Gchil4557.t2 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gchil4557.t2
Unique Name	Gchil4557.t2
Type	mRNA
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	663

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004426_pilon	contig	tig00004426_pilon:1127768..1129756 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	2880.D7G0K9
Preferred name	PHO89
PFAMs	PHO4
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K01280,ko:K03306,ko:K14640
KEGG TC	2.A.20,2.A.20.2
GOs	GO:0003674,GO:0005215,GO:0005315,GO:0005436,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006817,GO:0006820,GO:0008150,GO:0008324,GO:0012505,GO:0015075,GO:0015077,GO:0015081,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015319,GO:0015370,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0035725,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662
Evalue	1.8e-100
EggNOG OGs	COG0306@1\|root,KOG2493@2759\|Eukaryota
EC	3.4.14.10
Description	inorganic phosphate transmembrane transporter activity
COG category	U
BRITE	ko00000,ko01000,ko01002,ko02000,ko03110

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil4557	Gchil4557	Gracilaria chilensis NLEC103_M9 male	gene	tig00004426_pilon 1127768..1129756 -

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil4557.t2.stop1	Gchil4557.t2.stop1	Gracilaria chilensis NLEC103_M9 male	stop_codon	tig00004426_pilon 1127768..1127770 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil4557.t2.CDS1	Gchil4557.t2.CDS1	Gracilaria chilensis NLEC103_M9 male	CDS	tig00004426_pilon 1127768..1129756 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil4557.t2.exon1	Gchil4557.t2.exon1	Gracilaria chilensis NLEC103_M9 male	exon	tig00004426_pilon 1127768..1129756 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil4557.t2.start1	Gchil4557.t2.start1	Gracilaria chilensis NLEC103_M9 male	start_codon	tig00004426_pilon 1129754..1129756 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil4557.t2	Gchil4557.t2	Gracilaria chilensis NLEC103_M9 male	polypeptide	tig00004426_pilon 1127768..1129756 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00004426_pilon:1127768..1129756-
coding sequence from alignment at tig00004426_pilon:1127768..1129756-

mRNA sequence

>Gchil4557.t2 ID=Gchil4557.t2|Name=Gchil4557.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=663bp
MATPTLVYDWPIAGNAATVLGNAVQINTVDKYYWMVVVGGILAFAMAWGI
GANDVANAFATSVGAGSLNLKWACVIAAVMEFSGALLLGGNVSDTVRKKI
IDPDVFDPNSPEGSLNGPEMLITGFLVALMAATSWLIIATYLSLPVSTTH
SIIGAIVGVGIAYRGAGTVNWWEGDSFKDKMKGVVGVILSWIISPLLSAI
FAVLFFLIVRTLVLRRKDPFKNGLIFMPVFYGFAVALAVFFIIYKGDSRF
DIAEDLGVGPCVGIALGAGAVVAVVSTFTIVPLAKRYIARWETRQREAEE
NPEAAQKAKEKSKKVDDALRKVGVNINIKEELDDDVVRIHESVEKFDPKT
EQLFTWVQIFTAAFDSFAHGANDVANAIAPFASIYQLQRNHGIISRVSHE
EFESDVTLNQGERNGERVVEGDPLPNHESFCGISDGQTFFRCKGPVFPFR
TPQSEGAAGKEFDAYDGEGKLIESDKQCFTSCNRGSFSSFDSFKQPVPLW
ILAMGGAGIVVGLAMWGYRIILAIGVKLTKLTPSRGFSIEIGAAICVLIA
SQIGIPVSTTHCQVGATMGVGLVEFKKSTVNWKQFLFICIGWVFTVLFTG
IVSAVIYLIITRSPMNFSATATDLDYCPGQRLFLYDSEKQQFRGVSCAGV
DFEGDQSLVSLA*

