Gchil4594.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil4594.t1
Unique NameGchil4594.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length737
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004426_piloncontigtig00004426_pilon:1601552..1603762 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4594Gchil4594Gracilaria chilensis NLEC103_M9 malegenetig00004426_pilon 1601552..1603762 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4594.t1.stop1Gchil4594.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004426_pilon 1601552..1601554 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4594.t1.CDS1Gchil4594.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004426_pilon 1601552..1603762 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4594.t1.exon1Gchil4594.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004426_pilon 1601552..1603762 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4594.t1.start1Gchil4594.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004426_pilon 1603760..1603762 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4594.t1Gchil4594.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004426_pilon 1601552..1603762 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil4594.t1 ID=Gchil4594.t1|Name=Gchil4594.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=737bp
MTGSISKKELRSDLVSFLVTRFLYASNAGVLKFPCYPDVRQYKEVDHGGD
EVSFRVARRKINGQMYGALRLITQILPEVSAVFILSCLVRLISLRPSSVG
INVSAGPRELGIVCPDSDAQSWNFGDFHGDRRTWRHCIDTTCPTVDSICQ
VAVETVQDPIRTQMVAMQKQAFESITTWTDVDLLVPKAHTLRVLFLLYVA
EPQKLDACIEALGSLIDNPETPSMARTRSCVALRAVYQRLSRSQGAHIGR
FANLWCDYAVNTLLNPKFREQDKTQLVEASISCVMSIPDVKEAEQKIERI
LMPLVDTLSPAKALAVLQSPVTFLDFLMKGPADDVTPIICAFYVFSNSMH
QISRPMAKRSKTTLTPGILSHAIAPKAVEVTSYMVSTLHAFYSRAKFPRD
NADKLRRNILLPTCKDLVHIVNLDNKEVIRRVTDEHDSYEDVQKGFREGP
SVHEERSYDILCSYGIQPPDPQFAWIRETFQNLRTCGYEIIRACVLSGVT
KSPEHLRVILRAICTDVQYMEPLHLLMLISRIISPLLSFSIVSTDPSFLE
LVGQSDVPKLLHRVREHINVSIKGAQTFNETSTLDISRDCGRAWLRRAAA
NLISGIYPVFTEKTDSDGPQMEEFFPFPFQVPLLGEALIALWTTVCSPGQ
DANIRNSFQYAFNTGLHAAELSPRANFQFFAPLLDVCFKAAVLNAGDTNA
TADCPVNATLAVIRKWPVESERQLHATLGHNRVLQE*
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spliced messenger RNA

