Gchil5906.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil5906.t1
Unique NameGchil5906.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1052
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025225_piloncontigtig00025225_pilon:120746..123901 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005704527.1
Preferred nameUBE3C
PFAMsHECT,IQ
Max annot lvl2759|Eukaryota
KEGG koko:K10589
KEGG Pathwayko04120,map04120
GOsGO:0000151,GO:0000209,GO:0000502,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006355,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006811,GO:0006950,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007417,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010992,GO:0010994,GO:0016032,GO:0016043,GO:0016567,GO:0016740,GO:0019058,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019899,GO:0019941,GO:0022607,GO:0023052,GO:0030163,GO:0030260,GO:0030433,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031624,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034220,GO:0034450,GO:0034622,GO:0034976,GO:0036211,GO:0036503,GO:0042221,GO:0042592,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044390,GO:0044403,GO:0044409,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046718,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051258,GO:0051603,GO:0051701,GO:0051704,GO:0051716,GO:0051806,GO:0051828,GO:0055085,GO:0060255,GO:0061630,GO:0061659,GO:0065003,GO:0065007,GO:0065008,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1905368,GO:1905369,GO:1990234,GO:2000112,GO:2000113,GO:2001141
Evalue3.04e-160
EggNOG OGsCOG5021@1|root,KOG0942@2759|Eukaryota
EC2.3.2.26
Descriptionubiquitin-protein transferase activity
COG categoryO
BRITEko00000,ko00001,ko01000,ko04121
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5906Gchil5906Gracilaria chilensis NLEC103_M9 malegenetig00025225_pilon 120746..123901 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil5906.t1.stop1Gchil5906.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00025225_pilon 120746..120748 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil5906.t1.CDS1Gchil5906.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00025225_pilon 120746..123901 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil5906.t1.exon1Gchil5906.