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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005705938.1 |
| PFAMs | tRNA-synt_1c,tRNA-synt_1c_C,tRNA_synt_1c_R1 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00055,RC00523 |
| KEGG ko | ko:K01886 |
| KEGG Reaction | R03652 |
| KEGG Pathway | ko00970,ko01100,map00970,map01100 |
| KEGG Module | M00359,M00360 |
| GOs | GO:0003674,GO:0003824,GO:0004812,GO:0004819,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006425,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 |
| Evalue | 3.3e-238 |
| EggNOG OGs | COG0008@1|root,KOG1148@2759|Eukaryota |
| EC | 6.1.1.18 |
| Description | glutaminyl-tRNA aminoacylation |
| COG category | J |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil5725.t1 ID=Gchil5725.t1|Name=Gchil5725.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=784bp MPSNSVNEISPEAQTRVATLEEYGLETRLAHTVGKSEKTTSTLLDAFNCA SLSPNPENGAEKAALLYTATTKLNSIVGKNGRTLLYSAIGTGKIDDSPHV EAAAAWLNAVYKAAGGSVPDAKIKLDDVPIDEEKFEHAAGVGVVVSYQDI KDAVNEAIEANKAELMEKRYRFNSGMMQRRVMEKLRFADGKVLNNLIRSG VEELLGPKTESDLAKPPKIKKAKAKKATVAKKAEQGTEEIADPFEGVPNR FEARGLSSAENTPELLEKHRKATGGKVVTRFPPEPNGYLHVGHAKAMFID FGYAKKMGGDCILRFDDTNPTVEKTEYIEGIIEMVTWMGHTPVRITYSSE YFEELYDLAVELIKRGKAYVCHQTGDEISKGRKEGTDSPWRDRSVEENIR LFDDMRKAKFAEGEATLRMKIDMNHPNLVMRDPVAYRVIHAPHPHIGDKW CVYPSYDYTHCIVDSLEWITHSLCTLEFEIRRDSYYWLLEALDLYRPFVW ESSRLNLEYTVMSKRKLKLLVMQGYVRGWDDPRMPTLVGMRRRGYSPSSL NRFCNAIGVSRANNVIGMHVLEHWVRTDHDSNCKRVLAVLRPLKVTISNF KENERLSVSNHPKKEEMGKREVMLTKTVYIERTDFRLTDEKGYYGLAPNK SAMLRYAYPIKVTGVVKENGEVAELIAEMDYGKSTKPKGVLHWVGENAIP FEARLYSTLFKSPDPSLLKDDWLTDLNKESEIVLKNSLIEKSAKDSKVGD TYQFERTGYFTADTDSTSENMIFNMTVSLRDSR* back to topspliced messenger RNA >Gchil5725.t1 ID=Gchil5725.t1|Name=Gchil5725.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2352bp|location=Sequence derived from alignment at tig00000015_pilon:1122989..1125340- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGCCTTCAAACTCGGTCAACGAAATCTCTCCCGAAGCCCAGACGCGAGT TGCCACTTTAGAAGAGTACGGTCTCGAAACACGTTTGGCTCACACAGTTG GAAAGAGTGAAAAGACCACCAGCACTCTTCTCGATGCATTCAATTGCGCT TCACTGAGTCCAAATCCAGAGAATGGAGCGGAAAAAGCTGCCTTGTTATA