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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005703958.1 |
| Preferred name | srk1 |
| PFAMs | Pkinase |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K08286,ko:K08794 |
| KEGG Pathway | ko04921,ko04925,map04921,map04925 |
| GOs | GO:0000166,GO:0000935,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005516,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005938,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0006979,GO:0007154,GO:0007165,GO:0007231,GO:0007346,GO:0008144,GO:0008150,GO:0008152,GO:0009628,GO:0009987,GO:0010389,GO:0010515,GO:0010564,GO:0010948,GO:0010972,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018105,GO:0018107,GO:0018193,GO:0018209,GO:0018210,GO:0019538,GO:0023052,GO:0030428,GO:0030554,GO:0031135,GO:0031137,GO:0031138,GO:0031647,GO:0031974,GO:0031981,GO:0032092,GO:0032153,GO:0032155,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0033043,GO:0033554,GO:0034399,GO:0034599,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0040020,GO:0042221,GO:0042763,GO:0042764,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043393,GO:0043412,GO:0043900,GO:0043901,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045786,GO:0045930,GO:0046999,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051098,GO:0051099,GO:0051128,GO:0051285,GO:0051286,GO:0051445,GO:0051716,GO:0051726,GO:0051783,GO:0060341,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070887,GO:0071214,GO:0071470,GO:0071704,GO:0071944,GO:0072324,GO:0097159,GO:0097367,GO:0099568,GO:0099738,GO:0104004,GO:0140096,GO:1900180,GO:1900181,GO:1901265,GO:1901363,GO:1901564,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902749,GO:1902750,GO:1903827,GO:1903828,GO:2000241,GO:2000242 |
| Evalue | 6.16e-94 |
| EggNOG OGs | KOG0032@1|root,KOG0032@2759|Eukaryota |
| EC | 2.7.11.17 |
| Description | protein serine/threonine kinase activity |
| COG category | T |
| BRITE | ko00000,ko00001,ko01000,ko01001 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil5810.t1 ID=Gchil5810.t1|Name=Gchil5810.