Gchil4569.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gchil4569.t1
Unique Name	Gchil4569.t1
Type	mRNA
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	1758

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004426_pilon	contig	tig00004426_pilon:1212047..1217320 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	130081.XP_005708607.1
PFAMs	Sec7,Sec7_N
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K18442,ko:K18443
KEGG Pathway	ko04144,map04144
GOs	GO:0000137,GO:0003674,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005795,GO:0005798,GO:0005802,GO:0005829,GO:0006810,GO:0006888,GO:0006890,GO:0006891,GO:0006914,GO:0006996,GO:0007010,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016236,GO:0019898,GO:0019899,GO:0030029,GO:0030036,GO:0031410,GO:0031982,GO:0031984,GO:0031985,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048193,GO:0051020,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061919,GO:0065007,GO:0065009,GO:0071840,GO:0097708,GO:0098772,GO:0098791
Evalue	9.59e-169
EggNOG OGs	COG5307@1\|root,KOG0928@2759\|Eukaryota
Description	regulation of ARF protein signal transduction
COG category	L
BRITE	ko00000,ko00001,ko04131

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil4569	Gchil4569	Gracilaria chilensis NLEC103_M9 male	gene	tig00004426_pilon 1212047..1217320 +

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil4569.t1.start1	Gchil4569.t1.start1	Gracilaria chilensis NLEC103_M9 male	start_codon	tig00004426_pilon 1212047..1212049 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil4569.t1.CDS1	Gchil4569.t1.CDS1	Gracilaria chilensis NLEC103_M9 male	CDS	tig00004426_pilon 1212047..1217320 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil4569.t1.exon1	Gchil4569.t1.exon1	Gracilaria chilensis NLEC103_M9 male	exon	tig00004426_pilon 1212047..1217320 +

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil4569.t1.stop1	Gchil4569.t1.stop1	Gracilaria chilensis NLEC103_M9 male	stop_codon	tig00004426_pilon 1217318..1217320 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil4569.t1	Gchil4569.t1	Gracilaria chilensis NLEC103_M9 male	polypeptide	tig00004426_pilon 1212047..1217320 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00004426_pilon:1212047..1217320+
coding sequence from alignment at tig00004426_pilon:1212047..1217320+

mRNA sequence

>Gchil4569.t1 ID=Gchil4569.t1|Name=Gchil4569.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1758bp
MPHTPVSLSVVLLGEARELLSSLRRNRRFGYLLSFASTPQPAEHPLVKEV
KSLREVLRVPVSTALPNQSSPVWSQKSLIPPDALLNALDPFFEVVRSRDA
SGIITGVALKSLDAIAAHIILLANEKQLLHQYAPALSSIIDAAAACRFDA
TDPASDEVVLSRITRVLTTVLCSAALPMLADASILRSIEACMGIASGRRR
ASILLKSTADAALVNICSAIGQQSRPIITSHDNIQESDIPSIFAHGLSGP
AFGYAFDSDSFNQHGPASVAMIAALVQLVSRMADPLYAQSSAERILGLEL
ISSLLGSGGTTLKSHSVLKLFLLRDCSRGILRTLGNYQSEPGIIASAFTI
ATKLVHVLEENGAPLLFALLDRVYPYYISGYENVLPAAMGGRKPHADEQL
KGNHGTSQSMNGSTNSIAPAPVDLDPVIREIGLESLAALFATPGLLCVMY