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00025225_pilon 120746..123901 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil5906.t1.start1Gchil5906.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00025225_pilon 123899..123901 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil5906.t1Gchil5906.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00025225_pilon 120746..123901 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil5906.t1 ID=Gchil5906.t1|Name=Gchil5906.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1052bp
MQFFDRPRTRIALRGSSTRSATSQQLVAEAKKARLQRAHLRAQHAAATSI
QSAYRARHALNLAAEQLATHPRTACDTRASLSSLLLVAGLLAEQPNCTSA
RLALLSRRVAVRTFLPRFVSLLADALHTDHVPQRLSSMPERMIVDAVVLI
VALVNHQLESQPSSQHLQSNNHSSMLTFCTRALSTALTLTRRLTANSLLP
QAKSALFVHIANLFKSFASLPVPQPLFTSLTHLTDALLTLLSQSNVPSNV
SNLLYRQFAISSLCISSFLRVYPLAIDSRLRKRLIHALAYPEHPPSEHAF
DWDYAGNLECLSERQSTIMLSNILQAQHSSWNISDQDALSSLTMVISKLL
SSLPKNVTLVDPSKVDDDDDDEDLMDEIIDEKAASEALEMKQVVKKLSVS
MTQIVSEDNVRALMAVAVRQGRDAIINVCKLFSFLLRKHPAMTNSFQTAL
ACWRRPRSGPKEHILRSLWRTCREAYSDGESPSSSSDELLTISSDTSPVL
LVFTTVYSYLLYIQDADEMFDSEWPFSIEEVRHIASVMKGFLYIAIFVRP
LYSLPGGTDIQNAAILREEPGLVEEISRLLSRLYACDSQRSFRTDDFFWL
AGRGTLSSTSFLQDAIEAGPEALLRAPSVTSINGIRQASYGTSRKSTISG
AAELLRIAPFLIPFSSRAKIFQNWIAEERKKANGGEFFFPSASHRLSVRR
NFIFQDAYRVLNVLGPTLKSTIRVKFIDEHGIEEAGIDGGGVFKEFMHEV
LRIGFSPYPYGLFKETPDGLLYPNPDAPVGNEDFKQQFAFLGRLLGKAVF
DGVLVNVPLAKFFLSKMLGQFNYPIDLGSLDPELYKHMKFLKSCDPSMVE
DLGLNFTVANNAYGSVKEVELVKNGRNIPVTAANRIEYMHRVANYRMNTQ
IREQSEAFLRGFSEVVPSHFIRLFSHEELQLLICGKTGQIDLEDLRRNTN
YSGGYDEDTPVVRWFWEVMEELNPEEQSKMLQFVTSSPRAPLLGFSYLVP
SFCIHRAEGDIRLPTASTCMNLLKLPQYKSLSVVREKIRYALDSNAGFDL
S*
back to top

spliced messenger RNA

>Gchil5906.t1 ID=Gchil5906.t1|Name=Gchil5906.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=3156bp|location=Sequence derived from alignment at tig00025225_pilon:120746..123901- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGTTCTTCGACCGCCCACGGACAAGGATCGCTCTCAGAGGTTCCTC
CACGCGTTCCGCCACCTCCCAGCAGCTCGTTGCAGAGGCCAAGAAGGCCC
GTTTGCAACGCGCTCATCTCCGTGCTCAACATGCTGCTGCAACTAGCATC
CAGTCCGCTTATCGTGCTCGACATGCCTTGAATCTGGCTGCGGAACAGCT
CGCTACACATCCCCGAACCGCATGTGATACCCGAGCTTCTCTTTCCTCGC
TCTTGCTTGTGGCCGGATTGCTTGCCGAACAGCCGAATTGCACTTCTGCG