spliced messenger RNA

>Gchil4557.t2 ID=Gchil4557.t2|Name=Gchil4557.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1989bp|location=Sequence derived from alignment at tig00004426_pilon:1127768..1129756- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTACACCTACCCTCGTCTACGACTGGCCCATTGCAGGCAATGCTGC
AACTGTGCTTGGCAATGCCGTGCAGATTAACACCGTCGATAAATATTATT
GGATGGTGGTGGTAGGTGGCATCCTCGCCTTCGCAATGGCTTGGGGGATA
GGCGCGAATGATGTCGCTAACGCCTTCGCAACTTCTGTCGGTGCCGGTTC
GCTCAATCTCAAATGGGCCTGCGTCATCGCCGCCGTCATGGAGTTTTCCG
GCGCTCTTTTGCTTGGCGGAAATGTCTCGGATACTGTTAGAAAGAAGATT
ATCGACCCAGATGTCTTCGACCCCAACTCTCCTGAAGGTTCTCTCAATGG
ACCGGAGATGCTTATAACTGGTTTCTTGGTTGCCCTCATGGCCGCCACCT
CGTGGCTTATTATTGCCACTTACCTCAGCCTTCCGGTGTCTACTACGCAC
TCTATCATTGGAGCAATCGTGGGCGTCGGCATTGCTTACCGAGGTGCTGG
CACTGTCAACTGGTGGGAGGGTGACTCTTTCAAGGACAAGATGAAGGGAG
TGGTGGGTGTTATTTTATCTTGGATTATTTCCCCGCTTCTTTCTGCCATC
TTTGCTGTCCTCTTCTTCCTCATAGTTCGCACACTTGTTTTGAGACGCAA
AGATCCTTTTAAGAATGGCCTTATATTTATGCCTGTGTTCTACGGTTTCG
CAGTTGCCCTTGCTGTGTTTTTCATCATCTACAAGGGAGATTCTCGTTTC
GATATCGCTGAAGACCTAGGAGTAGGGCCATGTGTTGGCATCGCCCTCGG
CGCTGGTGCTGTCGTTGCGGTCGTTTCGACCTTCACCATTGTTCCTCTAG
CCAAAAGGTACATCGCGCGATGGGAAACTCGCCAAAGAGAGGCAGAAGAG
AATCCAGAAGCTGCTCAGAAGGCCAAAGAGAAGAGCAAGAAGGTTGATGA
TGCTTTGCGGAAAGTTGGGGTCAATATCAACATCAAGGAGGAACTTGATG
ATGACGTAGTTCGCATTCATGAAAGTGTCGAAAAGTTTGATCCTAAGACC
GAACAGTTGTTCACTTGGGTGCAAATATTTACAGCTGCCTTTGATTCCTT
CGCGCATGGTGCTAATGATGTCGCCAATGCCATAGCCCCATTCGCTTCGA
TATATCAGCTTCAACGTAACCACGGAATCATTAGTAGAGTAAGCCATGAG
GAATTTGAATCAGATGTAACTCTCAACCAAGGTGAACGGAACGGGGAAAG
AGTTGTGGAAGGGGACCCTCTTCCTAACCATGAATCCTTCTGCGGCATTT
CTGATGGTCAGACTTTCTTCAGATGCAAAGGCCCTGTTTTCCCGTTTAGG
ACACCTCAGTCTGAAGGTGCCGCAGGGAAAGAATTCGACGCTTATGACGG
TGAAGGTAAGCTCATTGAGAGTGACAAACAGTGTTTCACCTCATGTAACA
GAGGTTCATTTTCTTCCTTTGATTCGTTCAAACAACCTGTTCCTCTATGG
ATTTTGGCTATGGGGGGTGCAGGGATTGTGGTCGGTCTTGCCATGTGGGG
CTACCGTATCATTCTTGCAATTGGTGTGAAGCTAACCAAGCTCACACCAT
CTCGTGGCTTCTCCATTGAGATTGGAGCTGCCATCTGCGTCCTCATTGCT
TCGCAAATCGGTATCCCTGTGTCCACGACTCATTGTCAAGTCGGTGCCAC
TATGGGGGTCGGTCTCGTTGAGTTTAAGAAAAGTACCGTCAACTGGAAGC
AATTTCTTTTCATTTGCATTGGATGGGTCTTTACCGTGTTGTTCACGGGT
ATTGTCTCCGCAGTTATATATCTCATCATAACTCGAAGCCCGATGAACTT
CTCGGCGACGGCGACTGATCTGGACTATTGTCCGGGTCAACGTCTGTTCT
TGTACGATTCCGAAAAACAGCAGTTCCGCGGTGTTTCGTGCGCCGGTGTT
GACTTCGAAGGGGACCAGTCGTTGGTATCATTAGCCTAA

