Gchil4153.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil4153.t1
Unique NameGchil4153.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length514
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:1048050..1049591 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4153Gchil4153Gracilaria chilensis NLEC103_M9 malegenetig00004373_pilon 1048050..1049591 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4153.t1.start1Gchil4153.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004373_pilon 1048050..1048052 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4153.t1.CDS1Gchil4153.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004373_pilon 1048050..1049591 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4153.t1.exon1Gchil4153.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004373_pilon 1048050..1049591 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4153.t1.stop1Gchil4153.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004373_pilon 1049589..1049591 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil4153.t1Gchil4153.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004373_pilon 1048050..1049591 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil4153.t1 ID=Gchil4153.t1|Name=Gchil4153.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=514bp
MRLVSCSMEFCMLYSSSTLHALVRIALIAVLHEIEERSATYVSRDYRRCV
HYLIDVFQDKKIKSQELQEFRDTAVLILRRVSRLFRDSRKRTAMSIIRKQ
QRKNSWPSLVAVLRKEEKRLMAEYTRVSGNVPSDTNKVRSLKRSRNRRKH
VHERDFIYQRGDDFDEDLLIENNSAGSESGDKYSVSLDYLDNEFEAPSTK
FTSTRPQRVWPLKPRMRDSEWKSRAQIRKNSGMTHEFRSDSGKEAVGSVR
HGSKRNMIHPKDDEDSVEYGGLESQDFPSAVVGSRPDDIEDQRDQECERD
PIQQSSEELQDPGLVLGNSITLSDELGQAKLHGRETCVEDLHKASLALDA
LGPDDPLRMADESTRRRAWRKHGIKRSPREASPIPDSEGVQIMKRRKPNP
RRLQKSPEIRHRDEGKNAYGQKLKRGRFLPHEDEWILQGIKKYGWGAWKE
IVNEYYRDVDYTRNPVSVKDRARTLDIDPDKYPKHGLRGRPRYFQEGPEE
ANNEEDIDKDEDQ*
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spliced messenger RNA

>Gchil4153.t1 ID=Gchil4153.t1|Name=Gchil4153.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1542bp|location=Sequence derived from alignment at tig00004373_pilon:1048050..1049591+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGTCTGGTATCATGTTCTATGGAGTTTTGTATGCTTTATTCCAGTTC
TACCCTCCATGCGTTGGTCAGAATTGCATTAATTGCAGTGCTTCACGAGA
TTGAAGAAAGGTCGGCAACGTATGTCTCGCGGGATTACCGGCGATGTGTT
CACTATTTGATTGACGTTTTTCAAGACAAGAAGATCAAGTCTCAAGAGCT
TCAAGAGTTCCGAGATACAGCGGTTTTAATTTTGAGGAGAGTATCAAGGC
TTTTCCGAGACTCTAGAAAAAGGACAGCGATGTCCATTATTAGGAAGCAA
CAAAGGAAGAATTCTTGGCCTAGTCTCGTGGCTGTGTTGAGGAAAGAAGA
AAAGAGATTGATGGCTGAATATACAAGGGTATCCGGAAATGTACCTTCTG
ATACAAACAAAGTAAGAAGCCTTAAACGCTCGAGGAATAGGCGCAAACAT
GTCCATGAACGGGATTTTATCTATCAACGTGGTGATGACTTCGACGAAGA
TCTACTAATCGAAAACAATTCGGCGGGGAGCGAGTCAGGTGACAAATATA
GCGTCTCACTCGATTATCTAGACAACGAATTCGAAGCTCCCAGTACAAAA
TTCACTTCCACTCGTCCCCAACGTGTATGGCCGTTGAAACCACGTATGCG