RLADCDMKRTDMVHPLLQALGEAAKTARFRRRSKRLRASSSGTHRLADAT
VDPESDDEDSILQVSGGNPESSRFGRACALLCAEAVLAIVDTISDRLKLE
TTGLSNPPTMDYQAQKHGRQVRKEKKRLQRAGDDFNSSEKVNKAAKLVPI
LRNHGFIAQHSNSDGTVSEDLKGDVKAIVRFLRDTPGLSKEKIGVILGEP
DNLSRCVLSDYTATFEFAHRPFTESLRVFLESFRLPGEAQKISRIVQSFA
DRYYSQYQESPGKASSSPENSTDGSTEAGIPSGSQVESGNSVSTKVAAVE
QQEAAPTSENSSAVGVLKSADAAYVLSYSVVMLNTDLHNASIRKKMTLED
FVRNCRGLNDMSDFPRWFLSEIYSSIAEVEIRMSDEAGIGALTDLLWDEQ
ISRMGSELSSFPTAQSSLVFEEDLFFLSWEAAVVATNSILNEAGDANSVQ
KALEGFLSVARCATSFRIGHPTDAVISSLCTATTIREGPLHGAAVRFGTD
IKAQMASVALSGVSRQCGDWLQAEGWQALVAYVLRLHALCLLPPDLEEEL
GGYGPELVMSSTNEKCQSSLIPNWWPSQSNRPGHPIEEEKPKRATRANGF
FAAILAVSLGSELDSDEEDFEDHEDNGAAHGHARRKVSHIAPSYVRMKTR
EETEALDLARRCIVSCRIEDVVIREAKVLQSSALEHLSQAIARSAIRVMS
AKADDDGKGVEASPGSGTAQDSSSVIDWAEIAPQSPTHDSSIIAGVTLRQ
SSRATAESDSDYPSFGLSQSWEGSLRERDERKARELVIAFCVDALCELTF
QNRDRLHIPWPALHSLLIRIIAPATYPSPILERAVVALLRVGVRLLNRQE
LRDDVLRGLNLLVRLPTETAKALSVPVIIGVHNMIEVHGAIIRSTSGWHA
ILSILENSAQYQAKAREIGLTTLIGILRGQYSAEAISSESFAPLLDAIIA
YTSSSSVEISIQALDLLYLLAQRIPSFKDRVRSRKGDSPPTSVSLEGSEQ
IDPMTEESMWSEYWSPLFLGFAASIRDSRGKVRNHALGVVERVLALGGSA
EFLSATEWSQTLTSVILPLMTQLFMTHGFLSATIEAERAAQRKLLAEKSA
AVSGRRGRPRSFAVSAEHDEQLLKSVIAACNRTRMRAVFLTSKTFLQHHA
VIANGLPEAAFTELWMAILEVFRVAFNSSSAPVKEISNIKSMIRAPDQDE
VLEHIPETVKNVLLVMCGCGLLSPRTHEVRWNATFTMVRDFIPDIDEIVS
TATQGALTTNSKQSNSSKETSTCDPPQSNQSEQNKTTAELEGMENVALAS
QESLVST*

spliced messenger RNA

>Gchil4569.t1 ID=Gchil4569.t1|Name=Gchil4569.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=5274bp|location=Sequence derived from alignment at tig00004426_pilon:1212047..1217320+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTCACACGCCAGTGTCTCTTTCCGTTGTTCTCCTCGGCGAAGCCAG
AGAGCTTCTGAGTTCCTTGCGCAGAAACAGACGCTTCGGTTATCTCCTCT
CTTTCGCCTCCACCCCCCAGCCAGCCGAGCATCCTCTTGTCAAGGAAGTC
AAGTCGCTTAGAGAGGTACTGCGTGTCCCCGTATCCACCGCCCTTCCAAA
CCAGTCAAGCCCCGTTTGGTCTCAAAAGTCCCTCATACCTCCAGATGCTC
TTCTTAACGCATTGGATCCCTTTTTTGAGGTTGTGCGTTCCCGTGATGCA
TCGGGCATCATCACGGGTGTGGCACTCAAGTCACTAGATGCAATCGCAGC
CCACATCATTCTCTTAGCCAACGAAAAACAACTGCTCCATCAGTATGCAC
CTGCGCTAAGCTCTATCATAGATGCTGCCGCCGCCTGCCGCTTCGACGCC
ACTGATCCAGCGTCGGATGAAGTGGTGCTTTCCCGCATAACCAGAGTGTT
AACCACTGTTCTTTGTTCAGCTGCCTTGCCTATGCTTGCTGATGCGTCTA
TCCTGCGCTCAATCGAGGCTTGCATGGGAATTGCCTCTGGCAGGAGGCGC
GCGTCGATACTATTGAAGAGCACAGCCGATGCTGCCCTCGTCAATATTTG
TTCAGCCATAGGTCAGCAGTCACGACCTATAATAACTAGTCATGACAATA
TTCAGGAAAGCGACATTCCTTCAATTTTCGCTCACGGTTTGAGTGGACCA
GCCTTTGGGTATGCATTCGACTCAGATTCATTCAATCAGCATGGTCCAGC
ATCAGTGGCAATGATTGCAGCCCTTGTCCAACTTGTCTCAAGAATGGCGG
ATCCTCTCTACGCGCAATCATCTGCGGAGAGAATTCTCGGATTAGAGCTC
ATATCTTCTCTTCTAGGATCTGGGGGCACAACTTTGAAATCACACTCAGT
GCTGAAATTATTCTTACTCAGAGATTGCTCTCGTGGAATTCTTCGCACAT
TAGGCAACTATCAATCTGAGCCTGGTATCATAGCGTCAGCTTTTACGATT
GCAACAAAATTGGTGCATGTGCTAGAGGAAAATGGTGCCCCGCTGCTGTT
TGCGCTTCTAGACCGTGTCTACCCTTATTATATTTCGGGGTACGAGAACG
TTTTACCTGCTGCTATGGGAGGAAGAAAACCTCATGCAGATGAACAGTTG
AAAGGAAATCACGGAACTTCTCAGTCGATGAATGGAAGCACAAATTCAAT
TGCTCCGGCTCCAGTGGACTTGGATCCAGTCATTAGAGAAATAGGGCTTG