protein sequence of Gchil4557.t2

>Gchil4557.t2 ID=Gchil4557.t2|Name=Gchil4557.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=663bp
MATPTLVYDWPIAGNAATVLGNAVQINTVDKYYWMVVVGGILAFAMAWGI
GANDVANAFATSVGAGSLNLKWACVIAAVMEFSGALLLGGNVSDTVRKKI
IDPDVFDPNSPEGSLNGPEMLITGFLVALMAATSWLIIATYLSLPVSTTH
SIIGAIVGVGIAYRGAGTVNWWEGDSFKDKMKGVVGVILSWIISPLLSAI
FAVLFFLIVRTLVLRRKDPFKNGLIFMPVFYGFAVALAVFFIIYKGDSRF
DIAEDLGVGPCVGIALGAGAVVAVVSTFTIVPLAKRYIARWETRQREAEE
NPEAAQKAKEKSKKVDDALRKVGVNINIKEELDDDVVRIHESVEKFDPKT
EQLFTWVQIFTAAFDSFAHGANDVANAIAPFASIYQLQRNHGIISRVSHE
EFESDVTLNQGERNGERVVEGDPLPNHESFCGISDGQTFFRCKGPVFPFR
TPQSEGAAGKEFDAYDGEGKLIESDKQCFTSCNRGSFSSFDSFKQPVPLW
ILAMGGAGIVVGLAMWGYRIILAIGVKLTKLTPSRGFSIEIGAAICVLIA
SQIGIPVSTTHCQVGATMGVGLVEFKKSTVNWKQFLFICIGWVFTVLFTG
IVSAVIYLIITRSPMNFSATATDLDYCPGQRLFLYDSEKQQFRGVSCAGV
DFEGDQSLVSLA*