CGCCTGGCGTTGCTCTCGCGTCGAGTTGCGGTCAGAACCTTCCTTCCGCG
TTTTGTTTCACTGCTCGCCGATGCGTTGCATACCGATCATGTTCCGCAAC
GCTTGAGTTCCATGCCAGAGCGTATGATTGTCGATGCTGTCGTTCTTATT
GTTGCGCTTGTCAATCATCAACTCGAATCACAACCATCTTCCCAACATCT
CCAATCCAATAACCACTCTTCTATGCTTACTTTTTGCACACGCGCGTTAT
CTACTGCACTCACTCTTACGAGACGACTCACCGCTAACTCTTTATTACCT
CAGGCAAAGTCGGCGCTCTTCGTTCATATTGCTAACCTTTTTAAATCCTT
CGCAAGTCTGCCTGTACCGCAACCACTTTTCACATCTCTTACTCATCTCA
CCGATGCACTGCTCACGTTGCTGTCCCAATCGAATGTACCGTCAAATGTA
TCCAACTTACTGTATAGACAATTCGCCATTTCTTCGCTTTGCATCTCATC
CTTCTTGCGAGTATACCCTCTTGCCATCGATTCCCGCCTGCGAAAAAGAC
TCATTCACGCATTGGCCTACCCGGAACATCCACCATCTGAACATGCATTC
GACTGGGATTATGCCGGTAATCTCGAGTGTTTGTCGGAACGACAATCGAC
CATTATGCTCTCCAACATTTTGCAAGCACAGCATAGCTCCTGGAATATTT
CCGATCAAGACGCTTTGAGCTCCTTGACAATGGTTATCTCTAAGCTTCTT
TCGTCACTCCCGAAGAATGTTACTCTAGTTGATCCTAGCAAGGTGGATGA
CGATGATGATGATGAAGATCTGATGGACGAAATAATCGACGAAAAGGCTG
CTAGCGAAGCTTTGGAAATGAAGCAAGTTGTCAAAAAGCTCAGTGTTTCC
ATGACCCAAATCGTGTCCGAAGACAATGTCCGTGCATTAATGGCTGTCGC
TGTCAGACAGGGAAGAGACGCTATCATCAACGTTTGCAAGCTCTTCAGTT
TTCTGTTGAGAAAGCATCCCGCAATGACAAATAGCTTCCAAACGGCCCTA
GCTTGCTGGCGTCGACCCAGGTCTGGACCGAAAGAGCATATTCTTAGGTC
CTTGTGGCGAACATGCCGGGAAGCGTATTCAGACGGAGAAAGCCCGAGTA
GCAGTTCTGATGAGTTGCTCACCATAAGTTCCGATACGTCTCCTGTTCTT
TTAGTCTTTACAACCGTTTATTCTTATCTTTTGTACATACAAGATGCTGA
TGAAATGTTTGATTCCGAGTGGCCGTTTTCTATTGAAGAAGTGCGACACA
TTGCATCTGTCATGAAGGGCTTTTTGTACATTGCTATTTTCGTGAGGCCT
CTCTATTCTCTACCAGGAGGAACTGATATCCAAAACGCGGCCATTCTGCG
CGAAGAGCCAGGACTGGTTGAGGAGATTTCACGTCTGCTATCCCGGCTCT
ATGCATGCGACTCACAACGTTCTTTTCGGACCGATGACTTTTTCTGGCTT
GCAGGAAGGGGCACATTGTCTTCCACTTCGTTTCTACAGGACGCCATCGA
GGCAGGTCCCGAAGCTCTGTTGCGAGCTCCCAGCGTGACGTCCATCAACG
GTATCAGGCAAGCATCGTATGGTACGAGCAGAAAGTCTACGATTAGCGGT
GCTGCTGAGCTTCTTCGGATCGCGCCATTCCTCATTCCGTTCTCATCACG
GGCGAAGATATTCCAGAATTGGATCGCTGAAGAAAGAAAAAAGGCGAATG
GAGGTGAATTTTTCTTTCCGAGCGCTTCTCACCGGTTATCCGTGCGCAGA
AACTTCATTTTTCAAGATGCATACCGAGTACTGAATGTATTGGGACCAAC
CCTAAAGTCTACCATCCGGGTAAAGTTTATTGATGAGCATGGGATTGAGG
AAGCAGGCATTGATGGCGGGGGTGTCTTTAAAGAGTTTATGCATGAGGTT
TTGCGAATAGGGTTCTCTCCATATCCGTACGGTTTATTTAAGGAAACTCC
CGACGGGCTTCTCTACCCAAATCCAGATGCACCAGTTGGAAATGAAGACT
TCAAGCAACAGTTTGCTTTCCTTGGTCGTCTTTTGGGCAAAGCTGTCTTT
GACGGAGTGCTTGTCAACGTTCCTTTAGCCAAGTTTTTTCTATCGAAGAT
GCTCGGGCAGTTTAACTACCCTATTGATCTCGGCTCTCTAGATCCCGAAC