TACTGCAACAACAAAGCTCAACTCAATCGTTGGGAAGAATGGACGTACTC TTCTCTACAGCGCCATTGGAACTGGAAAGATAGATGACTCTCCTCACGTA GAAGCTGCCGCTGCGTGGTTGAATGCTGTCTACAAGGCGGCGGGGGGCTC AGTTCCAGATGCTAAAATCAAGTTAGATGATGTGCCTATCGATGAGGAAA AGTTTGAGCATGCTGCTGGTGTGGGCGTTGTGGTTTCATATCAGGACATT AAGGATGCTGTTAATGAAGCAATCGAAGCAAACAAAGCTGAACTCATGGA AAAGCGATACCGCTTCAATTCGGGCATGATGCAGAGAAGAGTAATGGAGA AACTTCGATTTGCAGATGGAAAAGTCCTTAATAACCTCATACGTTCTGGT GTAGAAGAGCTTCTCGGTCCTAAGACTGAGTCGGACTTGGCCAAACCACC CAAAATTAAGAAGGCGAAAGCGAAAAAGGCAACTGTTGCGAAGAAGGCGG AGCAAGGAACCGAGGAGATTGCTGATCCGTTTGAAGGCGTGCCAAATAGA TTCGAAGCCCGAGGGCTGTCGAGCGCCGAGAACACACCCGAACTGCTCGA GAAGCACCGAAAGGCAACCGGCGGGAAAGTGGTGACGAGGTTTCCTCCAG AGCCAAACGGATACCTACATGTTGGTCACGCGAAAGCTATGTTTATCGAT TTTGGATATGCCAAGAAAATGGGAGGAGATTGTATTCTTCGCTTCGATGA CACAAATCCAACGGTGGAAAAAACCGAGTACATTGAGGGAATTATAGAAA TGGTGACATGGATGGGGCACACACCAGTCCGCATCACATACAGCTCTGAG TACTTTGAAGAACTGTACGATCTTGCTGTTGAACTTATCAAGCGGGGAAA GGCGTACGTGTGTCACCAGACAGGAGACGAGATATCGAAGGGCCGAAAGG AAGGCACTGATTCACCTTGGCGAGATAGAAGCGTAGAGGAAAATATACGT CTATTTGACGACATGCGCAAGGCAAAGTTCGCAGAAGGGGAAGCCACTCT TCGAATGAAGATTGATATGAACCATCCAAATTTGGTCATGCGTGACCCAG TTGCATACCGAGTCATCCACGCCCCTCATCCTCATATCGGAGACAAGTGG TGCGTGTATCCTTCATACGACTACACCCACTGCATCGTTGACTCGTTGGA ATGGATTACCCATTCTCTGTGCACCCTGGAATTCGAGATTAGGCGCGATT CATATTACTGGCTGTTAGAAGCGCTTGACCTTTATCGACCGTTCGTATGG GAATCGTCGAGGCTCAACCTCGAATACACGGTTATGTCAAAACGAAAGTT GAAGCTGCTGGTAATGCAGGGATATGTCCGCGGATGGGATGATCCACGGA TGCCGACTTTGGTTGGAATGAGACGTCGTGGGTACTCACCGAGCTCGCTC AATCGTTTCTGCAATGCCATAGGCGTTTCTAGAGCGAATAACGTGATTGG TATGCACGTCTTAGAACATTGGGTTCGAACGGATCACGATTCAAATTGCA AGAGGGTGTTGGCTGTGCTTCGACCCTTGAAGGTAACCATCAGCAACTTC AAAGAAAACGAACGGCTGAGTGTCTCGAATCATCCGAAGAAGGAGGAAAT GGGCAAACGCGAAGTGATGTTAACCAAGACTGTCTATATCGAGAGAACTG ATTTCAGATTGACTGACGAAAAAGGATATTATGGTCTAGCGCCCAACAAA AGCGCTATGTTGCGCTATGCCTACCCCATCAAGGTTACCGGTGTAGTTAA AGAAAATGGAGAGGTCGCGGAATTGATCGCCGAAATGGACTACGGCAAGT CAACAAAACCAAAGGGTGTACTCCATTGGGTTGGGGAGAACGCAATTCCC TTCGAGGCTCGTCTGTATAGTACTCTCTTCAAGAGCCCGGACCCTTCACT TCTAAAGGACGATTGGCTGACTGATTTGAACAAAGAAAGCGAGATTGTTT TGAAAAATTCTCTGATAGAGAAGAGTGCCAAGGACTCGAAAGTTGGTGAC ACTTACCAATTTGAACGAACGGGATATTTTACGGCAGATACGGACAGCAC GTCTGAGAATATGATATTTAACATGACCGTCTCACTACGGGACTCGCGCT GA back to topprotein sequence of Gchil5725.t1 >Gchil5725.t1 ID=Gchil5725.t1|Name=Gchil5725.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=784bp