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=795bp MDAPHRAHPHPHPHPHPSSNPHADASADAEPDADTEARALLAHHAAAASP LRYTAVHPPRVEGWLAKEARRSLRTRRTRYFTLDGTILASHRTKSAPASW HVSLADALVEPGPLPREIRLSLPTRTLSFVAPTPPAFRMWIVALRRASLF SSRVDHYYAVGRLIGEGMNGQVRLAHDRMTHEPVAIKMVPRLRRENETHF LAREVQILLSIAHPNIVRTLDVFVRTRRIHFVMEYLPGGELFDFISQNTH FTELHAAAVMTDLLNALHYLHTRNIVHRDVKLENLLCTSTTWPLNVKLAD FGFANYVNSRDRPILNSFVGTPYYIAPEMLRGDPHGCAVDVWATGVVLYI LLSGKFPFGGNNESEYYQRVLAKPAYFPADEWRDVSHDAKSLVRGMLCKD PHKRLTVEQCLRHPWLARRAHALPSPSSSPSPSSTLVPPPQRALSPPEQL VVREPNLRTATALRHTRAKRGKWRHLAMLNRSLSAAPDAVLPHQLPVDYA RPKHTLSDCASASCARSPPSAPPSDSASNSVVVTDSELINRRPTLIRRIL SSQKLSLDRYQCPLPCARPSTATAAATAAAATSAVDNKLDHASANPRKTL SLFSKDGPLRRSFHRVADRATADGNHAINFANLQSQKLPPKIARERQRQQ KLAEAAAKRGATRGGIFTTCKLAAAELAAHNQRYHSSPRLAAHMLETLQT SFVPPVSEAARLEERAACCGVEDVLEPVSSPPSVARSGMDMCGMIDEHGD EVQRAESMEYGDMESLGGVSQHQLNPLNQLHGVYSRGRAVPLGL* back to topspliced messenger RNA >Gchil5810.t1 ID=Gchil5810.t1|Name=Gchil5810.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2385bp|location=Sequence derived from alignment at tig00004449_pilon:404986..407370+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGACGCCCCCCATCGCGcccatccccatccccatccccatccccaccc caGCTccaacccccacgccgacgccagcgccgacgccgaacccgacgccg acACAGAAGCGCGCGCGCTGCTCGCCCACCACGCTGCCGCAGCCTCCCCC CTGCGCTACACCGCCGTCCACCCGCCGCGCGTCGAGGGCTGGCTCGCCAA GGAGGCCCGCCGTTCGCTCCGCACCCGACGCACACGCTATTTCACCCTAG ACGGCACCATCCTCGCCTCGCATCGTACCAAGAGCGCCCCGGCCTCATGG CACGTCTCTCTGGCCGATGCGCTCGTCGAGCCCGGCCCGTTACCGCGCGA GATCCGACTGTCCTTGCCCACGCGCACCCTGTCCTTCGTCGCCCCGACAC CCCCGGCCTTTCGCATGTGGATTGTTGCCCTGCGCCGCGCCTCGCTCTTC AGCTCGCGTGTCGACCATTATTACGCCGTGGGCCGCCTCATCGGCGAGGG AATGAACGGTCAGGTGCGTTTGGCCCACGACAGGATGACCCACGAGCCCG TCGCCATCAAGATGGTCCCGCGCCTGCGCCGCGAGAACGAAACCCACTTC CTGGCCCGCGAGGTGCAGATCCTGCTTTCCATTGCTCACCCCAACATCGT GCGTACCCTCGACGTCTTTGTGCGCACCCGTCGCATCCACTTTGTCATGG AGTATCTGCCCGGCGGCGAGCTCTTCGACTTTATCTCGCAAAACACCCAC TTCACAGAGTTGCACGCCGCCGCCGTCATGACCGACCTGCTCAACGCCCT GCACTatctgcacacgcgcaacattgtgcaccgcgacgtcaagctggaga acctgctgtgcaccagcaccacgtggccgctcaacgtcaaactcgccgac tttggctttgccaactacgtcaacagccgcgaccgccccatcctcaacag ttttgtcggcacgccgtactacattgcgccggaaatgctgcgcggtgacc cgcacggctgcgccgtcgacgtgtgggccACCGGCGTCGTGCTCTACATC CTGCTCAGCGGCAAGTTCCCGTTTGGCGGCAACAACGAGTCCGAGTACTA CCAGCGCGTGCTAGCCAAGCCCGCCTACTTCCCTGCTGACGAGTGGCGCG ACGTGTCGCACGATGCCAAGAGCCTCGTGCGCGGCATGCTGTGCAAAGAT CCCCACAAGCGTCTCACCGTGGAGCAATGTTTGCGCCACCCGTGGCTAGC Gcgtcgcgcccacgcgttgccatcgccgtcgtcgtcgccgtcgccgtcgt caacgttagtaccgccgccgcagcGCGCTCTCTCGCCGCCGGAGCAGCTC GTCGTGCGCGAGCCCAACCTACGCACCGCCACAGCGCTGCGCCACACGCG CGCCAAGCGCGGCAAATGGCGCCACCTTGCCATGCTCAACCGCTCGCTCT CCGCCGCGCCCGACGCCGTGCTGCCGCACCAGCTGCCCGTCGACTACGCG CGCCCCAAACACACGCTGTCCGATTGCGCCTCTGCGTCGTGTGCGCGCTC GCCGCCGTCGGCGCCGCCCAGCGACTCTGCTTCCAACTCGGTCGTCGTCA