AGTCCTTGGCGGCCCTCTTTGCAACTCCCGGTTTGCTTTGCGTAATGTAT
CGACTCGCAGACTGCGACATGAAAAGGACAGATATGGTCCATCCCTTACT
CCAGGCGCTTGGCGAAGCTGCGAAAACAGCTCGATTTCGTCGTCGTAGTA
AACGACTCCGTGCGTCTTCTAGCGGCACACATCGCTTGGCTGATGCGACA
GTGGATCCTGAGAGTGATGATGAGGACTCAATTCTACAAGTTAGTGGCGG
AAACCCGGAATCATCACGTTTTGGAAGAGCTTGTGCTCTCTTGTGTGCCG
AAGCAGTGTTAGCTATAGTTGACACCATCAGTGATAGGCTGAAACTTGAG
ACCACAGGGTTGTCAAACCCACCTACAATGGATTACCAGGCTCAAAAGCA
CGGACGACAAGTGCGAAAGGAAAAGAAACGTTTGCAGAGAGCTGGAGATG
ATTTTAACAGCTCAGAAAAAGTTAACAAGGCTGCTAAACTAGTACCGATA
TTGCGAAACCACGGCTTCATTGCACAGCACTCGAATTCGGATGGGACTGT
GAGTGAAGATCTAAAAGGGGATGTCAAAGCCATAGTAAGATTTTTGAGAG
ACACACCAGGTCTCAGCAAGGAGAAAATTGGTGTCATCCTGGGGGAACCA
GACAACCTTTCCCGCTGTGTGCTTTCTGATTACACTGCTACTTTCGAGTT
CGCGCACAGGCCGTTTACAGAGTCTCTCCGAGTATTTTTGGAAAGTTTTC
GTCTTCCAGGTGAAGCTCAGAAGATTAGTAGAATTGTGCAGTCATTCGCA
GACAGATATTACTCGCAGTATCAAGAGAGTCCCGGAAAGGCAAGCTCAAG
TCCCGAAAACTCCACAGATGGATCCACAGAGGCTGGTATTCCAAGTGGCT
CGCAGGTTGAATCAGGGAACTCAGTGAGCACAAAAGTCGCCGCAGTTGAG
CAACAAGAAGCGGCTCCTACTTCTGAAAATTCATCTGCCGTGGGTGTATT
GAAGAGTGCAGATGCCGCTTACGTTCTGAGCTACTCCGTTGTAATGCTGA
ACACAGACTTGCACAATGCTTCAATCAGAAAAAAGATGACCCTGGAAGAT
TTTGTAAGGAACTGTCGAGGTCTCAATGATATGTCTGACTTTCCTCGGTG
GTTCTTGTCTGAGATATACAGTTCCATTGCTGAAGTTGAAATTCGCATGA
GTGACGAAGCTGGTATTGGAGCGTTGACAGATCTTCTCTGGGACGAGCAA
ATCAGCAGAATGGGTTCTGAACTGTCAAGCTTCCCAACGGCTCAAAGCTC
TCTTGTGTTTGAGGAAGATCTATTCTTTCTCTCTTGGGAAGCTGCGGTGG
TGGCCACAAACTCAATACTGAACGAAGCTGGGGATGCCAATTCTGTCCAA
AAAGCCCTTGAAGGGTTTCTGTCTGTGGCAAGATGTGCCACCTCGTTTAG
AATCGGGCACCCAACGGATGCAGTCATCTCCTCTTTGTGTACTGCCACGA
CGATTCGAGAAGGTCCGTTGCATGGTGCCGCCGTAAGATTTGGGACAGAT
ATCAAGGCACAGATGGCATCGGTAGCATTATCCGGCGTATCTCGACAATG
CGGTGACTGGCTTCAGGCAGAGGGATGGCAAGCCCTCGTCGCGTATGTGC
TTCGACTGCACGCACTATGTCTCTTACCACCAGATCTTGAGGAGGAACTT
GGAGGGTACGGTCCAGAGTTGGTTATGTCCTCAACTAATGAGAAGTGCCA
ATCTTCACTTATTCCCAATTGGTGGCCCTCACAGTCTAACAGGCCTGGTC
ACCCTATCGAAGAAGAGAAGCCAAAACGCGCGACTAGGGCAAATGGGTTC
TTTGCCGCTATTCTCGCTGTATCTCTTGGTTCGGAGTTGGATTCGGATGA
GGAAGATTTCGAAGACCACGAAGATAATGGTGCTGCACATGGCCATGCAC
GGCGGAAGGTTTCACATATTGCACCATCGTATGTTCGAATGAAGACTCGT
GAAGAGACCGAAGCCCTTGATCTTGCTCGCAGATGTATTGTGAGTTGTCG
GATAGAAGATGTTGTAATCAGGGAAGCCAAGGTTTTGCAGTCATCAGCTC
TTGAGCACTTATCTCAGGCTATAGCTAGATCGGCAATCAGGGTCATGAGC
GCGAAAGCAGATGATGACGGAAAAGGAGTAGAAGCGTCTCCCGGTAGTGG
AACCGCACAAGACAGTTCTTCCGTCATTGATTGGGCAGAAATAGCCCCCC
AAAGTCCAACACATGATTCCTCCATAATTGCCGGCGTGACCCTAAGACAA
TCCTCCAGAGCTACTGCTGAATCGGACTCTGATTATCCATCATTTGGCCT
ATCACAAAGTTGGGAGGGTTCATTGCGAGAAAGAGACGAAAGAAAGGCAA
GAGAACTTGTCATCGCTTTTTGCGTAGACGCACTATGTGAGCTGACATTT
CAGAATCGAGATCGATTGCACATTCCATGGCCAGCGCTACATAGCTTGTT
GATTCGAATTATTGCTCCAGCCACTTATCCATCTCCAATCTTAGAAAGGG
CTGTTGTAGCCCTTCTCCGCGTTGGTGTTCGCCTCTTAAATCGTCAAGAA
TTGCGAGATGACGTGCTTCGCGGGTTGAACCTTCTGGTTCGTTTGCCAAC
CGAGACAGCAAAGGCGCTGTCGGTCCCCGTCATTATAGGTGTCCACAACA
TGATCGAAGTGCATGGTGCCATTATTCGATCTACTTCTGGATGGCACGCT
ATCCTTTCAATTCTTGAAAACAGTGCCCAATATCAAGCGAAAGCAAGAGA
AATAGGCCTCACAACTTTAATTGGTATACTCCGTGGCCAGTATTCGGCGG