>Gchil4594.t1 ID=Gchil4594.t1|Name=Gchil4594.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2211bp|location=Sequence derived from alignment at tig00004426_pilon:1601552..1603762- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTGGCTCTATTTCTAAAAAGGAGCTTCGCTCCGACCTTGTTTCGTT
TCTTGTCACTCGCTTTCTGTACGCCTCTAACGCTGGCGTTTTGAAATTCC
CATGCTATCCTGACGTAAGACAGTATAAAGAAGTTGACCATGGTGGTGAT
GAAGTTTCGTTTCGAGTGGCCCGCAGGAAAATCAATGGACAGATGTACGG
TGCACTCCGGTTAATCACTCAAATCCTGCCAGAAGTGAGCGCAGTTTTCA
TTCTTTCGTGCCTGGTTCGTCTGATTTCGCTGCGTCCTTCCTCTGTGGGA
ATTAATGTGAGTGCCGGGCCCCGCGAGTTGGGAATCGTATGCCCTGATTC
TGATGCCCAGAGCTGGAATTTTGGAGACTTTCACGGAGACAGAAGAACTT
GGCGGCATTGCATTGATACGACATGCCCCACTGTCGATTCTATCTGTCAA
GTCGCAGTGGAGACGGTTCAGGATCCAATAAGGACACAAATGGTGGCAAT
GCAAAAACAAGCGTTCGAATCAATCACCACATGGACGGATGTAGATTTGC
TCGTCCCTAAAGCTCATACACTACGAGTATTGTTCCTGTTGTACGTGGCG
GAGCCGCAAAAGCTAGATGCATGTATTGAAGCACTTGGAAGTTTAATTGA
TAACCCAGAGACACCGAGTATGGCGCGGACCAGATCGTGTGTTGCTTTGC
GTGCTGTTTATCAACGTTTGAGTCGCTCACAGGGTGCTCACATTGGCCGT
TTCGCGAATTTGTGGTGCGATTACGCAGTGAATACGCTACTTAACCCCAA
GTTTCGTGAACAAGACAAGACACAGCTTGTAGAGGCGAGCATCTCTTGCG
TCATGTCCATACCTGATGTTAAGGAAGCGGAACAGAAGATTGAACGCATA
CTGATGCCGCTCGTCGACACCCTGTCACCTGCTAAAGCTCTTGCTGTGCT
CCAGTCCCCTGTTACATTTCTGGACTTTCTCATGAAGGGACCAGCCGATG
ATGTGACGCCAATTATCTGTGCTTTTTATGTGTTCTCGAACAGTATGCAC
CAGATATCTCGCCCCATGGCCAAGCGTTCCAAGACCACCCTCACCCCTGG
TATACTGTCACATGCCATCGCTCCAAAGGCCGTGGAGGTAACCAGTTACA
TGGTTTCTACTTTACATGCATTCTATAGCCGGGCCAAATTTCCTCGTGAC
AATGCTGATAAACTTCGCCGAAACATTTTGCTACCGACGTGCAAAGATTT
GGTCCATATCGTCAACTTGGACAACAAAGAGGTCATAAGGAGAGTCACAG
ATGAACACGACTCGTACGAAGATGTTCAAAAGGGTTTTAGAGAAGGGCCT
TCTGTTCACGAAGAACGAAGCTACGACATTTTGTGCAGTTATGGGATCCA
ACCTCCTGATCCCCAGTTCGCCTGGATACGTGAGACGTTTCAAAACTTAC
GCACTTGCGGATACGAAATCATCCGGGCATGCGTCTTATCAGGTGTGACA
AAGTCTCCCGAACACTTGAGAGTAATATTGCGAGCCATCTGTACCGACGT
TCAATACATGGAACCATTGCATTTGTTGATGCTCATCTCTCGCATCATAT
CTCCGTTATTATCGTTTTCTATTGTCTCTACAGATCCCTCTTTTTTGGAG
CTCGTGGGCCAGTCCGATGTTCCGAAGCTTCTTCATCGTGTACGAGAGCA
CATTAATGTTTCGATAAAGGGAGCTCAGACATTCAACGAAACTTCTACGC
TAGACATATCCCGTGACTGTGGTAGAGCCTGGTTGCGCAGAGCTGCCGCG
AATTTGATTTCGGGGATATACCCAGTGTTCACTGAGAAGACTGATTCAGA
TGGCCCTCAAATGGAGGAGTTTTTTCCATTTCCCTTTCAGGTTCCGCTCC
