Gchil4591.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil4591.t1
Unique NameGchil4591.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length761
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004426_piloncontigtig00004426_pilon:1484236..1486607 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog44056.XP_009034106.1
PFAMsPH,PI3_PI4_kinase
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00078
KEGG koko:K21289
KEGG ReactionR04545
KEGG Pathwayko00562,ko04022,ko04072,ko04151,ko04261,ko04371,ko04611,ko04725,ko04921,ko05145,ko05167,map00562,map04022,map04072,map04151,map04261,map04371,map04611,map04725,map04921,map05145,map05167
Evalue1.81e-22
EggNOG OGsCOG5032@1|root,KOG0904@2759|Eukaryota
EC2.7.1.153
Description1-phosphatidylinositol-4-phosphate 3-kinase activity
COG categoryBDLTU
BRITEko00000,ko00001,ko01000,ko04131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4591Gchil4591Gracilaria chilensis NLEC103_M9 malegenetig00004426_pilon 1484236..1486607 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4591.t1Gchil4591.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004426_pilon 1484236..1486607 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4591.t1.stop1Gchil4591.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004426_pilon 1484236..1484238 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4591.t1.CDS1Gchil4591.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004426_pilon 1484236..1484800 -
Gchil4591.t1.CDS2Gchil4591.t1.CDS2Gracilaria chilensis NLEC103_M9 maleCDStig00004426_pilon 1484890..1486607 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4591.t1.exon1Gchil4591.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004426_pilon 1484236..1484800 -
Gchil4591.t1.exon2Gchil4591.t1.exon2Gracilaria chilensis NLEC103_M9 maleexontig00004426_pilon 1484890..1486607 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4591.t1.intron1Gchil4591.t1.intron1Gracilaria chilensis NLEC103_M9 maleintrontig00004426_pilon 1484801..1484889 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4591.t1.start1Gchil4591.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004426_pilon 1486605..1486607 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil4591.t1 ID=Gchil4591.t1|Name=Gchil4591.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=761bp
MTQDQQQTTNLQSIPSSQSEDDSSHSNANLRQLKRLSCAMMSSSSFGSFE
LHPSHLLNLLLAPDLEDSLTHEALLAANNVAIFRLLPLILAAIHRIGDTP
THRQNYIKLVSVLRMRVAACRGIKLRFLLLIRNPAFARQWNVKLVHRRDC