TATACAAGCACATGAAATTTCTCAAAAGTTGTGATCCGTCCATGGTAGAA
GACTTGGGATTGAACTTTACGGTCGCGAATAACGCATACGGATCAGTCAA
GGAAGTTGAGCTTGTGAAGAACGGAAGAAACATACCAGTAACCGCTGCCA
ATAGAATCGAATACATGCATAGAGTTGCAAACTATCGTATGAACACCCAA
ATTCGCGAGCAAAGCGAAGCGTTCTTGCGAGGCTTCTCCGAAGTTGTTCC
CTCGCATTTCATTCGCTTATTTTCACATGAGGAGTTACAATTACTTATCT
GCGGAAAGACTGGCCAGATTGACCTCGAAGATTTGCGAAGAAATACAAAT
TACTCTGGAGGTTACGATGAAGACACTCCGGTCGTCAGGTGGTTTTGGGA
GGTTATGGAGGAATTGAACCCAGAGGAGCAGAGTAAGATGCTACAGTTCG
TTACGTCATCGCCAAGAGCACCTTTACTTGGGTTCTCGTACTTGGTTCCT
AGTTTTTGTATCCATCGGGCCGAAGGAGATATCCGCCTACCAACGGCTTC
GACATGTATGAACCTTCTCAAACTCCCGCAGTACAAATCGCTTTCGGTGG
TTCGAGAAAAAATCCGTTACGCTTTGGATTCAAACGCTGGATTTGATCTT
AGCTAA
back to top

protein sequence of Gchil5906.t1

>Gchil5906.t1 ID=Gchil5906.t1|Name=Gchil5906.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1052bp
MQFFDRPRTRIALRGSSTRSATSQQLVAEAKKARLQRAHLRAQHAAATSI
QSAYRARHALNLAAEQLATHPRTACDTRASLSSLLLVAGLLAEQPNCTSA
RLALLSRRVAVRTFLPRFVSLLADALHTDHVPQRLSSMPERMIVDAVVLI
VALVNHQLESQPSSQHLQSNNHSSMLTFCTRALSTALTLTRRLTANSLLP
QAKSALFVHIANLFKSFASLPVPQPLFTSLTHLTDALLTLLSQSNVPSNV
SNLLYRQFAISSLCISSFLRVYPLAIDSRLRKRLIHALAYPEHPPSEHAF
DWDYAGNLECLSERQSTIMLSNILQAQHSSWNISDQDALSSLTMVISKLL
SSLPKNVTLVDPSKVDDDDDDEDLMDEIIDEKAASEALEMKQVVKKLSVS
MTQIVSEDNVRALMAVAVRQGRDAIINVCKLFSFLLRKHPAMTNSFQTAL
ACWRRPRSGPKEHILRSLWRTCREAYSDGESPSSSSDELLTISSDTSPVL
LVFTTVYSYLLYIQDADEMFDSEWPFSIEEVRHIASVMKGFLYIAIFVRP
LYSLPGGTDIQNAAILREEPGLVEEISRLLSRLYACDSQRSFRTDDFFWL
AGRGTLSSTSFLQDAIEAGPEALLRAPSVTSINGIRQASYGTSRKSTISG
AAELLRIAPFLIPFSSRAKIFQNWIAEERKKANGGEFFFPSASHRLSVRR
NFIFQDAYRVLNVLGPTLKSTIRVKFIDEHGIEEAGIDGGGVFKEFMHEV
LRIGFSPYPYGLFKETPDGLLYPNPDAPVGNEDFKQQFAFLGRLLGKAVF
DGVLVNVPLAKFFLSKMLGQFNYPIDLGSLDPELYKHMKFLKSCDPSMVE
DLGLNFTVANNAYGSVKEVELVKNGRNIPVTAANRIEYMHRVANYRMNTQ
IREQSEAFLRGFSEVVPSHFIRLFSHEELQLLICGKTGQIDLEDLRRNTN
YSGGYDEDTPVVRWFWEVMEELNPEEQSKMLQFVTSSPRAPLLGFSYLVP
SFCIHRAEGDIRLPTASTCMNLLKLPQYKSLSVVREKIRYALDSNAGFDL
S*
back to top

mRNA from alignment at tig00025225_pilon:120746..123901-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil5906.t1 ID=Gchil5906.t1|Name=Gchil5906.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=3156bp|location=Sequence derived from alignment at tig00025225_pilon:120746..123901- (Gracilaria chilensis NLEC103_M9 male)