TTGGTGAGGCTCTTATTGCACTGTGGACCACGGTCTGCAGTCCAGGACAA
GACGCTAACATTAGGAATTCCTTTCAGTACGCTTTCAATACTGGCTTACA
CGCTGCCGAACTTTCTCCACGGGCCAACTTCCAGTTTTTCGCACCACTTT
TGGACGTATGTTTTAAGGCCGCTGTACTGAATGCCGGTGATACGAATGCA
ACTGCAGATTGTCCTGTTAATGCAACACTAGCGGTCATTAGGAAATGGCC
TGTTGAAAGCGAGCGTCAATTACACGCTACTCTGGGACATAATAGAGTTT
TGCAGGAATAG
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protein sequence of Gchil4594.t1

>Gchil4594.t1 ID=Gchil4594.t1|Name=Gchil4594.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=737bp
MTGSISKKELRSDLVSFLVTRFLYASNAGVLKFPCYPDVRQYKEVDHGGD
EVSFRVARRKINGQMYGALRLITQILPEVSAVFILSCLVRLISLRPSSVG
INVSAGPRELGIVCPDSDAQSWNFGDFHGDRRTWRHCIDTTCPTVDSICQ
VAVETVQDPIRTQMVAMQKQAFESITTWTDVDLLVPKAHTLRVLFLLYVA
EPQKLDACIEALGSLIDNPETPSMARTRSCVALRAVYQRLSRSQGAHIGR
FANLWCDYAVNTLLNPKFREQDKTQLVEASISCVMSIPDVKEAEQKIERI
LMPLVDTLSPAKALAVLQSPVTFLDFLMKGPADDVTPIICAFYVFSNSMH
QISRPMAKRSKTTLTPGILSHAIAPKAVEVTSYMVSTLHAFYSRAKFPRD
NADKLRRNILLPTCKDLVHIVNLDNKEVIRRVTDEHDSYEDVQKGFREGP
SVHEERSYDILCSYGIQPPDPQFAWIRETFQNLRTCGYEIIRACVLSGVT
KSPEHLRVILRAICTDVQYMEPLHLLMLISRIISPLLSFSIVSTDPSFLE
LVGQSDVPKLLHRVREHINVSIKGAQTFNETSTLDISRDCGRAWLRRAAA
NLISGIYPVFTEKTDSDGPQMEEFFPFPFQVPLLGEALIALWTTVCSPGQ
DANIRNSFQYAFNTGLHAAELSPRANFQFFAPLLDVCFKAAVLNAGDTNA
TADCPVNATLAVIRKWPVESERQLHATLGHNRVLQE*
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mRNA from alignment at tig00004426_pilon:1601552..1603762-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil4594.t1 ID=Gchil4594.t1|Name=Gchil4594.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2211bp|location=Sequence derived from alignment at tig00004426_pilon:1601552..1603762- (Gracilaria chilensis NLEC103_M9 male)
ATGACTGGCTCTATTTCTAAAAAGGAGCTTCGCTCCGACCTTGTTTCGTT
TCTTGTCACTCGCTTTCTGTACGCCTCTAACGCTGGCGTTTTGAAATTCC
CATGCTATCCTGACGTAAGACAGTATAAAGAAGTTGACCATGGTGGTGAT
GAAGTTTCGTTTCGAGTGGCCCGCAGGAAAATCAATGGACAGATGTACGG
TGCACTCCGGTTAATCACTCAAATCCTGCCAGAAGTGAGCGCAGTTTTCA
TTCTTTCGTGCCTGGTTCGTCTGATTTCGCTGCGTCCTTCCTCTGTGGGA
ATTAATGTGAGTGCCGGGCCCCGCGAGTTGGGAATCGTATGCCCTGATTC
TGATGCCCAGAGCTGGAATTTTGGAGACTTTCACGGAGACAGAAGAACTT
GGCGGCATTGCATTGATACGACATGCCCCACTGTCGATTCTATCTGTCAA
GTCGCAGTGGAGACGGTTCAGGATCCAATAAGGACACAAATGGTGGCAAT
GCAAAAACAAGCGTTCGAATCAATCACCACATGGACGGATGTAGATTTGC