mRNA from alignment at tig00004426_pilon:1127768..1129756-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gchil4557.t2 ID=Gchil4557.t2|Name=Gchil4557.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1989bp|location=Sequence derived from alignment at tig00004426_pilon:1127768..1129756- (Gracilaria chilensis NLEC103_M9 male)
ATGGCTACACCTACCCTCGTCTACGACTGGCCCATTGCAGGCAATGCTGC
AACTGTGCTTGGCAATGCCGTGCAGATTAACACCGTCGATAAATATTATT
GGATGGTGGTGGTAGGTGGCATCCTCGCCTTCGCAATGGCTTGGGGGATA
GGCGCGAATGATGTCGCTAACGCCTTCGCAACTTCTGTCGGTGCCGGTTC
GCTCAATCTCAAATGGGCCTGCGTCATCGCCGCCGTCATGGAGTTTTCCG
GCGCTCTTTTGCTTGGCGGAAATGTCTCGGATACTGTTAGAAAGAAGATT
ATCGACCCAGATGTCTTCGACCCCAACTCTCCTGAAGGTTCTCTCAATGG
ACCGGAGATGCTTATAACTGGTTTCTTGGTTGCCCTCATGGCCGCCACCT
CGTGGCTTATTATTGCCACTTACCTCAGCCTTCCGGTGTCTACTACGCAC
TCTATCATTGGAGCAATCGTGGGCGTCGGCATTGCTTACCGAGGTGCTGG
CACTGTCAACTGGTGGGAGGGTGACTCTTTCAAGGACAAGATGAAGGGAG
TGGTGGGTGTTATTTTATCTTGGATTATTTCCCCGCTTCTTTCTGCCATC
TTTGCTGTCCTCTTCTTCCTCATAGTTCGCACACTTGTTTTGAGACGCAA
AGATCCTTTTAAGAATGGCCTTATATTTATGCCTGTGTTCTACGGTTTCG
CAGTTGCCCTTGCTGTGTTTTTCATCATCTACAAGGGAGATTCTCGTTTC
GATATCGCTGAAGACCTAGGAGTAGGGCCATGTGTTGGCATCGCCCTCGG
CGCTGGTGCTGTCGTTGCGGTCGTTTCGACCTTCACCATTGTTCCTCTAG
CCAAAAGGTACATCGCGCGATGGGAAACTCGCCAAAGAGAGGCAGAAGAG
AATCCAGAAGCTGCTCAGAAGGCCAAAGAGAAGAGCAAGAAGGTTGATGA
TGCTTTGCGGAAAGTTGGGGTCAATATCAACATCAAGGAGGAACTTGATG
ATGACGTAGTTCGCATTCATGAAAGTGTCGAAAAGTTTGATCCTAAGACC
GAACAGTTGTTCACTTGGGTGCAAATATTTACAGCTGCCTTTGATTCCTT
CGCGCATGGTGCTAATGATGTCGCCAATGCCATAGCCCCATTCGCTTCGA
TATATCAGCTTCAACGTAACCACGGAATCATTAGTAGAGTAAGCCATGAG
GAATTTGAATCAGATGTAACTCTCAACCAAGGTGAACGGAACGGGGAAAG
AGTTGTGGAAGGGGACCCTCTTCCTAACCATGAATCCTTCTGCGGCATTT
CTGATGGTCAGACTTTCTTCAGATGCAAAGGCCCTGTTTTCCCGTTTAGG
ACACCTCAGTCTGAAGGTGCCGCAGGGAAAGAATTCGACGCTTATGACGG
TGAAGGTAAGCTCATTGAGAGTGACAAACAGTGTTTCACCTCATGTAACA
GAGGTTCATTTTCTTCCTTTGATTCGTTCAAACAACCTGTTCCTCTATGG
ATTTTGGCTATGGGGGGTGCAGGGATTGTGGTCGGTCTTGCCATGTGGGG
CTACCGTATCATTCTTGCAATTGGTGTGAAGCTAACCAAGCTCACACCAT
CTCGTGGCTTCTCCATTGAGATTGGAGCTGCCATCTGCGTCCTCATTGCT
TCGCAAATCGGTATCCCTGTGTCCACGACTCATTGTCAAGTCGGTGCCAC
TATGGGGGTCGGTCTCGTTGAGTTTAAGAAAAGTACCGTCAACTGGAAGC
AATTTCTTTTCATTTGCATTGGATGGGTCTTTACCGTGTTGTTCACGGGT
ATTGTCTCCGCAGTTATATATCTCATCATAACTCGAAGCCCGATGAACTT
CTCGGCGACGGCGACTGATCTGGACTATTGTCCGGGTCAACGTCTGTTCT
TGTACGATTCCGAAAAACAGCAGTTCCGCGGTGTTTCGTGCGCCGGTGTT
GACTTCGAAGGGGACCAGTCGTTGGTATCATTAGCCTAA