AAGCTATATCATCGGAATCCTTTGCACCTCTGCTAGACGCCATAATAGCA
TACACTTCCAGCTCCTCAGTGGAAATATCTATTCAGGCGCTTGACCTTCT
TTACTTACTGGCGCAGCGCATTCCATCTTTCAAAGACAGGGTCAGGAGCC
GAAAAGGAGACTCACCACCAACGTCAGTGTCTCTGGAAGGGAGTGAACAG
ATTGACCCAATGACCGAGGAAAGTATGTGGTCTGAGTACTGGAGCCCATT
ATTTCTGGGATTTGCTGCCTCTATTCGAGATTCTCGTGGGAAAGTCCGCA
ACCACGCGCTTGGTGTCGTGGAGAGAGTCCTTGCGCTAGGAGGGTCTGCT
GAATTCTTATCTGCAACAGAATGGAGTCAGACGTTGACATCAGTCATTCT
TCCACTGATGACACAACTGTTCATGACCCATGGATTTTTATCTGCTACAA
TAGAGGCGGAAAGGGCCGCTCAGAGAAAGCTTCTTGCCGAAAAAAGTGCA
GCTGTTTCTGGGAGAAGAGGCAGACCAAGGTCTTTTGCCGTATCTGCGGA
ACATGACGAACAACTATTGAAATCGGTGATTGCTGCTTGCAATAGGACCA
GGATGCGAGCTGTCTTCCTCACTTCGAAAACATTTCTGCAACATCATGCA
GTGATCGCCAATGGTCTGCCAGAAGCTGCTTTCACAGAGCTCTGGATGGC
AATCTTGGAAGTATTTAGGGTAGCATTCAATAGCAGTTCTGCCCCTGTGA
AAGAAATTTCGAACATCAAGTCGATGATCAGGGCACCAGATCAAGATGAG
GTTCTGGAGCACATTCCGGAAACTGTGAAGAACGTATTATTGGTTATGTG
TGGTTGCGGCTTGTTATCACCACGAACTCATGAAGTGAGATGGAACGCTA
CGTTCACAATGGTGCGCGATTTCATTCCTGATATTGACGAAATTGTTTCG
ACTGCCACTCAAGGCGCACTAACTACCAACAGCAAGCAAAGTAACTCATC
CAAAGAAACTAGTACTTGTGATCCCCCGCAATCGAATCAAAGCGAGCAAA
ACAAGACGACCGCAGAACTCGAAGGAATGGAAAATGTTGCACTCGCGTCA
CAGGAATCCCTTGTTTCGACGTAG

protein sequence of Gchil4569.t1

>Gchil4569.t1 ID=Gchil4569.t1|Name=Gchil4569.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1758bp
MPHTPVSLSVVLLGEARELLSSLRRNRRFGYLLSFASTPQPAEHPLVKEV
KSLREVLRVPVSTALPNQSSPVWSQKSLIPPDALLNALDPFFEVVRSRDA
SGIITGVALKSLDAIAAHIILLANEKQLLHQYAPALSSIIDAAAACRFDA
TDPASDEVVLSRITRVLTTVLCSAALPMLADASILRSIEACMGIASGRRR
ASILLKSTADAALVNICSAIGQQSRPIITSHDNIQESDIPSIFAHGLSGP
AFGYAFDSDSFNQHGPASVAMIAALVQLVSRMADPLYAQSSAERILGLEL
ISSLLGSGGTTLKSHSVLKLFLLRDCSRGILRTLGNYQSEPGIIASAFTI
ATKLVHVLEENGAPLLFALLDRVYPYYISGYENVLPAAMGGRKPHADEQL
KGNHGTSQSMNGSTNSIAPAPVDLDPVIREIGLESLAALFATPGLLCVMY
RLADCDMKRTDMVHPLLQALGEAAKTARFRRRSKRLRASSSGTHRLADAT
VDPESDDEDSILQVSGGNPESSRFGRACALLCAEAVLAIVDTISDRLKLE
TTGLSNPPTMDYQAQKHGRQVRKEKKRLQRAGDDFNSSEKVNKAAKLVPI
LRNHGFIAQHSNSDGTVSEDLKGDVKAIVRFLRDTPGLSKEKIGVILGEP
DNLSRCVLSDYTATFEFAHRPFTESLRVFLESFRLPGEAQKISRIVQSFA
DRYYSQYQESPGKASSSPENSTDGSTEAGIPSGSQVESGNSVSTKVAAVE
QQEAAPTSENSSAVGVLKSADAAYVLSYSVVMLNTDLHNASIRKKMTLED
FVRNCRGLNDMSDFPRWFLSEIYSSIAEVEIRMSDEAGIGALTDLLWDEQ
ISRMGSELSSFPTAQSSLVFEEDLFFLSWEAAVVATNSILNEAGDANSVQ
KALEGFLSVARCATSFRIGHPTDAVISSLCTATTIREGPLHGAAVRFGTD
IKAQMASVALSGVSRQCGDWLQAEGWQALVAYVLRLHALCLLPPDLEEEL
GGYGPELVMSSTNEKCQSSLIPNWWPSQSNRPGHPIEEEKPKRATRANGF
FAAILAVSLGSELDSDEEDFEDHEDNGAAHGHARRKVSHIAPSYVRMKTR
EETEALDLARRCIVSCRIEDVVIREAKVLQSSALEHLSQAIARSAIRVMS
AKADDDGKGVEASPGSGTAQDSSSVIDWAEIAPQSPTHDSSIIAGVTLRQ
SSRATAESDSDYPSFGLSQSWEGSLRERDERKARELVIAFCVDALCELTF
QNRDRLHIPWPALHSLLIRIIAPATYPSPILERAVVALLRVGVRLLNRQE
LRDDVLRGLNLLVRLPTETAKALSVPVIIGVHNMIEVHGAIIRSTSGWHA
ILSILENSAQYQAKAREIGLTTLIGILRGQYSAEAISSESFAPLLDAIIA
YTSSSSVEISIQALDLLYLLAQRIPSFKDRVRSRKGDSPPTSVSLEGSEQ
IDPMTEESMWSEYWSPLFLGFAASIRDSRGKVRNHALGVVERVLALGGSA
EFLSATEWSQTLTSVILPLMTQLFMTHGFLSATIEAERAAQRKLLAEKSA