ATGCAGTTCTTCGACCGCCCACGGACAAGGATCGCTCTCAGAGGTTCCTC CACGCGTTCCGCCACCTCCCAGCAGCTCGTTGCAGAGGCCAAGAAGGCCC GTTTGCAACGCGCTCATCTCCGTGCTCAACATGCTGCTGCAACTAGCATC CAGTCCGCTTATCGTGCTCGACATGCCTTGAATCTGGCTGCGGAACAGCT CGCTACACATCCCCGAACCGCATGTGATACCCGAGCTTCTCTTTCCTCGC TCTTGCTTGTGGCCGGATTGCTTGCCGAACAGCCGAATTGCACTTCTGCG CGCCTGGCGTTGCTCTCGCGTCGAGTTGCGGTCAGAACCTTCCTTCCGCG TTTTGTTTCACTGCTCGCCGATGCGTTGCATACCGATCATGTTCCGCAAC GCTTGAGTTCCATGCCAGAGCGTATGATTGTCGATGCTGTCGTTCTTATT GTTGCGCTTGTCAATCATCAACTCGAATCACAACCATCTTCCCAACATCT CCAATCCAATAACCACTCTTCTATGCTTACTTTTTGCACACGCGCGTTAT CTACTGCACTCACTCTTACGAGACGACTCACCGCTAACTCTTTATTACCT CAGGCAAAGTCGGCGCTCTTCGTTCATATTGCTAACCTTTTTAAATCCTT CGCAAGTCTGCCTGTACCGCAACCACTTTTCACATCTCTTACTCATCTCA CCGATGCACTGCTCACGTTGCTGTCCCAATCGAATGTACCGTCAAATGTA TCCAACTTACTGTATAGACAATTCGCCATTTCTTCGCTTTGCATCTCATC CTTCTTGCGAGTATACCCTCTTGCCATCGATTCCCGCCTGCGAAAAAGAC TCATTCACGCATTGGCCTACCCGGAACATCCACCATCTGAACATGCATTC GACTGGGATTATGCCGGTAATCTCGAGTGTTTGTCGGAACGACAATCGAC CATTATGCTCTCCAACATTTTGCAAGCACAGCATAGCTCCTGGAATATTT CCGATCAAGACGCTTTGAGCTCCTTGACAATGGTTATCTCTAAGCTTCTT TCGTCACTCCCGAAGAATGTTACTCTAGTTGATCCTAGCAAGGTGGATGA CGATGATGATGATGAAGATCTGATGGACGAAATAATCGACGAAAAGGCTG CTAGCGAAGCTTTGGAAATGAAGCAAGTTGTCAAAAAGCTCAGTGTTTCC ATGACCCAAATCGTGTCCGAAGACAATGTCCGTGCATTAATGGCTGTCGC TGTCAGACAGGGAAGAGACGCTATCATCAACGTTTGCAAGCTCTTCAGTT TTCTGTTGAGAAAGCATCCCGCAATGACAAATAGCTTCCAAACGGCCCTA GCTTGCTGGCGTCGACCCAGGTCTGGACCGAAAGAGCATATTCTTAGGTC CTTGTGGCGAACATGCCGGGAAGCGTATTCAGACGGAGAAAGCCCGAGTA GCAGTTCTGATGAGTTGCTCACCATAAGTTCCGATACGTCTCCTGTTCTT TTAGTCTTTACAACCGTTTATTCTTATCTTTTGTACATACAAGATGCTGA TGAAATGTTTGATTCCGAGTGGCCGTTTTCTATTGAAGAAGTGCGACACA TTGCATCTGTCATGAAGGGCTTTTTGTACATTGCTATTTTCGTGAGGCCT CTCTATTCTCTACCAGGAGGAACTGATATCCAAAACGCGGCCATTCTGCG CGAAGAGCCAGGACTGGTTGAGGAGATTTCACGTCTGCTATCCCGGCTCT ATGCATGCGACTCACAACGTTCTTTTCGGACCGATGACTTTTTCTGGCTT GCAGGAAGGGGCACATTGTCTTCCACTTCGTTTCTACAGGACGCCATCGA GGCAGGTCCCGAAGCTCTGTTGCGAGCTCCCAGCGTGACGTCCATCAACG GTATCAGGCAAGCATCGTATGGTACGAGCAGAAAGTCTACGATTAGCGGT GCTGCTGAGCTTCTTCGGATCGCGCCATTCCTCATTCCGTTCTCATCACG GGCGAAGATATTCCAGAATTGGATCGCTGAAGAAAGAAAAAAGGCGAATG GAGGTGAATTTTTCTTTCCGAGCGCTTCTCACCGGTTATCCGTGCGCAGA AACTTCATTTTTCAAGATGCATACCGAGTACTGAATGTATTGGGACCAAC CCTAAAGTCTACCATCCGGGTAAAGTTTATTGATGAGCATGGGATTGAGG AAGCAGGCATTGATGGCGGGGGTGTCTTTAAAGAGTTTATGCATGAGGTT