CCGATTCGGAGCTCATCAACCGCCGCCCGACTCTCATCCGCCGCATTCTC TCGTCGCAAAAGCTCTCGCTGGaccgctaccagtgcccgctgccctgcgc gcgcccctctaccgctaccgctgctgccaccgctgctgctgccactagcg cCGTCGACAATAAGCTGGACCACGCATCTGCCAACCCGCGCAAGACGCTC TCTCTCTTCTCCAAGGACGGACCGCTACGACGCTCATTCCACCGCGTAGC CGATCGCGCCACCGCCGACGGCAACCACGCTATCAACTTTGCAAACTTGC AGTCGCAAAAGTTGCCTCCCAAAATCGCGCGAGAGCGCCAACGGCAACAA AAGCTGGCCGAGGCGGCTGCAAAACGCGGCGCGACGCGTGGGGGCATTTT CACTACTTGCAAGCTGGCGGCGGCCGAGCTAGCAGCGCACAATCAGCGCT ACCACTCGTCGCCACGGCTGGCGGCGCACATGTTGGAGACGCTGCAGACG TCGTTTGTGCCGCCCGTGTCGGAGGCGGCGCGGCTGGAGGAGCGCGCGGC GTGCTGTGGCGTGGAGGACGTTTTGGAACCGGTTTCAAGCCCGCCGTCTG TGGCGCGCAGTGGCATGGACATGTGTGGTATGATTGATGAACATGGCGAT GAGGTGCAGCGCGCGGAAAGTATGGAGTACGGGGATATGGAGAGTTTGGG GGGGGTGAGCCAACACCAGCTGAACCCGCTGAACCAGCTGCATGGCGTGT ACTCGAGGGGCCGCGCTGTGCCACTGGGCTTGTAG back to topprotein sequence of Gchil5810.t1 >Gchil5810.t1 ID=Gchil5810.t1|Name=Gchil5810.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=795bp
MDAPHRAHPHPHPHPHPSSNPHADASADAEPDADTEARALLAHHAAAASP LRYTAVHPPRVEGWLAKEARRSLRTRRTRYFTLDGTILASHRTKSAPASW HVSLADALVEPGPLPREIRLSLPTRTLSFVAPTPPAFRMWIVALRRASLF SSRVDHYYAVGRLIGEGMNGQVRLAHDRMTHEPVAIKMVPRLRRENETHF LAREVQILLSIAHPNIVRTLDVFVRTRRIHFVMEYLPGGELFDFISQNTH FTELHAAAVMTDLLNALHYLHTRNIVHRDVKLENLLCTSTTWPLNVKLAD FGFANYVNSRDRPILNSFVGTPYYIAPEMLRGDPHGCAVDVWATGVVLYI LLSGKFPFGGNNESEYYQRVLAKPAYFPADEWRDVSHDAKSLVRGMLCKD PHKRLTVEQCLRHPWLARRAHALPSPSSSPSPSSTLVPPPQRALSPPEQL VVREPNLRTATALRHTRAKRGKWRHLAMLNRSLSAAPDAVLPHQLPVDYA RPKHTLSDCASASCARSPPSAPPSDSASNSVVVTDSELINRRPTLIRRIL SSQKLSLDRYQCPLPCARPSTATAAATAAAATSAVDNKLDHASANPRKTL SLFSKDGPLRRSFHRVADRATADGNHAINFANLQSQKLPPKIARERQRQQ KLAEAAAKRGATRGGIFTTCKLAAAELAAHNQRYHSSPRLAAHMLETLQT SFVPPVSEAARLEERAACCGVEDVLEPVSSPPSVARSGMDMCGMIDEHGD EVQRAESMEYGDMESLGGVSQHQLNPLNQLHGVYSRGRAVPLGL* back to topmRNA from alignment at tig00004449_pilon:404986..407370+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil5810.t1 ID=Gchil5810.t1|Name=Gchil5810.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2385bp|location=Sequence derived from alignment at tig00004449_pilon:404986..407370+ (Gracilaria chilensis NLEC103_M9 male) ATGGACGCCCCCCATCGCGcccatccccatccccatccccatccccaccc
caGCTccaacccccacgccgacgccagcgccgacgccgaacccgacgccg
acACAGAAGCGCGCGCGCTGCTCGCCCACCACGCTGCCGCAGCCTCCCCC
CTGCGCTACACCGCCGTCCACCCGCCGCGCGTCGAGGGCTGGCTCGCCAA
GGAGGCCCGCCGTTCGCTCCGCACCCGACGCACACGCTATTTCACCCTAG
ACGGCACCATCCTCGCCTCGCATCGTACCAAGAGCGCCCCGGCCTCATGG
CACGTCTCTCTGGCCGATGCGCTCGTCGAGCCCGGCCCGTTACCGCGCGA
