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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005708884.1 |
| PFAMs | Na_H_Exchanger,TrkA_N |
| Max annot lvl | 2759|Eukaryota |
| Evalue | 2.48e-227 |
| EggNOG OGs | COG0475@1|root,KOG1650@2759|Eukaryota |
| Description | solute:proton antiporter activity |
| COG category | P |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil4449.t1 ID=Gchil4449.t1|Name=Gchil4449.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=882bp MTALQRTMRRAMQGADPTRRSNSHRKHAGAQRNRRHPSPSRRPPDLPTPR PSSPPAMPPAASAAFVAALPLRQNRAPLRREPRSLRLSAVAYSDHRASDH RASPRAARSPWRKALTVITIAAQVLRPAPLRALNAPDLAVPTAAARARAS GRVFVASAVAVKPPPPPLAPSALGNLPEGSEKQSDSHSALLASLPARIER LRRSLLSLLHQPEDSHQHAVNDALVLLIATVLIIPLARRLGISPILGFLA AGVALGPNGFALVNDVRTTKALAELGVVFFLFEMGLELSTSKLKSLRADV FGLGTVQFFVSGAIITAAAVAAGITSQAAIVVGAALALSSSAFVLQLLAE RGEVGTRFGRAAFGILLFQDLVVVPVLVLIPLLAGSGAPAAVWRAVSVAS VKAVLALAFIIFMGNNALQPLFRFVARARSPEAFIAVILLTVLGTSSLTQ MLGLSDTLGAFLAGVMLAETKFRHQVEADIQPFRGLLLGLFFMTVGFSID LNLAWANMSKVVSLVSGLLAIKASVIAAAGVAFGLSVGSALRTGLLLSQG GEFAFVIFGLGQTVGVLPADLSQLLLLVVAISMAVTPLLAATGRQISSQL EKKRGLIGVRMEDADTADARDFVMVAGWGRVGQSVCEMLDAKLVRYMAFD MSPTRVIDARNKGLPVFFGDASRPEVLRVAGVERARAVVVTLDDPEQALR AVQNIRREFEEVKVFCRARDARHQKLLQAAGATAIVPELLEASLLLGGAV LLDYGTPLDEVNSLVEEARSENLAEIGVADDVTATIGSIFKESRSRAHLK QEQESSDAENGEVEEDESEEPELLPLKPDVKTEDIPLVSTATDATEDIYE PAEQDGVLVEDEVAHGKKAAVVEDVESDSVR* back to topspliced messenger RNA >Gchil4449.t1 ID=Gchil4449.t1|Name=Gchil4449.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2646bp|location=Sequence derived from alignment at tig00004426_pilon:354257..356902- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGACAGCATTACAGAGGACGATGCGCCGTGCCATGCAGGGCGCAGATCC AACGCGCAGATCCAACTCGCACCGCAAACACGCTGGCGCACAGCGCAACC GACGCCACCCCTCGCCTTCACGGCGCCCACCCGACCTCCCGACCCCGCGC CCCTCAAGCCCGCCCGCCATGCCGCCAGCTGCGTCCGCGGCCTTCGTTGC CGCGCTCCCGCTGCGTCAAAACCGCGCTCCTCTTCGTCGTGAGCCGCGGA