YQSARHALDDYAREMSATPTSSRLSQSDSTLFRLADSKQVEGWLEDKKTL
ISFAARRLLHPEHGIRIRTINWFMRPIRVAFFGTELVDGIMERANFRSRA
QAIELAQRILDLGLINKVGGHSSKFTDSKKRVYQCRLALQREDGRHCCVK
TENNKIIRCWDDLGKQPVAIKQIEVQLPMDMVDLQSFEFWTNTAYVRDVD
KGYRYGYRAITHPLYCGGLNPLANLDFPKDISEDVSASDNVSTASFGSSS
LDFASDQLPTKSAISIAEINDIRQDSSVIGSVVVRKVFSSIARPMIVELR
VPMENADLEEDEQHIILPPGILIKEGDNLMQDLGVQVMFQVFNHIWQSSP
LTKPKYTKPPFSFCYEVFPTNPTQGFMEAMTGLIPLKDFDWANWSNRFGL
DPARVDDILRSTVGSYIGAYICGGRDRHFDNVLVKDNQYLLHIDFGFLMG
TSPPIDGPRIAIAPQMEAVFKKLDIWDRFVNMCVDAFLALRAEAPAIIRS
FVMMFSKAGYDEAQIRSFVQGKFSLNVHDSEKRAGELIKRQLVMSSGDIK
TKFKAFAHAHIDPAWYGLLEKGFPPAVAIMKLVDAKEQKAAKKLSQRTAV
IISDEQKIQL*
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spliced messenger RNA

>Gchil4591.t1 ID=Gchil4591.t1|Name=Gchil4591.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2283bp|location=Sequence derived from alignment at tig00004426_pilon:1484236..1486607- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTCAGGACCAGCAGCAGACGACCAATCTTCAATCAATTCCCTCCTC
GCAATCAGAGGACGACTCTTCCCATTCAAATGCTAATTTGCGACAACTTA
AGCGATTATCATGTGCTATGATGTCCAGTTCCTCCTTCGGCTCGTTTGAG
CTTCATCCTTCCCACCTGTTAAACCTGCTACTCGCACCAGACCTGGAAGA
CAGCCTCACTCACGAAGCACTGCTCGCTGCGAATAATGTCGCCATTTTCC
GTTTACTACCGCTTATTCTGGCTGCCATACACCGTATTGGCGACACTCCC
ACTCATCGTCAGAATTATATAAAGCTAGTATCTGTTCTGCGTATGCGTGT
TGCTGCCTGCCGCGGGATTAAGTTACGCTTTTTGTTGCTTATTCGTAATC
CTGCCTTTGCCCGACAATGGAACGTCAAACTTGTCCATCGAAGGGATTGT
TACCAGTCCGCCCGGCACGCGCTCGACGATTACGCACGTGAAATGTCAGC
CACTCCCACCTCGAGCAGGTTATCACAATCTGATTCCACTTTATTTCGTC
TCGCGGACAGCAAGCAAGTCGAAGGCTGGTTGGAGGACAAAAAAACCCTC
ATCAGCTTTGCAGCTCGACGCTTGCTGCACCCGGAACACGGCATTCGCAT
TCGCACTATCAACTGGTTCATGCGTCCGATCCGTGTCGCTTTCTTCGGCA
CTGAACTAGTTGACGGGATTATGGAACGAGCAAACTTCAGGTCCAGAGCT
CAGGCTATTGAACTCGCTCAACGAATACTCGATTTAGGGCTGATAAATAA
GGTTGGTGGTCACTCTTCAAAGTTCACTGATTCCAAGAAGCGAGTATACC
AATGTCGCTTGGCTTTACAGCGTGAAGATGGTCGCCACTGTTGCGTAAAA
ACGGAGAACAATAAGATCATTAGATGTTGGGATGATCTTGGGAAACAGCC
TGTTGCAATCAAACAGATTGAGGTACAACTGCCAATGGATATGGTTGACT
TGCAAAGCTTTGAGTTTTGGACCAACACAGCTTATGTTCGCGATGTTGAT
AAGGGCTATCGATATGGATATCGGGCTATCACACATCCGTTGTACTGTGG
TGGTTTAAACCCGCTAGCGAACCTTGACTTCCCCAAGGACATCTCAGAAG
ACGTGTCTGCGAGCGACAATGTATCCACGGCGAGTTTTGGTTCTTCATCT
CTGGATTTTGCTAGTGATCAATTGCCAACGAAATCGGCGATTTCAATAGC
GGAGATCAACGACATTCGTCAGGACAGTTCGGTAATAGGCTCTGTCGTTG
TTCGCAAGGTCTTCTCCAGTATCGCCCGCCCCATGATAGTTGAACTGAGA
GTGCCGATGGAGAATGCTGACTTAGAGGAAGATGAGCAGCACATTATACT
CCCCCCAGGTATACTTATCAAAGAGGGAGACAACCTCATGCAGGATCTGG
GTGTACAGGTCATGTTCCAAGTTTTCAATCATATATGGCAGTCATCACCG