CGACTCTGAGTGGAAAAGTAGAGCTCAAATTCGAAAGAACAGCGGGATGA
CACATGAATTTCGTAGTGATTCCGGGAAAGAAGCTGTCGGCAGCGTTCGT
CATGGTTCAAAGCGAAACATGATACACCCCAAAGATGACGAAGATTCTGT
AGAGTATGGTGGGTTGGAATCACAAGACTTTCCTTCGGCTGTTGTAGGTT
CAAGACCGGATGATATAGAGGATCAAAGAGATCAAGAATGTGAAAGGGAT
CCAATTCAACAAAGTTCAGAGGAACTCCAAGACCCTGGATTGGTTTTGGG
TAACAGCATCACTCTTAGTGATGAGTTGGGGCAAGCGAAATTACATGGGA
GGGAAACATGTGTGGAAGATCTTCACAAGGCCTCTTTAGCCTTGGACGCA
CTTGGTCCAGATGATCCCCTGCGTATGGCTGATGAAAGTACCAGGAGGCG
GGCTTGGCGCAAACATGGTATAAAACGCTCTCCGCGAGAGGCTAGCCCTA
TCCCGGATTCTGAGGGAGTTCAGATCATGAAACGAAGGAAACCAAATCCA
AGGCGTCTACAGAAGTCTCCTGAAATCCGCCACAGAGACGAAGGAAAAAA
TGCATACGGTCAGAAACTTAAGCGCGGTCGCTTTTTGCCTCATGAAGACG
AATGGATATTACAAGGGATTAAGAAATATGGATGGGGTGCATGGAAAGAG
ATTGTCAACGAGTATTATAGAGATGTCGATTATACGCGAAATCCTGTAAG
CGTAAAAGATCGCGCAAGAACTTTGGACATAGATCCTGACAAGTATCCCA
AACACGGGTTGAGAGGAAGACCAAGGTATTTTCAGGAAGGACCCGAGGAA
GCAAACAATGAGGAAGATATCGACAAGGACGAAGATCAGTAG
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protein sequence of Gchil4153.t1

>Gchil4153.t1 ID=Gchil4153.t1|Name=Gchil4153.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=514bp
MRLVSCSMEFCMLYSSSTLHALVRIALIAVLHEIEERSATYVSRDYRRCV
HYLIDVFQDKKIKSQELQEFRDTAVLILRRVSRLFRDSRKRTAMSIIRKQ
QRKNSWPSLVAVLRKEEKRLMAEYTRVSGNVPSDTNKVRSLKRSRNRRKH
VHERDFIYQRGDDFDEDLLIENNSAGSESGDKYSVSLDYLDNEFEAPSTK
FTSTRPQRVWPLKPRMRDSEWKSRAQIRKNSGMTHEFRSDSGKEAVGSVR
HGSKRNMIHPKDDEDSVEYGGLESQDFPSAVVGSRPDDIEDQRDQECERD
PIQQSSEELQDPGLVLGNSITLSDELGQAKLHGRETCVEDLHKASLALDA
LGPDDPLRMADESTRRRAWRKHGIKRSPREASPIPDSEGVQIMKRRKPNP
RRLQKSPEIRHRDEGKNAYGQKLKRGRFLPHEDEWILQGIKKYGWGAWKE
IVNEYYRDVDYTRNPVSVKDRARTLDIDPDKYPKHGLRGRPRYFQEGPEE
ANNEEDIDKDEDQ*
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mRNA from alignment at tig00004373_pilon:1048050..1049591+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil4153.t1 ID=Gchil4153.t1|Name=Gchil4153.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1542bp|location=Sequence derived from alignment at tig00004373_pilon:1048050..1049591+ (Gracilaria chilensis NLEC103_M9 male)
ATGCGTCTGGTATCATGTTCTATGGAGTTTTGTATGCTTTATTCCAGTTC
TACCCTCCATGCGTTGGTCAGAATTGCATTAATTGCAGTGCTTCACGAGA
TTGAAGAAAGGTCGGCAACGTATGTCTCGCGGGATTACCGGCGATGTGTT
CACTATTTGATTGACGTTTTTCAAGACAAGAAGATCAAGTCTCAAGAGCT
TCAAGAGTTCCGAGATACAGCGGTTTTAATTTTGAGGAGAGTATCAAGGC
TTTTCCGAGACTCTAGAAAAAGGACAGCGATGTCCATTATTAGGAAGCAA
CAAAGGAAGAATTCTTGGCCTAGTCTCGTGGCTGTGTTGAGGAAAGAAGA
AAAGAGATTGATGGCTGAATATACAAGGGTATCCGGAAATGTACCTTCTG
ATACAAACAAAGTAAGAAGCCTTAAACGCTCGAGGAATAGGCGCAAACAT
GTCCATGAACGGGATTTTATCTATCAACGTGGTGATGACTTCGACGAAGA
TCTACTAATCGAAAACAATTCGGCGGGGAGCGAGTCAGGTGACAAATATA
GCGTCTCACTCGATTATCTAGACAACGAATTCGAAGCTCCCAGTACAAAA
TTCACTTCCACTCGTCCCCAACGTGTATGGCCGTTGAAACCACGTATGCG
CGACTCTGAGTGGAAAAGTAGAGCTCAAATTCGAAAGAACAGCGGGATGA
CACATGAATTTCGTAGTGATTCCGGGAAAGAAGCTGTCGGCAGCGTTCGT