GCTTACGGCTGAGTGCGGTCGCCTACTCGGACCATCGCGCATCGGACCAT CGCGCATCGCCGCGCGCTGCGCGCTCGCCATGGCGAAAGGCTCTCACCGT CATCACCATCGCCGCGCAGGTGTTGCGTCCGGCACCGCTGCGCGCTTTGA ACGCCCCCGATTTGGCCGTCCCCACCGCTGCGGCGCGCGCTCGTGCGTCC GGACGCGTCTTCGTTGCCAGCGCTGTGGCTGTGAAGCCGCCGCCGCCGCC GCTTGCACCCTCGGCGCTCGGGAACCTCCCTGAGGGCTCCGAGAAACAAT CTGATTCACATAGTGCTCTGTTAGCTTCGCTGCCGGCCAGAATCGAGCGC CTCCGACGCTCGCTGCTTTCGCTCCTTCATCAACCCGAAGACTCGCATCA ACATGCCGTCAACGACGCGCTGGTGCTGCTCATTGCCACCGTCCTTATCA TCCCGCTTGCGCGCCGCCTCGGCATCTCTCCCATTCTTGGATTTTTAGCC GCCGGCGTGGCACTGGGGCCGAACGGATTCGCCCTCGTTAATGATGTGCG CACCACAAAGGCTCTGGCAGAACTCGGTGTCGTTTTCTTTCTCTTCGAAA TGGGCTTAGAACTCTCCACATCCAAGCTCAAGTCACTCCGCGCTGATGTC TTCGGCCTGGGTACCGTTCAGTTCTTCGTTTCAGGAGCTATCATCACCGC CGCTGCTGTCGCTGCGGGGATCACATCCCAAGCTGCTATTGTTGTCGGTG CGGCCTTAGCCCTCAGTTCGAGCGCCTTTGTGCTCCAGCTACTGGCTGAG CGCGGTGAAGTTGGCACTCGCTTTGGCCGCGCCGCCTTCGGCATTCTTTT GTTCCAAGATCTTGTCGTCGTTCCGGTCCTCGTCCTCATACCTCTTCTAG CCGGATCGGGCGCACCAGCTGCCGTGTGGCGCGCCGTAAGTGTTGCCAGT GTCAAGGCTGTACTGGCTCTGGCTTTTATCATTTTCATGGGCAATAACGC CTTGCAACCTCTCTTTCGCTTTGTTGCCCGCGCTAGAAGTCCCGAAGCCT TTATTGCAGTCATCCTTCTCACTGTTCTCGGTACTTCCTCCCTCACACAG ATGCTTGGATTGAGTGACACTCTCGGTGCCTTTTTAGCCGGCGTTATGCT TGCAGAAACAAAGTTCAGGCATCAAGTCGAGGCCGACATCCAGCCGTTCC GTGGTCTTCTTTTGGGTTTGTTCTTCATGACTGTGGGATTTTCAATTGAT CTTAATCTGGCCTGGGCCAATATGAGCAAGGTGGTTTCGCTTGTGTCTGG CTTGTTGGCGATCAAGGCTAGCGTTATCGCAGCTGCGGGAGTTGCCTTTG GCCTAAGTGTCGGTTCCGCTCTACGCACTGGACTGCTCCTCTCTCAAGGG GGAGAGTTTGCGTTCGTTATTTTCGGACTTGGACAAACAGTCGGCGTGTT GCCTGCTGACTTGAGCCAGCTGCTTCTGCTCGTTGTGGCCATTTCTATGG CAGTAACCCCACTCCTCGCTGCTACTGGAAGGCAAATATCGTCTCAATTA GAGAAGAAACGAGGGCTCATCGGTGTGCGTATGGAGGATGCTGACACTGC TGATGCTCGCGATTTCGTCATGGTAGCCGGCTGGGGGCGTGTTGGTCAAT CCGTTTGTGAAATGCTCGATGCCAAGCTTGTGAGGTACATGGCATTCGAT ATGTCTCCAACAAGAGTCATAGATGCACGAAACAAGGGCTTACCGGTCTT CTTTGGGGATGCCTCTCGTCCTGAGGTTTTACGAGTTGCAGGAGTCGAGA GAGCCCGTGCGGTCGTGGTCACACTGGATGACCCGGAACAGGCGTTGAGA GCCGTTCAGAACATTCGCCGAGAATTTGAAGAGGTCAAGGTGTTTTGTCG