|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil3876.t1 ID=Gchil3876.t1|Name=Gchil3876.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=832bp MEEALKLRKGARDAFYRARKELALVKVGRSFEMGLRDLALEKGKSRLGKF LRRQRRFLDAVTAVIEKASDGHQIHESILFCEKQKWDPTQYDITVEIDQL FHSVVTSPTTKLRSFVDKNVSTTLGKFAKNLLRRIIQPPLEVLIGMGNTL LATYLKLDDISEQKKRLQVSILRIFMYVSDCYRYIFDPKKAKSTAELMRF SDSTDAEAYMRIAMNAAVETDCDQDITPFFHYCVFLDNRNVAIESTEAKL VHRYVKVLRDTMDEKAMGSCPLRETVILVFVDAIWALLVADMKEASSKVR DEQLWKALVEYVNAASQKNVLHMAGAVMFSHHRSAVKKTGSSTNPLVWEV ADYLLFRFIFVLSESVSDRLKQARTLIRNRKRNRRRAMQKKRKKDATTTV VDGAELNAFEALRHVGPLEELVPHLGTLSFMAHYLALKKESVGHANDDHV SAKVLQGLRSVVNEIRLFNELTCTLRLSDYVESRQAKSSRVLPPLHEDVM LGNFLLCDRLGMLKSVQLDSATLETVFNAGPPNIAEVICDESSGTYETFV EGTAVRYSKVFAMQSAQEAKFNADELGLPATQSITATAIRKQRILTLISE LEKLGGGRIARMLIQVPKIPRTEAPVSKRDSSLSPPLPGQPYFQECQTHE EEETFNIDVHLTKRRRIIGSCTPGHSEAQRALHSGGENDLVASDSPFVSD NHYGASQRTIQKQTNSTKQLGTDVNVYSGRCSGEPSHSTPQTRRPVHDDE VAFQDELLPAESYSTAFRLQQLMYPDHKHSMSGLWCGIPENPVWRVPCSE PSYVNITTFSALEYFTREGCDKTFDKTQRTF* back to topspliced messenger RNA >Gchil3876.t1 ID=Gchil3876.t1|Name=Gchil3876.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2496bp|location=Sequence derived from alignment at tig00000010_pilon:1139119..1141708+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGAAGAAGCTCTGAAGCTGCGGAAAGGGGCGAGAGACGCCTTCTACAG GGCTCGCAAAGAATTGGCGCTGGTCAAAGTGGGGCGCTCTTTTGAAATGG GTCTCAGAGATCTTGCGCTAGAGAAAGGCAAGTCACGATTGGGCAAATTT CTTAGACGTCAGCGCCGTTTTCTAGATGCCGTGACTGCCGTTATCGAAAA AGCAAGTGATGGTCACCAGATTCACGAATCAATTCTGTTCTGTGAGAAAC AAAAATGGGATCCCACCCAGTATGACATCACCGTTGAGATAGACCAGCTT TTCCATTCAGTAGTAACCAGCCCTACCACCAAACTGCGCTCGTTTGTAGA CAAGAATGTGAGTACAACTCTAGGGAAATTTGCAAAAAACCTGTTACGTA GAATTATTCAACCACCTCTGGAAGTGTTGATCGGGATGGGGAATACTCTT CTAGCCACTTATCTCAAATTGGATGATATCTCAGAGCAGAAAAAAAGACT TCAAGTTTCTATCCTACGCATCTTCATGTACGTTAGCGATTGCTATCGGT ACATATTTGATCCCAAGAAGGCCAAGAGTACAGCTGAACTCATGCGGTTT TCGGATTCAACCGATGCAGAAGCATACATGCGTATAGCAATGAATGCGGC TGTTGAAACAGATTGTGATCAAGACATTACCCCTTTCTTTCATTATTGTG TTTTTTTGGATAATCGAAACGTTGCCATTGAAAGCACCGAAGCAAAGCTT