AVSGRRGRPRSFAVSAEHDEQLLKSVIAACNRTRMRAVFLTSKTFLQHHA
VIANGLPEAAFTELWMAILEVFRVAFNSSSAPVKEISNIKSMIRAPDQDE
VLEHIPETVKNVLLVMCGCGLLSPRTHEVRWNATFTMVRDFIPDIDEIVS
TATQGALTTNSKQSNSSKETSTCDPPQSNQSEQNKTTAELEGMENVALAS
QESLVST*

mRNA from alignment at tig00004426_pilon:1212047..1217320+

Legend: start_codonpolypeptideCDSexonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gchil4569.t1 ID=Gchil4569.t1|Name=Gchil4569.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=5274bp|location=Sequence derived from alignment at tig00004426_pilon:1212047..1217320+ (Gracilaria chilensis NLEC103_M9 male)
ATGCCTCACACGCCAGTGTCTCTTTCCGTTGTTCTCCTCGGCGAAGCCAG
AGAGCTTCTGAGTTCCTTGCGCAGAAACAGACGCTTCGGTTATCTCCTCT
CTTTCGCCTCCACCCCCCAGCCAGCCGAGCATCCTCTTGTCAAGGAAGTC
AAGTCGCTTAGAGAGGTACTGCGTGTCCCCGTATCCACCGCCCTTCCAAA
CCAGTCAAGCCCCGTTTGGTCTCAAAAGTCCCTCATACCTCCAGATGCTC
TTCTTAACGCATTGGATCCCTTTTTTGAGGTTGTGCGTTCCCGTGATGCA
TCGGGCATCATCACGGGTGTGGCACTCAAGTCACTAGATGCAATCGCAGC
CCACATCATTCTCTTAGCCAACGAAAAACAACTGCTCCATCAGTATGCAC
CTGCGCTAAGCTCTATCATAGATGCTGCCGCCGCCTGCCGCTTCGACGCC
ACTGATCCAGCGTCGGATGAAGTGGTGCTTTCCCGCATAACCAGAGTGTT
AACCACTGTTCTTTGTTCAGCTGCCTTGCCTATGCTTGCTGATGCGTCTA
TCCTGCGCTCAATCGAGGCTTGCATGGGAATTGCCTCTGGCAGGAGGCGC
GCGTCGATACTATTGAAGAGCACAGCCGATGCTGCCCTCGTCAATATTTG
TTCAGCCATAGGTCAGCAGTCACGACCTATAATAACTAGTCATGACAATA
TTCAGGAAAGCGACATTCCTTCAATTTTCGCTCACGGTTTGAGTGGACCA
GCCTTTGGGTATGCATTCGACTCAGATTCATTCAATCAGCATGGTCCAGC
ATCAGTGGCAATGATTGCAGCCCTTGTCCAACTTGTCTCAAGAATGGCGG
ATCCTCTCTACGCGCAATCATCTGCGGAGAGAATTCTCGGATTAGAGCTC
ATATCTTCTCTTCTAGGATCTGGGGGCACAACTTTGAAATCACACTCAGT
GCTGAAATTATTCTTACTCAGAGATTGCTCTCGTGGAATTCTTCGCACAT
TAGGCAACTATCAATCTGAGCCTGGTATCATAGCGTCAGCTTTTACGATT
GCAACAAAATTGGTGCATGTGCTAGAGGAAAATGGTGCCCCGCTGCTGTT
TGCGCTTCTAGACCGTGTCTACCCTTATTATATTTCGGGGTACGAGAACG
TTTTACCTGCTGCTATGGGAGGAAGAAAACCTCATGCAGATGAACAGTTG
AAAGGAAATCACGGAACTTCTCAGTCGATGAATGGAAGCACAAATTCAAT
TGCTCCGGCTCCAGTGGACTTGGATCCAGTCATTAGAGAAATAGGGCTTG
AGTCCTTGGCGGCCCTCTTTGCAACTCCCGGTTTGCTTTGCGTAATGTAT
CGACTCGCAGACTGCGACATGAAAAGGACAGATATGGTCCATCCCTTACT
CCAGGCGCTTGGCGAAGCTGCGAAAACAGCTCGATTTCGTCGTCGTAGTA
AACGACTCCGTGCGTCTTCTAGCGGCACACATCGCTTGGCTGATGCGACA
GTGGATCCTGAGAGTGATGATGAGGACTCAATTCTACAAGTTAGTGGCGG
AAACCCGGAATCATCACGTTTTGGAAGAGCTTGTGCTCTCTTGTGTGCCG
AAGCAGTGTTAGCTATAGTTGACACCATCAGTGATAGGCTGAAACTTGAG
ACCACAGGGTTGTCAAACCCACCTACAATGGATTACCAGGCTCAAAAGCA
CGGACGACAAGTGCGAAAGGAAAAGAAACGTTTGCAGAGAGCTGGAGATG
ATTTTAACAGCTCAGAAAAAGTTAACAAGGCTGCTAAACTAGTACCGATA
TTGCGAAACCACGGCTTCATTGCACAGCACTCGAATTCGGATGGGACTGT
GAGTGAAGATCTAAAAGGGGATGTCAAAGCCATAGTAAGATTTTTGAGAG
ACACACCAGGTCTCAGCAAGGAGAAAATTGGTGTCATCCTGGGGGAACCA
GACAACCTTTCCCGCTGTGTGCTTTCTGATTACACTGCTACTTTCGAGTT
CGCGCACAGGCCGTTTACAGAGTCTCTCCGAGTATTTTTGGAAAGTTTTC
GTCTTCCAGGTGAAGCTCAGAAGATTAGTAGAATTGTGCAGTCATTCGCA
GACAGATATTACTCGCAGTATCAAGAGAGTCCCGGAAAGGCAAGCTCAAG
TCCCGAAAACTCCACAGATGGATCCACAGAGGCTGGTATTCCAAGTGGCT
CGCAGGTTGAATCAGGGAACTCAGTGAGCACAAAAGTCGCCGCAGTTGAG
CAACAAGAAGCGGCTCCTACTTCTGAAAATTCATCTGCCGTGGGTGTATT