CGCTCGCGATGCCAGACACCAGAAACTGTTGCAGGCTGCTGGAGCCACTG CTATAGTTCCTGAGCTGCTTGAGGCTTCATTGCTTCTAGGTGGGGCAGTT CTACTTGACTACGGGACTCCATTGGACGAAGTGAACTCTTTGGTTGAGGA GGCCAGATCGGAGAATCTTGCGGAGATTGGTGTGGCTGATGATGTCACTG CTACTATTGGTTCAATTTTCAAAGAGTCGAGATCCAGGGCACATCTCAAA CAAGAGCAAGAGTCATCAGATGCCGAAAATGGTGAGGTAGAAGAAGACGA GAGCGAAGAACCGGAACTCCTTCCTCTTAAACCTGATGTTAAAACTGAGG ACATCCCCCTCGTCTCGACTGCTACTGACGCCACGGAGGATATCTACGAG CCGGCGGAACAAGATGGTGTGCTCGTAGAAGACGAGGTCGCCCATGGAAA AAAGGCAGCTGTTGTTGAAGATGTAGAATCAGATTCTGTAAGGTAG back to topprotein sequence of Gchil4449.t1 >Gchil4449.t1 ID=Gchil4449.t1|Name=Gchil4449.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=882bp
MTALQRTMRRAMQGADPTRRSNSHRKHAGAQRNRRHPSPSRRPPDLPTPR PSSPPAMPPAASAAFVAALPLRQNRAPLRREPRSLRLSAVAYSDHRASDH RASPRAARSPWRKALTVITIAAQVLRPAPLRALNAPDLAVPTAAARARAS GRVFVASAVAVKPPPPPLAPSALGNLPEGSEKQSDSHSALLASLPARIER LRRSLLSLLHQPEDSHQHAVNDALVLLIATVLIIPLARRLGISPILGFLA AGVALGPNGFALVNDVRTTKALAELGVVFFLFEMGLELSTSKLKSLRADV FGLGTVQFFVSGAIITAAAVAAGITSQAAIVVGAALALSSSAFVLQLLAE RGEVGTRFGRAAFGILLFQDLVVVPVLVLIPLLAGSGAPAAVWRAVSVAS VKAVLALAFIIFMGNNALQPLFRFVARARSPEAFIAVILLTVLGTSSLTQ MLGLSDTLGAFLAGVMLAETKFRHQVEADIQPFRGLLLGLFFMTVGFSID LNLAWANMSKVVSLVSGLLAIKASVIAAAGVAFGLSVGSALRTGLLLSQG GEFAFVIFGLGQTVGVLPADLSQLLLLVVAISMAVTPLLAATGRQISSQL EKKRGLIGVRMEDADTADARDFVMVAGWGRVGQSVCEMLDAKLVRYMAFD MSPTRVIDARNKGLPVFFGDASRPEVLRVAGVERARAVVVTLDDPEQALR AVQNIRREFEEVKVFCRARDARHQKLLQAAGATAIVPELLEASLLLGGAV LLDYGTPLDEVNSLVEEARSENLAEIGVADDVTATIGSIFKESRSRAHLK QEQESSDAENGEVEEDESEEPELLPLKPDVKTEDIPLVSTATDATEDIYE PAEQDGVLVEDEVAHGKKAAVVEDVESDSVR* back to topmRNA from alignment at tig00004426_pilon:354257..356902- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil4449.t1 ID=Gchil4449.t1|Name=Gchil4449.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2646bp|location=Sequence derived from alignment at tig00004426_pilon:354257..356902- (Gracilaria chilensis NLEC103_M9 male) ATGACAGCATTACAGAGGACGATGCGCCGTGCCATGCAGGGCGCAGATCC