TTGCGAATAGGGTTCTCTCCATATCCGTACGGTTTATTTAAGGAAACTCC CGACGGGCTTCTCTACCCAAATCCAGATGCACCAGTTGGAAATGAAGACT TCAAGCAACAGTTTGCTTTCCTTGGTCGTCTTTTGGGCAAAGCTGTCTTT GACGGAGTGCTTGTCAACGTTCCTTTAGCCAAGTTTTTTCTATCGAAGAT GCTCGGGCAGTTTAACTACCCTATTGATCTCGGCTCTCTAGATCCCGAAC TATACAAGCACATGAAATTTCTCAAAAGTTGTGATCCGTCCATGGTAGAA GACTTGGGATTGAACTTTACGGTCGCGAATAACGCATACGGATCAGTCAA GGAAGTTGAGCTTGTGAAGAACGGAAGAAACATACCAGTAACCGCTGCCA ATAGAATCGAATACATGCATAGAGTTGCAAACTATCGTATGAACACCCAA ATTCGCGAGCAAAGCGAAGCGTTCTTGCGAGGCTTCTCCGAAGTTGTTCC CTCGCATTTCATTCGCTTATTTTCACATGAGGAGTTACAATTACTTATCT GCGGAAAGACTGGCCAGATTGACCTCGAAGATTTGCGAAGAAATACAAAT TACTCTGGAGGTTACGATGAAGACACTCCGGTCGTCAGGTGGTTTTGGGA GGTTATGGAGGAATTGAACCCAGAGGAGCAGAGTAAGATGCTACAGTTCG TTACGTCATCGCCAAGAGCACCTTTACTTGGGTTCTCGTACTTGGTTCCT AGTTTTTGTATCCATCGGGCCGAAGGAGATATCCGCCTACCAACGGCTTC GACATGTATGAACCTTCTCAAACTCCCGCAGTACAAATCGCTTTCGGTGG TTCGAGAAAAAATCCGTTACGCTTTGGATTCAAACGCTGGATTTGATCTT AGCTAA
back to top

Coding sequence (CDS) from alignment at tig00025225_pilon:120746..123901-

>Gchil5906.t1 ID=Gchil5906.t1|Name=Gchil5906.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=3156bp|location=Sequence derived from alignment at tig00025225_pilon:120746..123901- (Gracilaria chilensis NLEC103_M9 male)
ATGCAGTTCTTCGACCGCCCACGGACAAGGATCGCTCTCAGAGGTTCCTC
CACGCGTTCCGCCACCTCCCAGCAGCTCGTTGCAGAGGCCAAGAAGGCCC
GTTTGCAACGCGCTCATCTCCGTGCTCAACATGCTGCTGCAACTAGCATC
CAGTCCGCTTATCGTGCTCGACATGCCTTGAATCTGGCTGCGGAACAGCT
CGCTACACATCCCCGAACCGCATGTGATACCCGAGCTTCTCTTTCCTCGC
TCTTGCTTGTGGCCGGATTGCTTGCCGAACAGCCGAATTGCACTTCTGCG
CGCCTGGCGTTGCTCTCGCGTCGAGTTGCGGTCAGAACCTTCCTTCCGCG
TTTTGTTTCACTGCTCGCCGATGCGTTGCATACCGATCATGTTCCGCAAC
GCTTGAGTTCCATGCCAGAGCGTATGATTGTCGATGCTGTCGTTCTTATT
GTTGCGCTTGTCAATCATCAACTCGAATCACAACCATCTTCCCAACATCT
CCAATCCAATAACCACTCTTCTATGCTTACTTTTTGCACACGCGCGTTAT
CTACTGCACTCACTCTTACGAGACGACTCACCGCTAACTCTTTATTACCT
CAGGCAAAGTCGGCGCTCTTCGTTCATATTGCTAACCTTTTTAAATCCTT
CGCAAGTCTGCCTGTACCGCAACCACTTTTCACATCTCTTACTCATCTCA
CCGATGCACTGCTCACGTTGCTGTCCCAATCGAATGTACCGTCAAATGTA
TCCAACTTACTGTATAGACAATTCGCCATTTCTTCGCTTTGCATCTCATC
CTTCTTGCGAGTATACCCTCTTGCCATCGATTCCCGCCTGCGAAAAAGAC
TCATTCACGCATTGGCCTACCCGGAACATCCACCATCTGAACATGCATTC
GACTGGGATTATGCCGGTAATCTCGAGTGTTTGTCGGAACGACAATCGAC