GTTCATCGATATGTGAAGGTTTTAAGGGATACTATGGATGAAAAAGCAAT GGGTTCGTGTCCTCTACGGGAGACAGTGATTTTGGTGTTTGTAGATGCTA TTTGGGCTTTACTTGTGGCTGATATGAAAGAAGCATCAAGTAAAGTTCGA GACGAACAATTATGGAAGGCGTTGGTCGAATACGTTAATGCAGCCTCTCA AAAGAATGTTCTACACATGGCAGGTGCTGTCATGTTTTCTCACCACAGAT CCGCGGTAAAGAAAACCGGCAGCAGCACGAATCCTCTCGTATGGGAAGTC GCCGACTATCTCCTTTTCCGATTCATATTTGTTCTCTCTGAAAGCGTTTC AGATAGGTTGAAGCAGGCAAGGACTTTGATTCGGAATAGAAAAAGGAATA GACGACGTGCGATGCAAAAGAAGCGAAAGAAAGATGCAACTACTACCGTT GTCGACGGAGCGGAGCTAAATGCTTTTGAGGCTTTGAGACATGTTGGACC ACTGGAAGAACTGGTTCCACATCTAGGGACTTTGAGTTTTATGGCACACT ATCTTGCGTTGAAAAAGGAGTCTGTTGGTCATGCGAATGACGATCATGTT TCTGCAAAAGTATTACAAGGATTGCGATCAGTGGTGAATGAAATTCGACT CTTCAATGAGCTAACATGCACTCTGCGCTTGAGCGACTACGTTGAAAGCA GGCAGGCCAAAAGCTCTAGAGTTCTGCCCCCATTGCACGAAGACGTCATG CTCGGCAACTTCTTGTTGTGTGACAGACTCGGAATGTTGAAGTCTGTGCA GCTAGACAGTGCAACTCTTGAAACAGTTTTTAATGCTGGACCACCGAACA TAGCAGAAGTTATTTGCGACGAGTCTTCAGGAACCTACGAAACTTTCGTC GAGGGTACTGCTGTAAGATACTCGAAAGTATTTGCAATGCAGTCTGCTCA AGAAGCCAAATTTAATGCGGACGAGTTAGGTCTTCCTGCAACCCAGTCCA TCACAGCGACAGCCATTCGAAAACAGCGTATCTTGACTCTGATATCTGAG CTAGAAAAGTTGGGGGGAGGCAGAATTGCCCGTATGTTAATACAAGTTCC TAAGATTCCACGAACTGAAGCCCCAGTCTCAAAACGCGATTCTTCTCTAT CTCCGCCTCTTCCCGGTCAGCCATACTTCCAAGAGTGCCAAACCCATGAA GAAGAGGAAACCTTTAACATTGACGTACACTTGACAAAACGACGAAGAAT TATAGGGTCGTGCACGCCTGGACATTCTGAAGCGCAACGCGCATTACATA GTGGGGGTGAAAACGATTTAGTCGCTTCAGATTCACCATTTGTATCTGAT AATCATTATGGAGCATCCCAAAGAACAATCCAGAAACAGACCAATTCAAC AAAGCAGTTGGGAACAGACGTCAACGTTTATTCGGGCAGGTGCTCTGGAG AACCCTCCCATTCCACTCCCCAAACTCGACGTCCAGTACATGACGACGAG GTTGCTTTTCAAGATGAGCTGTTACCCGCAGAAAGCTATAGCACTGCGTT TCGACTGCAGCAGCTGATGTACCCAGATCATAAGCACTCAATGTCGGGAC TCTGGTGCGGAATTCCAGAAAATCCTGTTTGGCGAGTACCATGTTCTGAA CCTTCTTATGTCAACATCACCACGTTTTCTGCTCTCGAATATTTTACGAG AGAGGGCTGCGATAAAACGTTCGATAAAACACAGCGTACTTTCTGA back to topprotein sequence of Gchil3876.t1 >Gchil3876.t1 ID=Gchil3876.t1|Name=Gchil3876.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=832bp