TCGTCCCTAAAGCTCATACACTACGAGTATTGTTCCTGTTGTACGTGGCG
GAGCCGCAAAAGCTAGATGCATGTATTGAAGCACTTGGAAGTTTAATTGA
TAACCCAGAGACACCGAGTATGGCGCGGACCAGATCGTGTGTTGCTTTGC
GTGCTGTTTATCAACGTTTGAGTCGCTCACAGGGTGCTCACATTGGCCGT
TTCGCGAATTTGTGGTGCGATTACGCAGTGAATACGCTACTTAACCCCAA
GTTTCGTGAACAAGACAAGACACAGCTTGTAGAGGCGAGCATCTCTTGCG
TCATGTCCATACCTGATGTTAAGGAAGCGGAACAGAAGATTGAACGCATA
CTGATGCCGCTCGTCGACACCCTGTCACCTGCTAAAGCTCTTGCTGTGCT
CCAGTCCCCTGTTACATTTCTGGACTTTCTCATGAAGGGACCAGCCGATG
ATGTGACGCCAATTATCTGTGCTTTTTATGTGTTCTCGAACAGTATGCAC
CAGATATCTCGCCCCATGGCCAAGCGTTCCAAGACCACCCTCACCCCTGG
TATACTGTCACATGCCATCGCTCCAAAGGCCGTGGAGGTAACCAGTTACA
TGGTTTCTACTTTACATGCATTCTATAGCCGGGCCAAATTTCCTCGTGAC
AATGCTGATAAACTTCGCCGAAACATTTTGCTACCGACGTGCAAAGATTT
GGTCCATATCGTCAACTTGGACAACAAAGAGGTCATAAGGAGAGTCACAG
ATGAACACGACTCGTACGAAGATGTTCAAAAGGGTTTTAGAGAAGGGCCT
TCTGTTCACGAAGAACGAAGCTACGACATTTTGTGCAGTTATGGGATCCA
ACCTCCTGATCCCCAGTTCGCCTGGATACGTGAGACGTTTCAAAACTTAC
GCACTTGCGGATACGAAATCATCCGGGCATGCGTCTTATCAGGTGTGACA
AAGTCTCCCGAACACTTGAGAGTAATATTGCGAGCCATCTGTACCGACGT
TCAATACATGGAACCATTGCATTTGTTGATGCTCATCTCTCGCATCATAT
CTCCGTTATTATCGTTTTCTATTGTCTCTACAGATCCCTCTTTTTTGGAG
CTCGTGGGCCAGTCCGATGTTCCGAAGCTTCTTCATCGTGTACGAGAGCA
CATTAATGTTTCGATAAAGGGAGCTCAGACATTCAACGAAACTTCTACGC
TAGACATATCCCGTGACTGTGGTAGAGCCTGGTTGCGCAGAGCTGCCGCG
AATTTGATTTCGGGGATATACCCAGTGTTCACTGAGAAGACTGATTCAGA
TGGCCCTCAAATGGAGGAGTTTTTTCCATTTCCCTTTCAGGTTCCGCTCC
TTGGTGAGGCTCTTATTGCACTGTGGACCACGGTCTGCAGTCCAGGACAA
GACGCTAACATTAGGAATTCCTTTCAGTACGCTTTCAATACTGGCTTACA
CGCTGCCGAACTTTCTCCACGGGCCAACTTCCAGTTTTTCGCACCACTTT
TGGACGTATGTTTTAAGGCCGCTGTACTGAATGCCGGTGATACGAATGCA
ACTGCAGATTGTCCTGTTAATGCAACACTAGCGGTCATTAGGAAATGGCC
TGTTGAAAGCGAGCGTCAATTACACGCTACTCTGGGACATAATAGAGTTT
TGCAGGAATAG
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Coding sequence (CDS) from alignment at tig00004426_pilon:1601552..1603762-

>Gchil4594.t1 ID=Gchil4594.t1|Name=Gchil4594.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2211bp|location=Sequence derived from alignment at tig00004426_pilon:1601552..1603762- (Gracilaria chilensis NLEC103_M9 male)
ATGACTGGCTCTATTTCTAAAAAGGAGCTTCGCTCCGACCTTGTTTCGTT
TCTTGTCACTCGCTTTCTGTACGCCTCTAACGCTGGCGTTTTGAAATTCC