GAAGAGTGCAGATGCCGCTTACGTTCTGAGCTACTCCGTTGTAATGCTGA
ACACAGACTTGCACAATGCTTCAATCAGAAAAAAGATGACCCTGGAAGAT
TTTGTAAGGAACTGTCGAGGTCTCAATGATATGTCTGACTTTCCTCGGTG
GTTCTTGTCTGAGATATACAGTTCCATTGCTGAAGTTGAAATTCGCATGA
GTGACGAAGCTGGTATTGGAGCGTTGACAGATCTTCTCTGGGACGAGCAA
ATCAGCAGAATGGGTTCTGAACTGTCAAGCTTCCCAACGGCTCAAAGCTC
TCTTGTGTTTGAGGAAGATCTATTCTTTCTCTCTTGGGAAGCTGCGGTGG
TGGCCACAAACTCAATACTGAACGAAGCTGGGGATGCCAATTCTGTCCAA
AAAGCCCTTGAAGGGTTTCTGTCTGTGGCAAGATGTGCCACCTCGTTTAG
AATCGGGCACCCAACGGATGCAGTCATCTCCTCTTTGTGTACTGCCACGA
CGATTCGAGAAGGTCCGTTGCATGGTGCCGCCGTAAGATTTGGGACAGAT
ATCAAGGCACAGATGGCATCGGTAGCATTATCCGGCGTATCTCGACAATG
CGGTGACTGGCTTCAGGCAGAGGGATGGCAAGCCCTCGTCGCGTATGTGC
TTCGACTGCACGCACTATGTCTCTTACCACCAGATCTTGAGGAGGAACTT
GGAGGGTACGGTCCAGAGTTGGTTATGTCCTCAACTAATGAGAAGTGCCA
ATCTTCACTTATTCCCAATTGGTGGCCCTCACAGTCTAACAGGCCTGGTC
ACCCTATCGAAGAAGAGAAGCCAAAACGCGCGACTAGGGCAAATGGGTTC
TTTGCCGCTATTCTCGCTGTATCTCTTGGTTCGGAGTTGGATTCGGATGA
GGAAGATTTCGAAGACCACGAAGATAATGGTGCTGCACATGGCCATGCAC
GGCGGAAGGTTTCACATATTGCACCATCGTATGTTCGAATGAAGACTCGT
GAAGAGACCGAAGCCCTTGATCTTGCTCGCAGATGTATTGTGAGTTGTCG
GATAGAAGATGTTGTAATCAGGGAAGCCAAGGTTTTGCAGTCATCAGCTC
TTGAGCACTTATCTCAGGCTATAGCTAGATCGGCAATCAGGGTCATGAGC
GCGAAAGCAGATGATGACGGAAAAGGAGTAGAAGCGTCTCCCGGTAGTGG
AACCGCACAAGACAGTTCTTCCGTCATTGATTGGGCAGAAATAGCCCCCC
AAAGTCCAACACATGATTCCTCCATAATTGCCGGCGTGACCCTAAGACAA
TCCTCCAGAGCTACTGCTGAATCGGACTCTGATTATCCATCATTTGGCCT
ATCACAAAGTTGGGAGGGTTCATTGCGAGAAAGAGACGAAAGAAAGGCAA
GAGAACTTGTCATCGCTTTTTGCGTAGACGCACTATGTGAGCTGACATTT
CAGAATCGAGATCGATTGCACATTCCATGGCCAGCGCTACATAGCTTGTT
GATTCGAATTATTGCTCCAGCCACTTATCCATCTCCAATCTTAGAAAGGG
CTGTTGTAGCCCTTCTCCGCGTTGGTGTTCGCCTCTTAAATCGTCAAGAA
TTGCGAGATGACGTGCTTCGCGGGTTGAACCTTCTGGTTCGTTTGCCAAC
CGAGACAGCAAAGGCGCTGTCGGTCCCCGTCATTATAGGTGTCCACAACA
TGATCGAAGTGCATGGTGCCATTATTCGATCTACTTCTGGATGGCACGCT
ATCCTTTCAATTCTTGAAAACAGTGCCCAATATCAAGCGAAAGCAAGAGA
AATAGGCCTCACAACTTTAATTGGTATACTCCGTGGCCAGTATTCGGCGG
AAGCTATATCATCGGAATCCTTTGCACCTCTGCTAGACGCCATAATAGCA
TACACTTCCAGCTCCTCAGTGGAAATATCTATTCAGGCGCTTGACCTTCT
TTACTTACTGGCGCAGCGCATTCCATCTTTCAAAGACAGGGTCAGGAGCC
GAAAAGGAGACTCACCACCAACGTCAGTGTCTCTGGAAGGGAGTGAACAG
ATTGACCCAATGACCGAGGAAAGTATGTGGTCTGAGTACTGGAGCCCATT
ATTTCTGGGATTTGCTGCCTCTATTCGAGATTCTCGTGGGAAAGTCCGCA
ACCACGCGCTTGGTGTCGTGGAGAGAGTCCTTGCGCTAGGAGGGTCTGCT
GAATTCTTATCTGCAACAGAATGGAGTCAGACGTTGACATCAGTCATTCT
TCCACTGATGACACAACTGTTCATGACCCATGGATTTTTATCTGCTACAA
TAGAGGCGGAAAGGGCCGCTCAGAGAAAGCTTCTTGCCGAAAAAAGTGCA
GCTGTTTCTGGGAGAAGAGGCAGACCAAGGTCTTTTGCCGTATCTGCGGA
ACATGACGAACAACTATTGAAATCGGTGATTGCTGCTTGCAATAGGACCA
GGATGCGAGCTGTCTTCCTCACTTCGAAAACATTTCTGCAACATCATGCA
GTGATCGCCAATGGTCTGCCAGAAGCTGCTTTCACAGAGCTCTGGATGGC
AATCTTGGAAGTATTTAGGGTAGCATTCAATAGCAGTTCTGCCCCTGTGA
AAGAAATTTCGAACATCAAGTCGATGATCAGGGCACCAGATCAAGATGAG
GTTCTGGAGCACATTCCGGAAACTGTGAAGAACGTATTATTGGTTATGTG
TGGTTGCGGCTTGTTATCACCACGAACTCATGAAGTGAGATGGAACGCTA
CGTTCACAATGGTGCGCGATTTCATTCCTGATATTGACGAAATTGTTTCG
ACTGCCACTCAAGGCGCACTAACTACCAACAGCAAGCAAAGTAACTCATC