MEEALKLRKGARDAFYRARKELALVKVGRSFEMGLRDLALEKGKSRLGKF LRRQRRFLDAVTAVIEKASDGHQIHESILFCEKQKWDPTQYDITVEIDQL FHSVVTSPTTKLRSFVDKNVSTTLGKFAKNLLRRIIQPPLEVLIGMGNTL LATYLKLDDISEQKKRLQVSILRIFMYVSDCYRYIFDPKKAKSTAELMRF SDSTDAEAYMRIAMNAAVETDCDQDITPFFHYCVFLDNRNVAIESTEAKL VHRYVKVLRDTMDEKAMGSCPLRETVILVFVDAIWALLVADMKEASSKVR DEQLWKALVEYVNAASQKNVLHMAGAVMFSHHRSAVKKTGSSTNPLVWEV ADYLLFRFIFVLSESVSDRLKQARTLIRNRKRNRRRAMQKKRKKDATTTV VDGAELNAFEALRHVGPLEELVPHLGTLSFMAHYLALKKESVGHANDDHV SAKVLQGLRSVVNEIRLFNELTCTLRLSDYVESRQAKSSRVLPPLHEDVM LGNFLLCDRLGMLKSVQLDSATLETVFNAGPPNIAEVICDESSGTYETFV EGTAVRYSKVFAMQSAQEAKFNADELGLPATQSITATAIRKQRILTLISE LEKLGGGRIARMLIQVPKIPRTEAPVSKRDSSLSPPLPGQPYFQECQTHE EEETFNIDVHLTKRRRIIGSCTPGHSEAQRALHSGGENDLVASDSPFVSD NHYGASQRTIQKQTNSTKQLGTDVNVYSGRCSGEPSHSTPQTRRPVHDDE VAFQDELLPAESYSTAFRLQQLMYPDHKHSMSGLWCGIPENPVWRVPCSE PSYVNITTFSALEYFTREGCDKTFDKTQRTF* back to topmRNA from alignment at tig00000010_pilon:1139119..1141708+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil3876.t1 ID=Gchil3876.t1|Name=Gchil3876.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2590bp|location=Sequence derived from alignment at tig00000010_pilon:1139119..1141708+ (Gracilaria chilensis NLEC103_M9 male) ATGGAAGAAGCTCTGAAGCTGCGGAAAGGGGCGAGAGACGCCTTCTACAG
GGCTCGCAAAGAATTGGCGCTGGTCAAAGTGGGGCGCTCTTTTGAAATGG
GTCTCAGAGATCTTGCGCTAGAGAAAGGCAAGTCACGATTGGGCAAATTT
CTTAGACGTCAGCGCCGTTTTCTAGATGCCGTGACTGCCGTTATCGAAAA
AGCAGTACGTCCAATATAGAATTATCAGGGTTCCTGGTCGTAGTGTTACT
GCTCTCATATTTCTTACAATTCCTGTTCTTTCTTTCCTTGCTTCGCAGAG
TGATGGTCACCAGATTCACGAATCAATTCTGTTCTGTGAGAAACAAAAAT
GGGATCCCACCCAGTATGACATCACCGTTGAGATAGACCAGCTTTTCCAT
TCAGTAGTAACCAGCCCTACCACCAAACTGCGCTCGTTTGTAGACAAGAA
TGTGAGTACAACTCTAGGGAAATTTGCAAAAAACCTGTTACGTAGAATTA
TTCAACCACCTCTGGAAGTGTTGATCGGGATGGGGAATACTCTTCTAGCC
ACTTATCTCAAATTGGATGATATCTCAGAGCAGAAAAAAAGACTTCAAGT
TTCTATCCTACGCATCTTCATGTACGTTAGCGATTGCTATCGGTACATAT
TTGATCCCAAGAAGGCCAAGAGTACAGCTGAACTCATGCGGTTTTCGGAT
TCAACCGATGCAGAAGCATACATGCGTATAGCAATGAATGCGGCTGTTGA
AACAGATTGTGATCAAGACATTACCCCTTTCTTTCATTATTGTGTTTTTT
TGGATAATCGAAACGTTGCCATTGAAAGCACCGAAGCAAAGCTTGTTCAT
CGATATGTGAAGGTTTTAAGGGATACTATGGATGAAAAAGCAATGGGTTC
GTGTCCTCTACGGGAGACAGTGATTTTGGTGTTTGTAGATGCTATTTGGG
CTTTACTTGTGGCTGATATGAAAGAAGCATCAAGTAAAGTTCGAGACGAA