MPSNSVNEISPEAQTRVATLEEYGLETRLAHTVGKSEKTTSTLLDAFNCA SLSPNPENGAEKAALLYTATTKLNSIVGKNGRTLLYSAIGTGKIDDSPHV EAAAAWLNAVYKAAGGSVPDAKIKLDDVPIDEEKFEHAAGVGVVVSYQDI KDAVNEAIEANKAELMEKRYRFNSGMMQRRVMEKLRFADGKVLNNLIRSG VEELLGPKTESDLAKPPKIKKAKAKKATVAKKAEQGTEEIADPFEGVPNR FEARGLSSAENTPELLEKHRKATGGKVVTRFPPEPNGYLHVGHAKAMFID FGYAKKMGGDCILRFDDTNPTVEKTEYIEGIIEMVTWMGHTPVRITYSSE YFEELYDLAVELIKRGKAYVCHQTGDEISKGRKEGTDSPWRDRSVEENIR LFDDMRKAKFAEGEATLRMKIDMNHPNLVMRDPVAYRVIHAPHPHIGDKW CVYPSYDYTHCIVDSLEWITHSLCTLEFEIRRDSYYWLLEALDLYRPFVW ESSRLNLEYTVMSKRKLKLLVMQGYVRGWDDPRMPTLVGMRRRGYSPSSL NRFCNAIGVSRANNVIGMHVLEHWVRTDHDSNCKRVLAVLRPLKVTISNF KENERLSVSNHPKKEEMGKREVMLTKTVYIERTDFRLTDEKGYYGLAPNK SAMLRYAYPIKVTGVVKENGEVAELIAEMDYGKSTKPKGVLHWVGENAIP FEARLYSTLFKSPDPSLLKDDWLTDLNKESEIVLKNSLIEKSAKDSKVGD TYQFERTGYFTADTDSTSENMIFNMTVSLRDSR* back to topmRNA from alignment at tig00000015_pilon:1122989..1125340- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil5725.t1 ID=Gchil5725.t1|Name=Gchil5725.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2352bp|location=Sequence derived from alignment at tig00000015_pilon:1122989..1125340- (Gracilaria chilensis NLEC103_M9 male) ATGCCTTCAAACTCGGTCAACGAAATCTCTCCCGAAGCCCAGACGCGAGT
TGCCACTTTAGAAGAGTACGGTCTCGAAACACGTTTGGCTCACACAGTTG
GAAAGAGTGAAAAGACCACCAGCACTCTTCTCGATGCATTCAATTGCGCT
TCACTGAGTCCAAATCCAGAGAATGGAGCGGAAAAAGCTGCCTTGTTATA
TACTGCAACAACAAAGCTCAACTCAATCGTTGGGAAGAATGGACGTACTC
TTCTCTACAGCGCCATTGGAACTGGAAAGATAGATGACTCTCCTCACGTA
GAAGCTGCCGCTGCGTGGTTGAATGCTGTCTACAAGGCGGCGGGGGGCTC
AGTTCCAGATGCTAAAATCAAGTTAGATGATGTGCCTATCGATGAGGAAA
AGTTTGAGCATGCTGCTGGTGTGGGCGTTGTGGTTTCATATCAGGACATT
AAGGATGCTGTTAATGAAGCAATCGAAGCAAACAAAGCTGAACTCATGGA
AAAGCGATACCGCTTCAATTCGGGCATGATGCAGAGAAGAGTAATGGAGA
AACTTCGATTTGCAGATGGAAAAGTCCTTAATAACCTCATACGTTCTGGT
GTAGAAGAGCTTCTCGGTCCTAAGACTGAGTCGGACTTGGCCAAACCACC
CAAAATTAAGAAGGCGAAAGCGAAAAAGGCAACTGTTGCGAAGAAGGCGG
AGCAAGGAACCGAGGAGATTGCTGATCCGTTTGAAGGCGTGCCAAATAGA
TTCGAAGCCCGAGGGCTGTCGAGCGCCGAGAACACACCCGAACTGCTCGA
GAAGCACCGAAAGGCAACCGGCGGGAAAGTGGTGACGAGGTTTCCTCCAG