CTCACTAAACCTAAGTACACCAAACCACCATTTAGTTTCTGCTATGAAGT
CTTCCCGACAAACCCGACTCAGGGCTTCATGGAGGCCATGACTGGCTTAA
TCCCCCTGAAGGATTTCGATTGGGCAAATTGGAGTAACAGGTTTGGTTTG
GACCCTGCGCGTGTTGATGACATTCTTCGTTCTACTGTCGGATCATATAT
TGGAGCTTATATCTGCGGAGGAAGAGATAGACATTTCGACAACGTTCTGG
TCAAGGATAATCAATATCTTCTGCATATCGATTTTGGCTTCCTCATGGGG
ACCAGTCCTCCAATCGATGGACCACGTATCGCGATTGCGCCGCAGATGGA
GGCCGTTTTCAAAAAGTTGGATATTTGGGATAGGTTTGTGAACATGTGCG
TCGATGCTTTTCTCGCTCTGCGAGCCGAAGCTCCCGCGATTATTCGATCA
TTTGTTATGATGTTTAGCAAGGCTGGGTACGATGAGGCGCAGATTCGAAG
CTTCGTGCAAGGCAAGTTTAGTTTAAATGTGCATGACAGTGAAAAGAGGG
CGGGAGAACTAATCAAGAGGCAGTTAGTCATGAGCTCCGGGGACATCAAG
ACAAAGTTCAAGGCGTTTGCACATGCGCATATTGATCCAGCTTGGTATGG
ACTTCTTGAGAAAGGATTCCCACCTGCCGTAGCTATCATGAAGCTCGTCG
ACGCTAAGGAGCAAAAAGCAGCCAAGAAGCTGTCGCAGAGAACTGCGGTG
ATTATTAGTGACGAACAAAAGATTCAGCTCTGA
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protein sequence of Gchil4591.t1

>Gchil4591.t1 ID=Gchil4591.t1|Name=Gchil4591.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=761bp
MTQDQQQTTNLQSIPSSQSEDDSSHSNANLRQLKRLSCAMMSSSSFGSFE
LHPSHLLNLLLAPDLEDSLTHEALLAANNVAIFRLLPLILAAIHRIGDTP
THRQNYIKLVSVLRMRVAACRGIKLRFLLLIRNPAFARQWNVKLVHRRDC
YQSARHALDDYAREMSATPTSSRLSQSDSTLFRLADSKQVEGWLEDKKTL
ISFAARRLLHPEHGIRIRTINWFMRPIRVAFFGTELVDGIMERANFRSRA
QAIELAQRILDLGLINKVGGHSSKFTDSKKRVYQCRLALQREDGRHCCVK
TENNKIIRCWDDLGKQPVAIKQIEVQLPMDMVDLQSFEFWTNTAYVRDVD
KGYRYGYRAITHPLYCGGLNPLANLDFPKDISEDVSASDNVSTASFGSSS
LDFASDQLPTKSAISIAEINDIRQDSSVIGSVVVRKVFSSIARPMIVELR
VPMENADLEEDEQHIILPPGILIKEGDNLMQDLGVQVMFQVFNHIWQSSP
LTKPKYTKPPFSFCYEVFPTNPTQGFMEAMTGLIPLKDFDWANWSNRFGL
DPARVDDILRSTVGSYIGAYICGGRDRHFDNVLVKDNQYLLHIDFGFLMG
TSPPIDGPRIAIAPQMEAVFKKLDIWDRFVNMCVDAFLALRAEAPAIIRS
FVMMFSKAGYDEAQIRSFVQGKFSLNVHDSEKRAGELIKRQLVMSSGDIK
TKFKAFAHAHIDPAWYGLLEKGFPPAVAIMKLVDAKEQKAAKKLSQRTAV
IISDEQKIQL*
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mRNA from alignment at tig00004426_pilon:1484236..1486607-

Legend: polypeptideCDSexonstart_codonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil4591.t1 ID=Gchil4591.t1|Name=Gchil4591.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2372bp|location=Sequence derived from alignment at tig00004426_pilon:1484236..1486607- (Gracilaria chilensis NLEC103_M9 male)
ATGACTCAGGACCAGCAGCAGACGACCAATCTTCAATCAATTCCCTCCTC
GCAATCAGAGGACGACTCTTCCCATTCAAATGCTAATTTGCGACAACTTA
AGCGATTATCATGTGCTATGATGTCCAGTTCCTCCTTCGGCTCGTTTGAG
CTTCATCCTTCCCACCTGTTAAACCTGCTACTCGCACCAGACCTGGAAGA
CAGCCTCACTCACGAAGCACTGCTCGCTGCGAATAATGTCGCCATTTTCC