CATTATGCTCTCCAACATTTTGCAAGCACAGCATAGCTCCTGGAATATTT
CCGATCAAGACGCTTTGAGCTCCTTGACAATGGTTATCTCTAAGCTTCTT
TCGTCACTCCCGAAGAATGTTACTCTAGTTGATCCTAGCAAGGTGGATGA
CGATGATGATGATGAAGATCTGATGGACGAAATAATCGACGAAAAGGCTG
CTAGCGAAGCTTTGGAAATGAAGCAAGTTGTCAAAAAGCTCAGTGTTTCC
ATGACCCAAATCGTGTCCGAAGACAATGTCCGTGCATTAATGGCTGTCGC
TGTCAGACAGGGAAGAGACGCTATCATCAACGTTTGCAAGCTCTTCAGTT
TTCTGTTGAGAAAGCATCCCGCAATGACAAATAGCTTCCAAACGGCCCTA
GCTTGCTGGCGTCGACCCAGGTCTGGACCGAAAGAGCATATTCTTAGGTC
CTTGTGGCGAACATGCCGGGAAGCGTATTCAGACGGAGAAAGCCCGAGTA
GCAGTTCTGATGAGTTGCTCACCATAAGTTCCGATACGTCTCCTGTTCTT
TTAGTCTTTACAACCGTTTATTCTTATCTTTTGTACATACAAGATGCTGA
TGAAATGTTTGATTCCGAGTGGCCGTTTTCTATTGAAGAAGTGCGACACA
TTGCATCTGTCATGAAGGGCTTTTTGTACATTGCTATTTTCGTGAGGCCT
CTCTATTCTCTACCAGGAGGAACTGATATCCAAAACGCGGCCATTCTGCG
CGAAGAGCCAGGACTGGTTGAGGAGATTTCACGTCTGCTATCCCGGCTCT
ATGCATGCGACTCACAACGTTCTTTTCGGACCGATGACTTTTTCTGGCTT
GCAGGAAGGGGCACATTGTCTTCCACTTCGTTTCTACAGGACGCCATCGA
GGCAGGTCCCGAAGCTCTGTTGCGAGCTCCCAGCGTGACGTCCATCAACG
GTATCAGGCAAGCATCGTATGGTACGAGCAGAAAGTCTACGATTAGCGGT
GCTGCTGAGCTTCTTCGGATCGCGCCATTCCTCATTCCGTTCTCATCACG
GGCGAAGATATTCCAGAATTGGATCGCTGAAGAAAGAAAAAAGGCGAATG
GAGGTGAATTTTTCTTTCCGAGCGCTTCTCACCGGTTATCCGTGCGCAGA
AACTTCATTTTTCAAGATGCATACCGAGTACTGAATGTATTGGGACCAAC
CCTAAAGTCTACCATCCGGGTAAAGTTTATTGATGAGCATGGGATTGAGG
AAGCAGGCATTGATGGCGGGGGTGTCTTTAAAGAGTTTATGCATGAGGTT
TTGCGAATAGGGTTCTCTCCATATCCGTACGGTTTATTTAAGGAAACTCC
CGACGGGCTTCTCTACCCAAATCCAGATGCACCAGTTGGAAATGAAGACT
TCAAGCAACAGTTTGCTTTCCTTGGTCGTCTTTTGGGCAAAGCTGTCTTT
GACGGAGTGCTTGTCAACGTTCCTTTAGCCAAGTTTTTTCTATCGAAGAT
GCTCGGGCAGTTTAACTACCCTATTGATCTCGGCTCTCTAGATCCCGAAC
TATACAAGCACATGAAATTTCTCAAAAGTTGTGATCCGTCCATGGTAGAA
GACTTGGGATTGAACTTTACGGTCGCGAATAACGCATACGGATCAGTCAA
GGAAGTTGAGCTTGTGAAGAACGGAAGAAACATACCAGTAACCGCTGCCA
ATAGAATCGAATACATGCATAGAGTTGCAAACTATCGTATGAACACCCAA
ATTCGCGAGCAAAGCGAAGCGTTCTTGCGAGGCTTCTCCGAAGTTGTTCC
CTCGCATTTCATTCGCTTATTTTCACATGAGGAGTTACAATTACTTATCT
GCGGAAAGACTGGCCAGATTGACCTCGAAGATTTGCGAAGAAATACAAAT
TACTCTGGAGGTTACGATGAAGACACTCCGGTCGTCAGGTGGTTTTGGGA
GGTTATGGAGGAATTGAACCCAGAGGAGCAGAGTAAGATGCTACAGTTCG
TTACGTCATCGCCAAGAGCACCTTTACTTGGGTTCTCGTACTTGGTTCCT
AGTTTTTGTATCCATCGGGCCGAAGGAGATATCCGCCTACCAACGGCTTC
GACATGTATGAACCTTCTCAAACTCCCGCAGTACAAATCGCTTTCGGTGG
TTCGAGAAAAAATCCGTTACGCTTTGGATTCAAACGCTGGATTTGATCTT
AGCTAA
back to top