AACGCGCAGATCCAACTCGCACCGCAAACACGCTGGCGCACAGCGCAACC
GACGCCACCCCTCGCCTTCACGGCGCCCACCCGACCTCCCGACCCCGCGC
CCCTCAAGCCCGCCCGCCATGCCGCCAGCTGCGTCCGCGGCCTTCGTTGC
CGCGCTCCCGCTGCGTCAAAACCGCGCTCCTCTTCGTCGTGAGCCGCGGA
GCTTACGGCTGAGTGCGGTCGCCTACTCGGACCATCGCGCATCGGACCAT
CGCGCATCGCCGCGCGCTGCGCGCTCGCCATGGCGAAAGGCTCTCACCGT
CATCACCATCGCCGCGCAGGTGTTGCGTCCGGCACCGCTGCGCGCTTTGA
ACGCCCCCGATTTGGCCGTCCCCACCGCTGCGGCGCGCGCTCGTGCGTCC
GGACGCGTCTTCGTTGCCAGCGCTGTGGCTGTGAAGCCGCCGCCGCCGCC
GCTTGCACCCTCGGCGCTCGGGAACCTCCCTGAGGGCTCCGAGAAACAAT
CTGATTCACATAGTGCTCTGTTAGCTTCGCTGCCGGCCAGAATCGAGCGC
CTCCGACGCTCGCTGCTTTCGCTCCTTCATCAACCCGAAGACTCGCATCA
ACATGCCGTCAACGACGCGCTGGTGCTGCTCATTGCCACCGTCCTTATCA
TCCCGCTTGCGCGCCGCCTCGGCATCTCTCCCATTCTTGGATTTTTAGCC
GCCGGCGTGGCACTGGGGCCGAACGGATTCGCCCTCGTTAATGATGTGCG
CACCACAAAGGCTCTGGCAGAACTCGGTGTCGTTTTCTTTCTCTTCGAAA
TGGGCTTAGAACTCTCCACATCCAAGCTCAAGTCACTCCGCGCTGATGTC
TTCGGCCTGGGTACCGTTCAGTTCTTCGTTTCAGGAGCTATCATCACCGC
CGCTGCTGTCGCTGCGGGGATCACATCCCAAGCTGCTATTGTTGTCGGTG
CGGCCTTAGCCCTCAGTTCGAGCGCCTTTGTGCTCCAGCTACTGGCTGAG
CGCGGTGAAGTTGGCACTCGCTTTGGCCGCGCCGCCTTCGGCATTCTTTT
GTTCCAAGATCTTGTCGTCGTTCCGGTCCTCGTCCTCATACCTCTTCTAG
CCGGATCGGGCGCACCAGCTGCCGTGTGGCGCGCCGTAAGTGTTGCCAGT
GTCAAGGCTGTACTGGCTCTGGCTTTTATCATTTTCATGGGCAATAACGC
CTTGCAACCTCTCTTTCGCTTTGTTGCCCGCGCTAGAAGTCCCGAAGCCT
TTATTGCAGTCATCCTTCTCACTGTTCTCGGTACTTCCTCCCTCACACAG
ATGCTTGGATTGAGTGACACTCTCGGTGCCTTTTTAGCCGGCGTTATGCT
TGCAGAAACAAAGTTCAGGCATCAAGTCGAGGCCGACATCCAGCCGTTCC
GTGGTCTTCTTTTGGGTTTGTTCTTCATGACTGTGGGATTTTCAATTGAT
CTTAATCTGGCCTGGGCCAATATGAGCAAGGTGGTTTCGCTTGTGTCTGG
CTTGTTGGCGATCAAGGCTAGCGTTATCGCAGCTGCGGGAGTTGCCTTTG
GCCTAAGTGTCGGTTCCGCTCTACGCACTGGACTGCTCCTCTCTCAAGGG
GGAGAGTTTGCGTTCGTTATTTTCGGACTTGGACAAACAGTCGGCGTGTT
GCCTGCTGACTTGAGCCAGCTGCTTCTGCTCGTTGTGGCCATTTCTATGG
CAGTAACCCCACTCCTCGCTGCTACTGGAAGGCAAATATCGTCTCAATTA
GAGAAGAAACGAGGGCTCATCGGTGTGCGTATGGAGGATGCTGACACTGC
TGATGCTCGCGATTTCGTCATGGTAGCCGGCTGGGGGCGTGTTGGTCAAT
