ACTTTGTTCTCTGCGCTATGGCACGAGGAATACCGGACGCTGGGCTCAGA
AATGGGTTTTTGGAAGAGAATTTTCGTTCCTCGGGACAGAAAACACCTAA
ACAGCTGCGGAAGTTTCGTAAAAGACATTCCGATCTAGTTGAGAAGCTCG
CTGTTCGAGATTTGCAGTTGTAA
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