CATGGTTCAAAGCGAAACATGATACACCCCAAAGATGACGAAGATTCTGT
AGAGTATGGTGGGTTGGAATCACAAGACTTTCCTTCGGCTGTTGTAGGTT
CAAGACCGGATGATATAGAGGATCAAAGAGATCAAGAATGTGAAAGGGAT
CCAATTCAACAAAGTTCAGAGGAACTCCAAGACCCTGGATTGGTTTTGGG
TAACAGCATCACTCTTAGTGATGAGTTGGGGCAAGCGAAATTACATGGGA
GGGAAACATGTGTGGAAGATCTTCACAAGGCCTCTTTAGCCTTGGACGCA
CTTGGTCCAGATGATCCCCTGCGTATGGCTGATGAAAGTACCAGGAGGCG
GGCTTGGCGCAAACATGGTATAAAACGCTCTCCGCGAGAGGCTAGCCCTA
TCCCGGATTCTGAGGGAGTTCAGATCATGAAACGAAGGAAACCAAATCCA
AGGCGTCTACAGAAGTCTCCTGAAATCCGCCACAGAGACGAAGGAAAAAA
TGCATACGGTCAGAAACTTAAGCGCGGTCGCTTTTTGCCTCATGAAGACG
AATGGATATTACAAGGGATTAAGAAATATGGATGGGGTGCATGGAAAGAG
ATTGTCAACGAGTATTATAGAGATGTCGATTATACGCGAAATCCTGTAAG
CGTAAAAGATCGCGCAAGAACTTTGGACATAGATCCTGACAAGTATCCCA
AACACGGGTTGAGAGGAAGACCAAGGTATTTTCAGGAAGGACCCGAGGAA
GCAAACAATGAGGAAGATATCGACAAGGACGAAGATCAGTAG
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Coding sequence (CDS) from alignment at tig00004373_pilon:1048050..1049591+

>Gchil4153.t1 ID=Gchil4153.t1|Name=Gchil4153.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1542bp|location=Sequence derived from alignment at tig00004373_pilon:1048050..1049591+ (Gracilaria chilensis NLEC103_M9 male)
ATGCGTCTGGTATCATGTTCTATGGAGTTTTGTATGCTTTATTCCAGTTC
TACCCTCCATGCGTTGGTCAGAATTGCATTAATTGCAGTGCTTCACGAGA
TTGAAGAAAGGTCGGCAACGTATGTCTCGCGGGATTACCGGCGATGTGTT
CACTATTTGATTGACGTTTTTCAAGACAAGAAGATCAAGTCTCAAGAGCT
TCAAGAGTTCCGAGATACAGCGGTTTTAATTTTGAGGAGAGTATCAAGGC
TTTTCCGAGACTCTAGAAAAAGGACAGCGATGTCCATTATTAGGAAGCAA
CAAAGGAAGAATTCTTGGCCTAGTCTCGTGGCTGTGTTGAGGAAAGAAGA
AAAGAGATTGATGGCTGAATATACAAGGGTATCCGGAAATGTACCTTCTG
ATACAAACAAAGTAAGAAGCCTTAAACGCTCGAGGAATAGGCGCAAACAT
GTCCATGAACGGGATTTTATCTATCAACGTGGTGATGACTTCGACGAAGA
TCTACTAATCGAAAACAATTCGGCGGGGAGCGAGTCAGGTGACAAATATA
GCGTCTCACTCGATTATCTAGACAACGAATTCGAAGCTCCCAGTACAAAA
TTCACTTCCACTCGTCCCCAACGTGTATGGCCGTTGAAACCACGTATGCG
CGACTCTGAGTGGAAAAGTAGAGCTCAAATTCGAAAGAACAGCGGGATGA
CACATGAATTTCGTAGTGATTCCGGGAAAGAAGCTGTCGGCAGCGTTCGT
CATGGTTCAAAGCGAAACATGATACACCCCAAAGATGACGAAGATTCTGT
AGAGTATGGTGGGTTGGAATCACAAGACTTTCCTTCGGCTGTTGTAGGTT
CAAGACCGGATGATATAGAGGATCAAAGAGATCAAGAATGTGAAAGGGAT
CCAATTCAACAAAGTTCAGAGGAACTCCAAGACCCTGGATTGGTTTTGGG
TAACAGCATCACTCTTAGTGATGAGTTGGGGCAAGCGAAATTACATGGGA
GGGAAACATGTGTGGAAGATCTTCACAAGGCCTCTTTAGCCTTGGACGCA
CTTGGTCCAGATGATCCCCTGCGTATGGCTGATGAAAGTACCAGGAGGCG
GGCTTGGCGCAAACATGGTATAAAACGCTCTCCGCGAGAGGCTAGCCCTA
TCCCGGATTCTGAGGGAGTTCAGATCATGAAACGAAGGAAACCAAATCCA
AGGCGTCTACAGAAGTCTCCTGAAATCCGCCACAGAGACGAAGGAAAAAA
TGCATACGGTCAGAAACTTAAGCGCGGTCGCTTTTTGCCTCATGAAGACG
AATGGATATTACAAGGGATTAAGAAATATGGATGGGGTGCATGGAAAGAG
ATTGTCAACGAGTATTATAGAGATGTCGATTATACGCGAAATCCTGTAAG
CGTAAAAGATCGCGCAAGAACTTTGGACATAGATCCTGACAAGTATCCCA
AACACGGGTTGAGAGGAAGACCAAGGTATTTTCAGGAAGGACCCGAGGAA
GCAAACAATGAGGAAGATATCGACAAGGACGAAGATCAGTAG
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