CCGTTTGTGAAATGCTCGATGCCAAGCTTGTGAGGTACATGGCATTCGAT
ATGTCTCCAACAAGAGTCATAGATGCACGAAACAAGGGCTTACCGGTCTT
CTTTGGGGATGCCTCTCGTCCTGAGGTTTTACGAGTTGCAGGAGTCGAGA
GAGCCCGTGCGGTCGTGGTCACACTGGATGACCCGGAACAGGCGTTGAGA
GCCGTTCAGAACATTCGCCGAGAATTTGAAGAGGTCAAGGTGTTTTGTCG
CGCTCGCGATGCCAGACACCAGAAACTGTTGCAGGCTGCTGGAGCCACTG
CTATAGTTCCTGAGCTGCTTGAGGCTTCATTGCTTCTAGGTGGGGCAGTT
CTACTTGACTACGGGACTCCATTGGACGAAGTGAACTCTTTGGTTGAGGA
GGCCAGATCGGAGAATCTTGCGGAGATTGGTGTGGCTGATGATGTCACTG
CTACTATTGGTTCAATTTTCAAAGAGTCGAGATCCAGGGCACATCTCAAA
CAAGAGCAAGAGTCATCAGATGCCGAAAATGGTGAGGTAGAAGAAGACGA
GAGCGAAGAACCGGAACTCCTTCCTCTTAAACCTGATGTTAAAACTGAGG
ACATCCCCCTCGTCTCGACTGCTACTGACGCCACGGAGGATATCTACGAG
CCGGCGGAACAAGATGGTGTGCTCGTAGAAGACGAGGTCGCCCATGGAAA
AAAGGCAGCTGTTGTTGAAGATGTAGAATCAGATTCTGTAAGGTAG back to topCoding sequence (CDS) from alignment at tig00004426_pilon:354257..356902- >Gchil4449.t1 ID=Gchil4449.t1|Name=Gchil4449.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2646bp|location=Sequence derived from alignment at tig00004426_pilon:354257..356902- (Gracilaria chilensis NLEC103_M9 male) ATGACAGCATTACAGAGGACGATGCGCCGTGCCATGCAGGGCGCAGATCC AACGCGCAGATCCAACTCGCACCGCAAACACGCTGGCGCACAGCGCAACC GACGCCACCCCTCGCCTTCACGGCGCCCACCCGACCTCCCGACCCCGCGC CCCTCAAGCCCGCCCGCCATGCCGCCAGCTGCGTCCGCGGCCTTCGTTGC CGCGCTCCCGCTGCGTCAAAACCGCGCTCCTCTTCGTCGTGAGCCGCGGA GCTTACGGCTGAGTGCGGTCGCCTACTCGGACCATCGCGCATCGGACCAT CGCGCATCGCCGCGCGCTGCGCGCTCGCCATGGCGAAAGGCTCTCACCGT CATCACCATCGCCGCGCAGGTGTTGCGTCCGGCACCGCTGCGCGCTTTGA ACGCCCCCGATTTGGCCGTCCCCACCGCTGCGGCGCGCGCTCGTGCGTCC GGACGCGTCTTCGTTGCCAGCGCTGTGGCTGTGAAGCCGCCGCCGCCGCC GCTTGCACCCTCGGCGCTCGGGAACCTCCCTGAGGGCTCCGAGAAACAAT CTGATTCACATAGTGCTCTGTTAGCTTCGCTGCCGGCCAGAATCGAGCGC CTCCGACGCTCGCTGCTTTCGCTCCTTCATCAACCCGAAGACTCGCATCA ACATGCCGTCAACGACGCGCTGGTGCTGCTCATTGCCACCGTCCTTATCA TCCCGCTTGCGCGCCGCCTCGGCATCTCTCCCATTCTTGGATTTTTAGCC GCCGGCGTGGCACTGGGGCCGAACGGATTCGCCCTCGTTAATGATGTGCG CACCACAAAGGCTCTGGCAGAACTCGGTGTCGTTTTCTTTCTCTTCGAAA