AGCCAAACGGATACCTACATGTTGGTCACGCGAAAGCTATGTTTATCGAT
TTTGGATATGCCAAGAAAATGGGAGGAGATTGTATTCTTCGCTTCGATGA
CACAAATCCAACGGTGGAAAAAACCGAGTACATTGAGGGAATTATAGAAA
TGGTGACATGGATGGGGCACACACCAGTCCGCATCACATACAGCTCTGAG
TACTTTGAAGAACTGTACGATCTTGCTGTTGAACTTATCAAGCGGGGAAA
GGCGTACGTGTGTCACCAGACAGGAGACGAGATATCGAAGGGCCGAAAGG
AAGGCACTGATTCACCTTGGCGAGATAGAAGCGTAGAGGAAAATATACGT
CTATTTGACGACATGCGCAAGGCAAAGTTCGCAGAAGGGGAAGCCACTCT
TCGAATGAAGATTGATATGAACCATCCAAATTTGGTCATGCGTGACCCAG
TTGCATACCGAGTCATCCACGCCCCTCATCCTCATATCGGAGACAAGTGG
TGCGTGTATCCTTCATACGACTACACCCACTGCATCGTTGACTCGTTGGA
ATGGATTACCCATTCTCTGTGCACCCTGGAATTCGAGATTAGGCGCGATT
CATATTACTGGCTGTTAGAAGCGCTTGACCTTTATCGACCGTTCGTATGG
GAATCGTCGAGGCTCAACCTCGAATACACGGTTATGTCAAAACGAAAGTT
GAAGCTGCTGGTAATGCAGGGATATGTCCGCGGATGGGATGATCCACGGA
TGCCGACTTTGGTTGGAATGAGACGTCGTGGGTACTCACCGAGCTCGCTC
AATCGTTTCTGCAATGCCATAGGCGTTTCTAGAGCGAATAACGTGATTGG
TATGCACGTCTTAGAACATTGGGTTCGAACGGATCACGATTCAAATTGCA
AGAGGGTGTTGGCTGTGCTTCGACCCTTGAAGGTAACCATCAGCAACTTC
AAAGAAAACGAACGGCTGAGTGTCTCGAATCATCCGAAGAAGGAGGAAAT
GGGCAAACGCGAAGTGATGTTAACCAAGACTGTCTATATCGAGAGAACTG
ATTTCAGATTGACTGACGAAAAAGGATATTATGGTCTAGCGCCCAACAAA
AGCGCTATGTTGCGCTATGCCTACCCCATCAAGGTTACCGGTGTAGTTAA
AGAAAATGGAGAGGTCGCGGAATTGATCGCCGAAATGGACTACGGCAAGT
CAACAAAACCAAAGGGTGTACTCCATTGGGTTGGGGAGAACGCAATTCCC
TTCGAGGCTCGTCTGTATAGTACTCTCTTCAAGAGCCCGGACCCTTCACT
TCTAAAGGACGATTGGCTGACTGATTTGAACAAAGAAAGCGAGATTGTTT
TGAAAAATTCTCTGATAGAGAAGAGTGCCAAGGACTCGAAAGTTGGTGAC
ACTTACCAATTTGAACGAACGGGATATTTTACGGCAGATACGGACAGCAC
GTCTGAGAATATGATATTTAACATGACCGTCTCACTACGGGACTCGCGCT
GA back to topCoding sequence (CDS) from alignment at tig00000015_pilon:1122989..1125340- >Gchil5725.t1 ID=Gchil5725.t1|Name=Gchil5725.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2352bp|location=Sequence derived from alignment at tig00000015_pilon:1122989..1125340- (Gracilaria chilensis NLEC103_M9 male) ATGCCTTCAAACTCGGTCAACGAAATCTCTCCCGAAGCCCAGACGCGAGT TGCCACTTTAGAAGAGTACGGTCTCGAAACACGTTTGGCTCACACAGTTG GAAAGAGTGAAAAGACCACCAGCACTCTTCTCGATGCATTCAATTGCGCT TCACTGAGTCCAAATCCAGAGAATGGAGCGGAAAAAGCTGCCTTGTTATA TACTGCAACAACAAAGCTCAACTCAATCGTTGGGAAGAATGGACGTACTC TTCTCTACAGCGCCATTGGAACTGGAAAGATAGATGACTCTCCTCACGTA