CAAAGAAACTAGTACTTGTGATCCCCCGCAATCGAATCAAAGCGAGCAAA
ACAAGACGACCGCAGAACTCGAAGGAATGGAAAATGTTGCACTCGCGTCA
CAGGAATCCCTTGTTTCGACGTAG

Coding sequence (CDS) from alignment at tig00004426_pilon:1212047..1217320+

>Gchil4569.t1 ID=Gchil4569.t1|Name=Gchil4569.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=5274bp|location=Sequence derived from alignment at tig00004426_pilon:1212047..1217320+ (Gracilaria chilensis NLEC103_M9 male)
ATGCCTCACACGCCAGTGTCTCTTTCCGTTGTTCTCCTCGGCGAAGCCAG
AGAGCTTCTGAGTTCCTTGCGCAGAAACAGACGCTTCGGTTATCTCCTCT
CTTTCGCCTCCACCCCCCAGCCAGCCGAGCATCCTCTTGTCAAGGAAGTC
AAGTCGCTTAGAGAGGTACTGCGTGTCCCCGTATCCACCGCCCTTCCAAA
CCAGTCAAGCCCCGTTTGGTCTCAAAAGTCCCTCATACCTCCAGATGCTC
TTCTTAACGCATTGGATCCCTTTTTTGAGGTTGTGCGTTCCCGTGATGCA
TCGGGCATCATCACGGGTGTGGCACTCAAGTCACTAGATGCAATCGCAGC
CCACATCATTCTCTTAGCCAACGAAAAACAACTGCTCCATCAGTATGCAC
CTGCGCTAAGCTCTATCATAGATGCTGCCGCCGCCTGCCGCTTCGACGCC
ACTGATCCAGCGTCGGATGAAGTGGTGCTTTCCCGCATAACCAGAGTGTT
AACCACTGTTCTTTGTTCAGCTGCCTTGCCTATGCTTGCTGATGCGTCTA
TCCTGCGCTCAATCGAGGCTTGCATGGGAATTGCCTCTGGCAGGAGGCGC
GCGTCGATACTATTGAAGAGCACAGCCGATGCTGCCCTCGTCAATATTTG
TTCAGCCATAGGTCAGCAGTCACGACCTATAATAACTAGTCATGACAATA
TTCAGGAAAGCGACATTCCTTCAATTTTCGCTCACGGTTTGAGTGGACCA
GCCTTTGGGTATGCATTCGACTCAGATTCATTCAATCAGCATGGTCCAGC
ATCAGTGGCAATGATTGCAGCCCTTGTCCAACTTGTCTCAAGAATGGCGG
ATCCTCTCTACGCGCAATCATCTGCGGAGAGAATTCTCGGATTAGAGCTC
ATATCTTCTCTTCTAGGATCTGGGGGCACAACTTTGAAATCACACTCAGT
GCTGAAATTATTCTTACTCAGAGATTGCTCTCGTGGAATTCTTCGCACAT
TAGGCAACTATCAATCTGAGCCTGGTATCATAGCGTCAGCTTTTACGATT
GCAACAAAATTGGTGCATGTGCTAGAGGAAAATGGTGCCCCGCTGCTGTT
TGCGCTTCTAGACCGTGTCTACCCTTATTATATTTCGGGGTACGAGAACG
TTTTACCTGCTGCTATGGGAGGAAGAAAACCTCATGCAGATGAACAGTTG
AAAGGAAATCACGGAACTTCTCAGTCGATGAATGGAAGCACAAATTCAAT
TGCTCCGGCTCCAGTGGACTTGGATCCAGTCATTAGAGAAATAGGGCTTG
AGTCCTTGGCGGCCCTCTTTGCAACTCCCGGTTTGCTTTGCGTAATGTAT
CGACTCGCAGACTGCGACATGAAAAGGACAGATATGGTCCATCCCTTACT
CCAGGCGCTTGGCGAAGCTGCGAAAACAGCTCGATTTCGTCGTCGTAGTA
AACGACTCCGTGCGTCTTCTAGCGGCACACATCGCTTGGCTGATGCGACA
GTGGATCCTGAGAGTGATGATGAGGACTCAATTCTACAAGTTAGTGGCGG
AAACCCGGAATCATCACGTTTTGGAAGAGCTTGTGCTCTCTTGTGTGCCG
AAGCAGTGTTAGCTATAGTTGACACCATCAGTGATAGGCTGAAACTTGAG
ACCACAGGGTTGTCAAACCCACCTACAATGGATTACCAGGCTCAAAAGCA
CGGACGACAAGTGCGAAAGGAAAAGAAACGTTTGCAGAGAGCTGGAGATG
ATTTTAACAGCTCAGAAAAAGTTAACAAGGCTGCTAAACTAGTACCGATA
TTGCGAAACCACGGCTTCATTGCACAGCACTCGAATTCGGATGGGACTGT
GAGTGAAGATCTAAAAGGGGATGTCAAAGCCATAGTAAGATTTTTGAGAG
ACACACCAGGTCTCAGCAAGGAGAAAATTGGTGTCATCCTGGGGGAACCA
GACAACCTTTCCCGCTGTGTGCTTTCTGATTACACTGCTACTTTCGAGTT
CGCGCACAGGCCGTTTACAGAGTCTCTCCGAGTATTTTTGGAAAGTTTTC
GTCTTCCAGGTGAAGCTCAGAAGATTAGTAGAATTGTGCAGTCATTCGCA
GACAGATATTACTCGCAGTATCAAGAGAGTCCCGGAAAGGCAAGCTCAAG
TCCCGAAAACTCCACAGATGGATCCACAGAGGCTGGTATTCCAAGTGGCT
CGCAGGTTGAATCAGGGAACTCAGTGAGCACAAAAGTCGCCGCAGTTGAG
CAACAAGAAGCGGCTCCTACTTCTGAAAATTCATCTGCCGTGGGTGTATT
GAAGAGTGCAGATGCCGCTTACGTTCTGAGCTACTCCGTTGTAATGCTGA
ACACAGACTTGCACAATGCTTCAATCAGAAAAAAGATGACCCTGGAAGAT