CATGCTATCCTGACGTAAGACAGTATAAAGAAGTTGACCATGGTGGTGAT
GAAGTTTCGTTTCGAGTGGCCCGCAGGAAAATCAATGGACAGATGTACGG
TGCACTCCGGTTAATCACTCAAATCCTGCCAGAAGTGAGCGCAGTTTTCA
TTCTTTCGTGCCTGGTTCGTCTGATTTCGCTGCGTCCTTCCTCTGTGGGA
ATTAATGTGAGTGCCGGGCCCCGCGAGTTGGGAATCGTATGCCCTGATTC
TGATGCCCAGAGCTGGAATTTTGGAGACTTTCACGGAGACAGAAGAACTT
GGCGGCATTGCATTGATACGACATGCCCCACTGTCGATTCTATCTGTCAA
GTCGCAGTGGAGACGGTTCAGGATCCAATAAGGACACAAATGGTGGCAAT
GCAAAAACAAGCGTTCGAATCAATCACCACATGGACGGATGTAGATTTGC
TCGTCCCTAAAGCTCATACACTACGAGTATTGTTCCTGTTGTACGTGGCG
GAGCCGCAAAAGCTAGATGCATGTATTGAAGCACTTGGAAGTTTAATTGA
TAACCCAGAGACACCGAGTATGGCGCGGACCAGATCGTGTGTTGCTTTGC
GTGCTGTTTATCAACGTTTGAGTCGCTCACAGGGTGCTCACATTGGCCGT
TTCGCGAATTTGTGGTGCGATTACGCAGTGAATACGCTACTTAACCCCAA
GTTTCGTGAACAAGACAAGACACAGCTTGTAGAGGCGAGCATCTCTTGCG
TCATGTCCATACCTGATGTTAAGGAAGCGGAACAGAAGATTGAACGCATA
CTGATGCCGCTCGTCGACACCCTGTCACCTGCTAAAGCTCTTGCTGTGCT
CCAGTCCCCTGTTACATTTCTGGACTTTCTCATGAAGGGACCAGCCGATG
ATGTGACGCCAATTATCTGTGCTTTTTATGTGTTCTCGAACAGTATGCAC
CAGATATCTCGCCCCATGGCCAAGCGTTCCAAGACCACCCTCACCCCTGG
TATACTGTCACATGCCATCGCTCCAAAGGCCGTGGAGGTAACCAGTTACA
TGGTTTCTACTTTACATGCATTCTATAGCCGGGCCAAATTTCCTCGTGAC
AATGCTGATAAACTTCGCCGAAACATTTTGCTACCGACGTGCAAAGATTT
GGTCCATATCGTCAACTTGGACAACAAAGAGGTCATAAGGAGAGTCACAG
ATGAACACGACTCGTACGAAGATGTTCAAAAGGGTTTTAGAGAAGGGCCT
TCTGTTCACGAAGAACGAAGCTACGACATTTTGTGCAGTTATGGGATCCA
ACCTCCTGATCCCCAGTTCGCCTGGATACGTGAGACGTTTCAAAACTTAC
GCACTTGCGGATACGAAATCATCCGGGCATGCGTCTTATCAGGTGTGACA
AAGTCTCCCGAACACTTGAGAGTAATATTGCGAGCCATCTGTACCGACGT
TCAATACATGGAACCATTGCATTTGTTGATGCTCATCTCTCGCATCATAT
CTCCGTTATTATCGTTTTCTATTGTCTCTACAGATCCCTCTTTTTTGGAG
CTCGTGGGCCAGTCCGATGTTCCGAAGCTTCTTCATCGTGTACGAGAGCA
CATTAATGTTTCGATAAAGGGAGCTCAGACATTCAACGAAACTTCTACGC
TAGACATATCCCGTGACTGTGGTAGAGCCTGGTTGCGCAGAGCTGCCGCG
AATTTGATTTCGGGGATATACCCAGTGTTCACTGAGAAGACTGATTCAGA
TGGCCCTCAAATGGAGGAGTTTTTTCCATTTCCCTTTCAGGTTCCGCTCC
TTGGTGAGGCTCTTATTGCACTGTGGACCACGGTCTGCAGTCCAGGACAA
GACGCTAACATTAGGAATTCCTTTCAGTACGCTTTCAATACTGGCTTACA
CGCTGCCGAACTTTCTCCACGGGCCAACTTCCAGTTTTTCGCACCACTTT
TGGACGTATGTTTTAAGGCCGCTGTACTGAATGCCGGTGATACGAATGCA
ACTGCAGATTGTCCTGTTAATGCAACACTAGCGGTCATTAGGAAATGGCC
TGTTGAAAGCGAGCGTCAATTACACGCTACTCTGGGACATAATAGAGTTT
TGCAGGAATAG
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