GATCCGACTGTCCTTGCCCACGCGCACCCTGTCCTTCGTCGCCCCGACAC
CCCCGGCCTTTCGCATGTGGATTGTTGCCCTGCGCCGCGCCTCGCTCTTC
AGCTCGCGTGTCGACCATTATTACGCCGTGGGCCGCCTCATCGGCGAGGG
AATGAACGGTCAGGTGCGTTTGGCCCACGACAGGATGACCCACGAGCCCG
TCGCCATCAAGATGGTCCCGCGCCTGCGCCGCGAGAACGAAACCCACTTC
CTGGCCCGCGAGGTGCAGATCCTGCTTTCCATTGCTCACCCCAACATCGT
GCGTACCCTCGACGTCTTTGTGCGCACCCGTCGCATCCACTTTGTCATGG
AGTATCTGCCCGGCGGCGAGCTCTTCGACTTTATCTCGCAAAACACCCAC
TTCACAGAGTTGCACGCCGCCGCCGTCATGACCGACCTGCTCAACGCCCT
GCACTatctgcacacgcgcaacattgtgcaccgcgacgtcaagctggaga
acctgctgtgcaccagcaccacgtggccgctcaacgtcaaactcgccgac
tttggctttgccaactacgtcaacagccgcgaccgccccatcctcaacag
ttttgtcggcacgccgtactacattgcgccggaaatgctgcgcggtgacc
cgcacggctgcgccgtcgacgtgtgggccACCGGCGTCGTGCTCTACATC
CTGCTCAGCGGCAAGTTCCCGTTTGGCGGCAACAACGAGTCCGAGTACTA
CCAGCGCGTGCTAGCCAAGCCCGCCTACTTCCCTGCTGACGAGTGGCGCG
ACGTGTCGCACGATGCCAAGAGCCTCGTGCGCGGCATGCTGTGCAAAGAT
CCCCACAAGCGTCTCACCGTGGAGCAATGTTTGCGCCACCCGTGGCTAGC
Gcgtcgcgcccacgcgttgccatcgccgtcgtcgtcgccgtcgccgtcgt
caacgttagtaccgccgccgcagcGCGCTCTCTCGCCGCCGGAGCAGCTC
GTCGTGCGCGAGCCCAACCTACGCACCGCCACAGCGCTGCGCCACACGCG
CGCCAAGCGCGGCAAATGGCGCCACCTTGCCATGCTCAACCGCTCGCTCT
CCGCCGCGCCCGACGCCGTGCTGCCGCACCAGCTGCCCGTCGACTACGCG
CGCCCCAAACACACGCTGTCCGATTGCGCCTCTGCGTCGTGTGCGCGCTC
GCCGCCGTCGGCGCCGCCCAGCGACTCTGCTTCCAACTCGGTCGTCGTCA
CCGATTCGGAGCTCATCAACCGCCGCCCGACTCTCATCCGCCGCATTCTC
TCGTCGCAAAAGCTCTCGCTGGaccgctaccagtgcccgctgccctgcgc
gcgcccctctaccgctaccgctgctgccaccgctgctgctgccactagcg
cCGTCGACAATAAGCTGGACCACGCATCTGCCAACCCGCGCAAGACGCTC
TCTCTCTTCTCCAAGGACGGACCGCTACGACGCTCATTCCACCGCGTAGC
CGATCGCGCCACCGCCGACGGCAACCACGCTATCAACTTTGCAAACTTGC
AGTCGCAAAAGTTGCCTCCCAAAATCGCGCGAGAGCGCCAACGGCAACAA
AAGCTGGCCGAGGCGGCTGCAAAACGCGGCGCGACGCGTGGGGGCATTTT
CACTACTTGCAAGCTGGCGGCGGCCGAGCTAGCAGCGCACAATCAGCGCT
ACCACTCGTCGCCACGGCTGGCGGCGCACATGTTGGAGACGCTGCAGACG
TCGTTTGTGCCGCCCGTGTCGGAGGCGGCGCGGCTGGAGGAGCGCGCGGC
GTGCTGTGGCGTGGAGGACGTTTTGGAACCGGTTTCAAGCCCGCCGTCTG
TGGCGCGCAGTGGCATGGACATGTGTGGTATGATTGATGAACATGGCGAT
GAGGTGCAGCGCGCGGAAAGTATGGAGTACGGGGATATGGAGAGTTTGGG
GGGGGTGAGCCAACACCAGCTGAACCCGCTGAACCAGCTGCATGGCGTGT
ACTCGAGGGGCCGCGCTGTGCCACTGGGCTTGTAG back to topCoding sequence (CDS) from alignment at tig00004449_pilon:404986..407370+ >Gchil5810.t1 ID=Gchil5810.t1|Name=Gchil5810.