TTTGTAAGGAACTGTCGAGGTCTCAATGATATGTCTGACTTTCCTCGGTG
GTTCTTGTCTGAGATATACAGTTCCATTGCTGAAGTTGAAATTCGCATGA
GTGACGAAGCTGGTATTGGAGCGTTGACAGATCTTCTCTGGGACGAGCAA
ATCAGCAGAATGGGTTCTGAACTGTCAAGCTTCCCAACGGCTCAAAGCTC
TCTTGTGTTTGAGGAAGATCTATTCTTTCTCTCTTGGGAAGCTGCGGTGG
TGGCCACAAACTCAATACTGAACGAAGCTGGGGATGCCAATTCTGTCCAA
AAAGCCCTTGAAGGGTTTCTGTCTGTGGCAAGATGTGCCACCTCGTTTAG
AATCGGGCACCCAACGGATGCAGTCATCTCCTCTTTGTGTACTGCCACGA
CGATTCGAGAAGGTCCGTTGCATGGTGCCGCCGTAAGATTTGGGACAGAT
ATCAAGGCACAGATGGCATCGGTAGCATTATCCGGCGTATCTCGACAATG
CGGTGACTGGCTTCAGGCAGAGGGATGGCAAGCCCTCGTCGCGTATGTGC
TTCGACTGCACGCACTATGTCTCTTACCACCAGATCTTGAGGAGGAACTT
GGAGGGTACGGTCCAGAGTTGGTTATGTCCTCAACTAATGAGAAGTGCCA
ATCTTCACTTATTCCCAATTGGTGGCCCTCACAGTCTAACAGGCCTGGTC
ACCCTATCGAAGAAGAGAAGCCAAAACGCGCGACTAGGGCAAATGGGTTC
TTTGCCGCTATTCTCGCTGTATCTCTTGGTTCGGAGTTGGATTCGGATGA
GGAAGATTTCGAAGACCACGAAGATAATGGTGCTGCACATGGCCATGCAC
GGCGGAAGGTTTCACATATTGCACCATCGTATGTTCGAATGAAGACTCGT
GAAGAGACCGAAGCCCTTGATCTTGCTCGCAGATGTATTGTGAGTTGTCG
GATAGAAGATGTTGTAATCAGGGAAGCCAAGGTTTTGCAGTCATCAGCTC
TTGAGCACTTATCTCAGGCTATAGCTAGATCGGCAATCAGGGTCATGAGC
GCGAAAGCAGATGATGACGGAAAAGGAGTAGAAGCGTCTCCCGGTAGTGG
AACCGCACAAGACAGTTCTTCCGTCATTGATTGGGCAGAAATAGCCCCCC
AAAGTCCAACACATGATTCCTCCATAATTGCCGGCGTGACCCTAAGACAA
TCCTCCAGAGCTACTGCTGAATCGGACTCTGATTATCCATCATTTGGCCT
ATCACAAAGTTGGGAGGGTTCATTGCGAGAAAGAGACGAAAGAAAGGCAA
GAGAACTTGTCATCGCTTTTTGCGTAGACGCACTATGTGAGCTGACATTT
CAGAATCGAGATCGATTGCACATTCCATGGCCAGCGCTACATAGCTTGTT
GATTCGAATTATTGCTCCAGCCACTTATCCATCTCCAATCTTAGAAAGGG
CTGTTGTAGCCCTTCTCCGCGTTGGTGTTCGCCTCTTAAATCGTCAAGAA
TTGCGAGATGACGTGCTTCGCGGGTTGAACCTTCTGGTTCGTTTGCCAAC
CGAGACAGCAAAGGCGCTGTCGGTCCCCGTCATTATAGGTGTCCACAACA
TGATCGAAGTGCATGGTGCCATTATTCGATCTACTTCTGGATGGCACGCT
ATCCTTTCAATTCTTGAAAACAGTGCCCAATATCAAGCGAAAGCAAGAGA
AATAGGCCTCACAACTTTAATTGGTATACTCCGTGGCCAGTATTCGGCGG
AAGCTATATCATCGGAATCCTTTGCACCTCTGCTAGACGCCATAATAGCA
TACACTTCCAGCTCCTCAGTGGAAATATCTATTCAGGCGCTTGACCTTCT
TTACTTACTGGCGCAGCGCATTCCATCTTTCAAAGACAGGGTCAGGAGCC
GAAAAGGAGACTCACCACCAACGTCAGTGTCTCTGGAAGGGAGTGAACAG
ATTGACCCAATGACCGAGGAAAGTATGTGGTCTGAGTACTGGAGCCCATT
ATTTCTGGGATTTGCTGCCTCTATTCGAGATTCTCGTGGGAAAGTCCGCA
ACCACGCGCTTGGTGTCGTGGAGAGAGTCCTTGCGCTAGGAGGGTCTGCT
GAATTCTTATCTGCAACAGAATGGAGTCAGACGTTGACATCAGTCATTCT
TCCACTGATGACACAACTGTTCATGACCCATGGATTTTTATCTGCTACAA
TAGAGGCGGAAAGGGCCGCTCAGAGAAAGCTTCTTGCCGAAAAAAGTGCA
GCTGTTTCTGGGAGAAGAGGCAGACCAAGGTCTTTTGCCGTATCTGCGGA
ACATGACGAACAACTATTGAAATCGGTGATTGCTGCTTGCAATAGGACCA
GGATGCGAGCTGTCTTCCTCACTTCGAAAACATTTCTGCAACATCATGCA
GTGATCGCCAATGGTCTGCCAGAAGCTGCTTTCACAGAGCTCTGGATGGC
AATCTTGGAAGTATTTAGGGTAGCATTCAATAGCAGTTCTGCCCCTGTGA
AAGAAATTTCGAACATCAAGTCGATGATCAGGGCACCAGATCAAGATGAG
GTTCTGGAGCACATTCCGGAAACTGTGAAGAACGTATTATTGGTTATGTG
TGGTTGCGGCTTGTTATCACCACGAACTCATGAAGTGAGATGGAACGCTA
CGTTCACAATGGTGCGCGATTTCATTCCTGATATTGACGAAATTGTTTCG
ACTGCCACTCAAGGCGCACTAACTACCAACAGCAAGCAAAGTAACTCATC
CAAAGAAACTAGTACTTGTGATCCCCCGCAATCGAATCAAAGCGAGCAAA
ACAAGACGACCGCAGAACTCGAAGGAATGGAAAATGTTGCACTCGCGTCA
CAGGAATCCCTTGTTTCGACGTAG