GTTTACTACCGCTTATTCTGGCTGCCATACACCGTATTGGCGACACTCCC
ACTCATCGTCAGAATTATATAAAGCTAGTATCTGTTCTGCGTATGCGTGT
TGCTGCCTGCCGCGGGATTAAGTTACGCTTTTTGTTGCTTATTCGTAATC
CTGCCTTTGCCCGACAATGGAACGTCAAACTTGTCCATCGAAGGGATTGT
TACCAGTCCGCCCGGCACGCGCTCGACGATTACGCACGTGAAATGTCAGC
CACTCCCACCTCGAGCAGGTTATCACAATCTGATTCCACTTTATTTCGTC
TCGCGGACAGCAAGCAAGTCGAAGGCTGGTTGGAGGACAAAAAAACCCTC
ATCAGCTTTGCAGCTCGACGCTTGCTGCACCCGGAACACGGCATTCGCAT
TCGCACTATCAACTGGTTCATGCGTCCGATCCGTGTCGCTTTCTTCGGCA
CTGAACTAGTTGACGGGATTATGGAACGAGCAAACTTCAGGTCCAGAGCT
CAGGCTATTGAACTCGCTCAACGAATACTCGATTTAGGGCTGATAAATAA
GGTTGGTGGTCACTCTTCAAAGTTCACTGATTCCAAGAAGCGAGTATACC
AATGTCGCTTGGCTTTACAGCGTGAAGATGGTCGCCACTGTTGCGTAAAA
ACGGAGAACAATAAGATCATTAGATGTTGGGATGATCTTGGGAAACAGCC
TGTTGCAATCAAACAGATTGAGGTACAACTGCCAATGGATATGGTTGACT
TGCAAAGCTTTGAGTTTTGGACCAACACAGCTTATGTTCGCGATGTTGAT
AAGGGCTATCGATATGGATATCGGGCTATCACACATCCGTTGTACTGTGG
TGGTTTAAACCCGCTAGCGAACCTTGACTTCCCCAAGGACATCTCAGAAG
ACGTGTCTGCGAGCGACAATGTATCCACGGCGAGTTTTGGTTCTTCATCT
CTGGATTTTGCTAGTGATCAATTGCCAACGAAATCGGCGATTTCAATAGC
GGAGATCAACGACATTCGTCAGGACAGTTCGGTAATAGGCTCTGTCGTTG
TTCGCAAGGTCTTCTCCAGTATCGCCCGCCCCATGATAGTTGAACTGAGA
GTGCCGATGGAGAATGCTGACTTAGAGGAAGATGAGCAGCACATTATACT
CCCCCCAGGTATACTTATCAAAGAGGGAGACAACCTCATGCAGGATCTGG
GTGTACAGGTCATGTTCCAAGTTTTCAATCATATATGGCAGTCATCACCG
CTCACTAAACCTAAGTACACCAAACCACCATTTAGTTTCTGCTATGAAGT
CTTCCCGACAAACCCGACTCAGGGCTTCATGGAGGCCATGACTGGCTTAA
TCCCCCTGAAGGATTTCGATTGGGCAAATTGGAGTAACAGGTTTGGTTTG
GACCCTGCGCGTGTTGATGACATTCTTCGTTCTACTGTCGGATCATATAT
TGGAGCTTATATCTGCGGGTAAGTTAAGTACATGGTCCTGCGCTACCGAA
GTCTGCTTTATCTAACTCATTTCTTTCTTCTGCCTTACTCGGCTGTTTGT
CATACAGAGGAAGAGATAGACATTTCGACAACGTTCTGGTCAAGGATAAT
CAATATCTTCTGCATATCGATTTTGGCTTCCTCATGGGGACCAGTCCTCC
AATCGATGGACCACGTATCGCGATTGCGCCGCAGATGGAGGCCGTTTTCA
AAAAGTTGGATATTTGGGATAGGTTTGTGAACATGTGCGTCGATGCTTTT
CTCGCTCTGCGAGCCGAAGCTCCCGCGATTATTCGATCATTTGTTATGAT
GTTTAGCAAGGCTGGGTACGATGAGGCGCAGATTCGAAGCTTCGTGCAAG
GCAAGTTTAGTTTAAATGTGCATGACAGTGAAAAGAGGGCGGGAGAACTA
ATCAAGAGGCAGTTAGTCATGAGCTCCGGGGACATCAAGACAAAGTTCAA
GGCGTTTGCACATGCGCATATTGATCCAGCTTGGTATGGACTTCTTGAGA
AAGGATTCCCACCTGCCGTAGCTATCATGAAGCTCGTCGACGCTAAGGAG
CAAAAAGCAGCCAAGAAGCTGTCGCAGAGAACTGCGGTGATTATTAGTGA
CGAACAAAAGATTCAGCTCTGA
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Coding sequence (CDS) from alignment at tig00004426_pilon:1484236..1486607-

>Gchil4591.t1 ID=Gchil4591.t1|Name=Gchil4591.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2283bp|location=Sequence derived from alignment at tig00004426_pilon:1484236..1486607- (Gracilaria chilensis NLEC103_M9 male)