GAAGCTGCCGCTGCGTGGTTGAATGCTGTCTACAAGGCGGCGGGGGGCTC AGTTCCAGATGCTAAAATCAAGTTAGATGATGTGCCTATCGATGAGGAAA AGTTTGAGCATGCTGCTGGTGTGGGCGTTGTGGTTTCATATCAGGACATT AAGGATGCTGTTAATGAAGCAATCGAAGCAAACAAAGCTGAACTCATGGA AAAGCGATACCGCTTCAATTCGGGCATGATGCAGAGAAGAGTAATGGAGA AACTTCGATTTGCAGATGGAAAAGTCCTTAATAACCTCATACGTTCTGGT GTAGAAGAGCTTCTCGGTCCTAAGACTGAGTCGGACTTGGCCAAACCACC CAAAATTAAGAAGGCGAAAGCGAAAAAGGCAACTGTTGCGAAGAAGGCGG AGCAAGGAACCGAGGAGATTGCTGATCCGTTTGAAGGCGTGCCAAATAGA TTCGAAGCCCGAGGGCTGTCGAGCGCCGAGAACACACCCGAACTGCTCGA GAAGCACCGAAAGGCAACCGGCGGGAAAGTGGTGACGAGGTTTCCTCCAG AGCCAAACGGATACCTACATGTTGGTCACGCGAAAGCTATGTTTATCGAT TTTGGATATGCCAAGAAAATGGGAGGAGATTGTATTCTTCGCTTCGATGA CACAAATCCAACGGTGGAAAAAACCGAGTACATTGAGGGAATTATAGAAA TGGTGACATGGATGGGGCACACACCAGTCCGCATCACATACAGCTCTGAG TACTTTGAAGAACTGTACGATCTTGCTGTTGAACTTATCAAGCGGGGAAA GGCGTACGTGTGTCACCAGACAGGAGACGAGATATCGAAGGGCCGAAAGG AAGGCACTGATTCACCTTGGCGAGATAGAAGCGTAGAGGAAAATATACGT CTATTTGACGACATGCGCAAGGCAAAGTTCGCAGAAGGGGAAGCCACTCT TCGAATGAAGATTGATATGAACCATCCAAATTTGGTCATGCGTGACCCAG TTGCATACCGAGTCATCCACGCCCCTCATCCTCATATCGGAGACAAGTGG TGCGTGTATCCTTCATACGACTACACCCACTGCATCGTTGACTCGTTGGA ATGGATTACCCATTCTCTGTGCACCCTGGAATTCGAGATTAGGCGCGATT CATATTACTGGCTGTTAGAAGCGCTTGACCTTTATCGACCGTTCGTATGG GAATCGTCGAGGCTCAACCTCGAATACACGGTTATGTCAAAACGAAAGTT GAAGCTGCTGGTAATGCAGGGATATGTCCGCGGATGGGATGATCCACGGA TGCCGACTTTGGTTGGAATGAGACGTCGTGGGTACTCACCGAGCTCGCTC AATCGTTTCTGCAATGCCATAGGCGTTTCTAGAGCGAATAACGTGATTGG TATGCACGTCTTAGAACATTGGGTTCGAACGGATCACGATTCAAATTGCA AGAGGGTGTTGGCTGTGCTTCGACCCTTGAAGGTAACCATCAGCAACTTC AAAGAAAACGAACGGCTGAGTGTCTCGAATCATCCGAAGAAGGAGGAAAT GGGCAAACGCGAAGTGATGTTAACCAAGACTGTCTATATCGAGAGAACTG ATTTCAGATTGACTGACGAAAAAGGATATTATGGTCTAGCGCCCAACAAA AGCGCTATGTTGCGCTATGCCTACCCCATCAAGGTTACCGGTGTAGTTAA AGAAAATGGAGAGGTCGCGGAATTGATCGCCGAAATGGACTACGGCAAGT CAACAAAACCAAAGGGTGTACTCCATTGGGTTGGGGAGAACGCAATTCCC TTCGAGGCTCGTCTGTATAGTACTCTCTTCAAGAGCCCGGACCCTTCACT TCTAAAGGACGATTGGCTGACTGATTTGAACAAAGAAAGCGAGATTGTTT TGAAAAATTCTCTGATAGAGAAGAGTGCCAAGGACTCGAAAGTTGGTGAC ACTTACCAATTTGAACGAACGGGATATTTTACGGCAGATACGGACAGCAC GTCTGAGAATATGATATTTAACATGACCGTCTCACTACGGGACTCGCGCT GA back to top
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