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2385bp|location=Sequence derived from alignment at tig00004449_pilon:404986..407370+ (Gracilaria chilensis NLEC103_M9 male) ATGGACGCCCCCCATCGCGcccatccccatccccatccccatccccaccc caGCTccaacccccacgccgacgccagcgccgacgccgaacccgacgccg acACAGAAGCGCGCGCGCTGCTCGCCCACCACGCTGCCGCAGCCTCCCCC CTGCGCTACACCGCCGTCCACCCGCCGCGCGTCGAGGGCTGGCTCGCCAA GGAGGCCCGCCGTTCGCTCCGCACCCGACGCACACGCTATTTCACCCTAG ACGGCACCATCCTCGCCTCGCATCGTACCAAGAGCGCCCCGGCCTCATGG CACGTCTCTCTGGCCGATGCGCTCGTCGAGCCCGGCCCGTTACCGCGCGA GATCCGACTGTCCTTGCCCACGCGCACCCTGTCCTTCGTCGCCCCGACAC CCCCGGCCTTTCGCATGTGGATTGTTGCCCTGCGCCGCGCCTCGCTCTTC AGCTCGCGTGTCGACCATTATTACGCCGTGGGCCGCCTCATCGGCGAGGG AATGAACGGTCAGGTGCGTTTGGCCCACGACAGGATGACCCACGAGCCCG TCGCCATCAAGATGGTCCCGCGCCTGCGCCGCGAGAACGAAACCCACTTC CTGGCCCGCGAGGTGCAGATCCTGCTTTCCATTGCTCACCCCAACATCGT GCGTACCCTCGACGTCTTTGTGCGCACCCGTCGCATCCACTTTGTCATGG AGTATCTGCCCGGCGGCGAGCTCTTCGACTTTATCTCGCAAAACACCCAC TTCACAGAGTTGCACGCCGCCGCCGTCATGACCGACCTGCTCAACGCCCT GCACTatctgcacacgcgcaacattgtgcaccgcgacgtcaagctggaga acctgctgtgcaccagcaccacgtggccgctcaacgtcaaactcgccgac tttggctttgccaactacgtcaacagccgcgaccgccccatcctcaacag ttttgtcggcacgccgtactacattgcgccggaaatgctgcgcggtgacc cgcacggctgcgccgtcgacgtgtgggccACCGGCGTCGTGCTCTACATC CTGCTCAGCGGCAAGTTCCCGTTTGGCGGCAACAACGAGTCCGAGTACTA CCAGCGCGTGCTAGCCAAGCCCGCCTACTTCCCTGCTGACGAGTGGCGCG ACGTGTCGCACGATGCCAAGAGCCTCGTGCGCGGCATGCTGTGCAAAGAT CCCCACAAGCGTCTCACCGTGGAGCAATGTTTGCGCCACCCGTGGCTAGC Gcgtcgcgcccacgcgttgccatcgccgtcgtcgtcgccgtcgccgtcgt caacgttagtaccgccgccgcagcGCGCTCTCTCGCCGCCGGAGCAGCTC GTCGTGCGCGAGCCCAACCTACGCACCGCCACAGCGCTGCGCCACACGCG CGCCAAGCGCGGCAAATGGCGCCACCTTGCCATGCTCAACCGCTCGCTCT CCGCCGCGCCCGACGCCGTGCTGCCGCACCAGCTGCCCGTCGACTACGCG CGCCCCAAACACACGCTGTCCGATTGCGCCTCTGCGTCGTGTGCGCGCTC GCCGCCGTCGGCGCCGCCCAGCGACTCTGCTTCCAACTCGGTCGTCGTCA CCGATTCGGAGCTCATCAACCGCCGCCCGACTCTCATCCGCCGCATTCTC TCGTCGCAAAAGCTCTCGCTGGaccgctaccagtgcccgctgccctgcgc gcgcccctctaccgctaccgctgctgccaccgctgctgctgccactagcg cCGTCGACAATAAGCTGGACCACGCATCTGCCAACCCGCGCAAGACGCTC TCTCTCTTCTCCAAGGACGGACCGCTACGACGCTCATTCCACCGCGTAGC CGATCGCGCCACCGCCGACGGCAACCACGCTATCAACTTTGCAAACTTGC AGTCGCAAAAGTTGCCTCCCAAAATCGCGCGAGAGCGCCAACGGCAACAA AAGCTGGCCGAGGCGGCTGCAAAACGCGGCGCGACGCGTGGGGGCATTTT CACTACTTGCAAGCTGGCGGCGGCCGAGCTAGCAGCGCACAATCAGCGCT ACCACTCGTCGCCACGGCTGGCGGCGCACATGTTGGAGACGCTGCAGACG TCGTTTGTGCCGCCCGTGTCGGAGGCGGCGCGGCTGGAGGAGCGCGCGGC GTGCTGTGGCGTGGAGGACGTTTTGGAACCGGTTTCAAGCCCGCCGTCTG TGGCGCGCAGTGGCATGGACATGTGTGGTATGATTGATGAACATGGCGAT GAGGTGCAGCGCGCGGAAAGTATGGAGTACGGGGATATGGAGAGTTTGGG GGGGGTGAGCCAACACCAGCTGAACCCGCTGAACCAGCTGCATGGCGTGT ACTCGAGGGGCCGCGCTGTGCCACTGGGCTTGTAG back to top
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