ATGACTCAGGACCAGCAGCAGACGACCAATCTTCAATCAATTCCCTCCTC
GCAATCAGAGGACGACTCTTCCCATTCAAATGCTAATTTGCGACAACTTA
AGCGATTATCATGTGCTATGATGTCCAGTTCCTCCTTCGGCTCGTTTGAG
CTTCATCCTTCCCACCTGTTAAACCTGCTACTCGCACCAGACCTGGAAGA
CAGCCTCACTCACGAAGCACTGCTCGCTGCGAATAATGTCGCCATTTTCC
GTTTACTACCGCTTATTCTGGCTGCCATACACCGTATTGGCGACACTCCC
ACTCATCGTCAGAATTATATAAAGCTAGTATCTGTTCTGCGTATGCGTGT
TGCTGCCTGCCGCGGGATTAAGTTACGCTTTTTGTTGCTTATTCGTAATC
CTGCCTTTGCCCGACAATGGAACGTCAAACTTGTCCATCGAAGGGATTGT
TACCAGTCCGCCCGGCACGCGCTCGACGATTACGCACGTGAAATGTCAGC
CACTCCCACCTCGAGCAGGTTATCACAATCTGATTCCACTTTATTTCGTC
TCGCGGACAGCAAGCAAGTCGAAGGCTGGTTGGAGGACAAAAAAACCCTC
ATCAGCTTTGCAGCTCGACGCTTGCTGCACCCGGAACACGGCATTCGCAT
TCGCACTATCAACTGGTTCATGCGTCCGATCCGTGTCGCTTTCTTCGGCA
CTGAACTAGTTGACGGGATTATGGAACGAGCAAACTTCAGGTCCAGAGCT
CAGGCTATTGAACTCGCTCAACGAATACTCGATTTAGGGCTGATAAATAA
GGTTGGTGGTCACTCTTCAAAGTTCACTGATTCCAAGAAGCGAGTATACC
AATGTCGCTTGGCTTTACAGCGTGAAGATGGTCGCCACTGTTGCGTAAAA
ACGGAGAACAATAAGATCATTAGATGTTGGGATGATCTTGGGAAACAGCC
TGTTGCAATCAAACAGATTGAGGTACAACTGCCAATGGATATGGTTGACT
TGCAAAGCTTTGAGTTTTGGACCAACACAGCTTATGTTCGCGATGTTGAT
AAGGGCTATCGATATGGATATCGGGCTATCACACATCCGTTGTACTGTGG
TGGTTTAAACCCGCTAGCGAACCTTGACTTCCCCAAGGACATCTCAGAAG
ACGTGTCTGCGAGCGACAATGTATCCACGGCGAGTTTTGGTTCTTCATCT
CTGGATTTTGCTAGTGATCAATTGCCAACGAAATCGGCGATTTCAATAGC
GGAGATCAACGACATTCGTCAGGACAGTTCGGTAATAGGCTCTGTCGTTG
TTCGCAAGGTCTTCTCCAGTATCGCCCGCCCCATGATAGTTGAACTGAGA
GTGCCGATGGAGAATGCTGACTTAGAGGAAGATGAGCAGCACATTATACT
CCCCCCAGGTATACTTATCAAAGAGGGAGACAACCTCATGCAGGATCTGG
GTGTACAGGTCATGTTCCAAGTTTTCAATCATATATGGCAGTCATCACCG
CTCACTAAACCTAAGTACACCAAACCACCATTTAGTTTCTGCTATGAAGT
CTTCCCGACAAACCCGACTCAGGGCTTCATGGAGGCCATGACTGGCTTAA
TCCCCCTGAAGGATTTCGATTGGGCAAATTGGAGTAACAGGTTTGGTTTG
GACCCTGCGCGTGTTGATGACATTCTTCGTTCTACTGTCGGATCATATAT
TGGAGCTTATATCTGCGGAGGAAGAGATAGACATTTCGACAACGTTCTGG
TCAAGGATAATCAATATCTTCTGCATATCGATTTTGGCTTCCTCATGGGG
ACCAGTCCTCCAATCGATGGACCACGTATCGCGATTGCGCCGCAGATGGA
GGCCGTTTTCAAAAAGTTGGATATTTGGGATAGGTTTGTGAACATGTGCG
TCGATGCTTTTCTCGCTCTGCGAGCCGAAGCTCCCGCGATTATTCGATCA
TTTGTTATGATGTTTAGCAAGGCTGGGTACGATGAGGCGCAGATTCGAAG
CTTCGTGCAAGGCAAGTTTAGTTTAAATGTGCATGACAGTGAAAAGAGGG
CGGGAGAACTAATCAAGAGGCAGTTAGTCATGAGCTCCGGGGACATCAAG
ACAAAGTTCAAGGCGTTTGCACATGCGCATATTGATCCAGCTTGGTATGG
ACTTCTTGAGAAAGGATTCCCACCTGCCGTAGCTATCATGAAGCTCGTCG
ACGCTAAGGAGCAAAAAGCAGCCAAGAAGCTGTCGCAGAGAACTGCGGTG
ATTATTAGTGACGAACAAAAGATTCAGCTCTGA
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