TGGGCTTAGAACTCTCCACATCCAAGCTCAAGTCACTCCGCGCTGATGTC TTCGGCCTGGGTACCGTTCAGTTCTTCGTTTCAGGAGCTATCATCACCGC CGCTGCTGTCGCTGCGGGGATCACATCCCAAGCTGCTATTGTTGTCGGTG CGGCCTTAGCCCTCAGTTCGAGCGCCTTTGTGCTCCAGCTACTGGCTGAG CGCGGTGAAGTTGGCACTCGCTTTGGCCGCGCCGCCTTCGGCATTCTTTT GTTCCAAGATCTTGTCGTCGTTCCGGTCCTCGTCCTCATACCTCTTCTAG CCGGATCGGGCGCACCAGCTGCCGTGTGGCGCGCCGTAAGTGTTGCCAGT GTCAAGGCTGTACTGGCTCTGGCTTTTATCATTTTCATGGGCAATAACGC CTTGCAACCTCTCTTTCGCTTTGTTGCCCGCGCTAGAAGTCCCGAAGCCT TTATTGCAGTCATCCTTCTCACTGTTCTCGGTACTTCCTCCCTCACACAG ATGCTTGGATTGAGTGACACTCTCGGTGCCTTTTTAGCCGGCGTTATGCT TGCAGAAACAAAGTTCAGGCATCAAGTCGAGGCCGACATCCAGCCGTTCC GTGGTCTTCTTTTGGGTTTGTTCTTCATGACTGTGGGATTTTCAATTGAT CTTAATCTGGCCTGGGCCAATATGAGCAAGGTGGTTTCGCTTGTGTCTGG CTTGTTGGCGATCAAGGCTAGCGTTATCGCAGCTGCGGGAGTTGCCTTTG GCCTAAGTGTCGGTTCCGCTCTACGCACTGGACTGCTCCTCTCTCAAGGG GGAGAGTTTGCGTTCGTTATTTTCGGACTTGGACAAACAGTCGGCGTGTT GCCTGCTGACTTGAGCCAGCTGCTTCTGCTCGTTGTGGCCATTTCTATGG CAGTAACCCCACTCCTCGCTGCTACTGGAAGGCAAATATCGTCTCAATTA GAGAAGAAACGAGGGCTCATCGGTGTGCGTATGGAGGATGCTGACACTGC TGATGCTCGCGATTTCGTCATGGTAGCCGGCTGGGGGCGTGTTGGTCAAT CCGTTTGTGAAATGCTCGATGCCAAGCTTGTGAGGTACATGGCATTCGAT ATGTCTCCAACAAGAGTCATAGATGCACGAAACAAGGGCTTACCGGTCTT CTTTGGGGATGCCTCTCGTCCTGAGGTTTTACGAGTTGCAGGAGTCGAGA GAGCCCGTGCGGTCGTGGTCACACTGGATGACCCGGAACAGGCGTTGAGA GCCGTTCAGAACATTCGCCGAGAATTTGAAGAGGTCAAGGTGTTTTGTCG CGCTCGCGATGCCAGACACCAGAAACTGTTGCAGGCTGCTGGAGCCACTG CTATAGTTCCTGAGCTGCTTGAGGCTTCATTGCTTCTAGGTGGGGCAGTT CTACTTGACTACGGGACTCCATTGGACGAAGTGAACTCTTTGGTTGAGGA GGCCAGATCGGAGAATCTTGCGGAGATTGGTGTGGCTGATGATGTCACTG CTACTATTGGTTCAATTTTCAAAGAGTCGAGATCCAGGGCACATCTCAAA CAAGAGCAAGAGTCATCAGATGCCGAAAATGGTGAGGTAGAAGAAGACGA GAGCGAAGAACCGGAACTCCTTCCTCTTAAACCTGATGTTAAAACTGAGG ACATCCCCCTCGTCTCGACTGCTACTGACGCCACGGAGGATATCTACGAG CCGGCGGAACAAGATGGTGTGCTCGTAGAAGACGAGGTCGCCCATGGAAA AAAGGCAGCTGTTGTTGAAGATGTAGAATCAGATTCTGTAAGGTAG back to top
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