Coding sequence (CDS) from alignment at tig00004426_pilon:1127768..1129756-

>Gchil4557.t2 ID=Gchil4557.t2|Name=Gchil4557.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1989bp|location=Sequence derived from alignment at tig00004426_pilon:1127768..1129756- (Gracilaria chilensis NLEC103_M9 male)
ATGGCTACACCTACCCTCGTCTACGACTGGCCCATTGCAGGCAATGCTGC
AACTGTGCTTGGCAATGCCGTGCAGATTAACACCGTCGATAAATATTATT
GGATGGTGGTGGTAGGTGGCATCCTCGCCTTCGCAATGGCTTGGGGGATA
GGCGCGAATGATGTCGCTAACGCCTTCGCAACTTCTGTCGGTGCCGGTTC
GCTCAATCTCAAATGGGCCTGCGTCATCGCCGCCGTCATGGAGTTTTCCG
GCGCTCTTTTGCTTGGCGGAAATGTCTCGGATACTGTTAGAAAGAAGATT
ATCGACCCAGATGTCTTCGACCCCAACTCTCCTGAAGGTTCTCTCAATGG
ACCGGAGATGCTTATAACTGGTTTCTTGGTTGCCCTCATGGCCGCCACCT
CGTGGCTTATTATTGCCACTTACCTCAGCCTTCCGGTGTCTACTACGCAC
TCTATCATTGGAGCAATCGTGGGCGTCGGCATTGCTTACCGAGGTGCTGG
CACTGTCAACTGGTGGGAGGGTGACTCTTTCAAGGACAAGATGAAGGGAG
TGGTGGGTGTTATTTTATCTTGGATTATTTCCCCGCTTCTTTCTGCCATC
TTTGCTGTCCTCTTCTTCCTCATAGTTCGCACACTTGTTTTGAGACGCAA
AGATCCTTTTAAGAATGGCCTTATATTTATGCCTGTGTTCTACGGTTTCG
CAGTTGCCCTTGCTGTGTTTTTCATCATCTACAAGGGAGATTCTCGTTTC
GATATCGCTGAAGACCTAGGAGTAGGGCCATGTGTTGGCATCGCCCTCGG
CGCTGGTGCTGTCGTTGCGGTCGTTTCGACCTTCACCATTGTTCCTCTAG
CCAAAAGGTACATCGCGCGATGGGAAACTCGCCAAAGAGAGGCAGAAGAG
AATCCAGAAGCTGCTCAGAAGGCCAAAGAGAAGAGCAAGAAGGTTGATGA
TGCTTTGCGGAAAGTTGGGGTCAATATCAACATCAAGGAGGAACTTGATG
ATGACGTAGTTCGCATTCATGAAAGTGTCGAAAAGTTTGATCCTAAGACC
GAACAGTTGTTCACTTGGGTGCAAATATTTACAGCTGCCTTTGATTCCTT
CGCGCATGGTGCTAATGATGTCGCCAATGCCATAGCCCCATTCGCTTCGA
TATATCAGCTTCAACGTAACCACGGAATCATTAGTAGAGTAAGCCATGAG
GAATTTGAATCAGATGTAACTCTCAACCAAGGTGAACGGAACGGGGAAAG
AGTTGTGGAAGGGGACCCTCTTCCTAACCATGAATCCTTCTGCGGCATTT
CTGATGGTCAGACTTTCTTCAGATGCAAAGGCCCTGTTTTCCCGTTTAGG
ACACCTCAGTCTGAAGGTGCCGCAGGGAAAGAATTCGACGCTTATGACGG
TGAAGGTAAGCTCATTGAGAGTGACAAACAGTGTTTCACCTCATGTAACA
GAGGTTCATTTTCTTCCTTTGATTCGTTCAAACAACCTGTTCCTCTATGG
ATTTTGGCTATGGGGGGTGCAGGGATTGTGGTCGGTCTTGCCATGTGGGG
CTACCGTATCATTCTTGCAATTGGTGTGAAGCTAACCAAGCTCACACCAT
CTCGTGGCTTCTCCATTGAGATTGGAGCTGCCATCTGCGTCCTCATTGCT
TCGCAAATCGGTATCCCTGTGTCCACGACTCATTGTCAAGTCGGTGCCAC
TATGGGGGTCGGTCTCGTTGAGTTTAAGAAAAGTACCGTCAACTGGAAGC
AATTTCTTTTCATTTGCATTGGATGGGTCTTTACCGTGTTGTTCACGGGT
ATTGTCTCCGCAGTTATATATCTCATCATAACTCGAAGCCCGATGAACTT
CTCGGCGACGGCGACTGATCTGGACTATTGTCCGGGTCAACGTCTGTTCT
TGTACGATTCCGAAAAACAGCAGTTCCGCGGTGTTTCGTGCGCCGGTGTT
GACTTCGAAGGGGACCAGTCGTTGGTATCATTAGCCTAA