CAATTATGGAAGGCGTTGGTCGAATACGTTAATGCAGCCTCTCAAAAGAA
TGTTCTACACATGGCAGGTGCTGTCATGTTTTCTCACCACAGATCCGCGG
TAAAGAAAACCGGCAGCAGCACGAATCCTCTCGTATGGGAAGTCGCCGAC
TATCTCCTTTTCCGATTCATATTTGTTCTCTCTGAAAGCGTTTCAGATAG
GTTGAAGCAGGCAAGGACTTTGATTCGGAATAGAAAAAGGAATAGACGAC
GTGCGATGCAAAAGAAGCGAAAGAAAGATGCAACTACTACCGTTGTCGAC
GGAGCGGAGCTAAATGCTTTTGAGGCTTTGAGACATGTTGGACCACTGGA
AGAACTGGTTCCACATCTAGGGACTTTGAGTTTTATGGCACACTATCTTG
CGTTGAAAAAGGAGTCTGTTGGTCATGCGAATGACGATCATGTTTCTGCA
AAAGTATTACAAGGATTGCGATCAGTGGTGAATGAAATTCGACTCTTCAA
TGAGCTAACATGCACTCTGCGCTTGAGCGACTACGTTGAAAGCAGGCAGG
CCAAAAGCTCTAGAGTTCTGCCCCCATTGCACGAAGACGTCATGCTCGGC
AACTTCTTGTTGTGTGACAGACTCGGAATGTTGAAGTCTGTGCAGCTAGA
CAGTGCAACTCTTGAAACAGTTTTTAATGCTGGACCACCGAACATAGCAG
AAGTTATTTGCGACGAGTCTTCAGGAACCTACGAAACTTTCGTCGAGGGT
ACTGCTGTAAGATACTCGAAAGTATTTGCAATGCAGTCTGCTCAAGAAGC
CAAATTTAATGCGGACGAGTTAGGTCTTCCTGCAACCCAGTCCATCACAG
CGACAGCCATTCGAAAACAGCGTATCTTGACTCTGATATCTGAGCTAGAA
AAGTTGGGGGGAGGCAGAATTGCCCGTATGTTAATACAAGTTCCTAAGAT
TCCACGAACTGAAGCCCCAGTCTCAAAACGCGATTCTTCTCTATCTCCGC
CTCTTCCCGGTCAGCCATACTTCCAAGAGTGCCAAACCCATGAAGAAGAG
GAAACCTTTAACATTGACGTACACTTGACAAAACGACGAAGAATTATAGG
GTCGTGCACGCCTGGACATTCTGAAGCGCAACGCGCATTACATAGTGGGG
GTGAAAACGATTTAGTCGCTTCAGATTCACCATTTGTATCTGATAATCAT
TATGGAGCATCCCAAAGAACAATCCAGAAACAGACCAATTCAACAAAGCA
GTTGGGAACAGACGTCAACGTTTATTCGGGCAGGTGCTCTGGAGAACCCT
CCCATTCCACTCCCCAAACTCGACGTCCAGTACATGACGACGAGGTTGCT
TTTCAAGATGAGCTGTTACCCGCAGAAAGCTATAGCACTGCGTTTCGACT
GCAGCAGCTGATGTACCCAGATCATAAGCACTCAATGTCGGGACTCTGGT
GCGGAATTCCAGAAAATCCTGTTTGGCGAGTACCATGTTCTGAACCTTCT
TATGTCAACATCACCACGTTTTCTGCTCTCGAATATTTTACGAGAGAGGG
CTGCGATAAAACGTTCGATAAAACACAGCGTACTTTCTGA back to topCoding sequence (CDS) from alignment at tig00000010_pilon:1139119..1141708+ >Gchil3876.t1 ID=Gchil3876.t1|Name=Gchil3876.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2496bp|location=Sequence derived from alignment at tig00000010_pilon:1139119..1141708+ (Gracilaria chilensis NLEC103_M9 male) ATGGAAGAAGCTCTGAAGCTGCGGAAAGGGGCGAGAGACGCCTTCTACAG GGCTCGCAAAGAATTGGCGCTGGTCAAAGTGGGGCGCTCTTTTGAAATGG GTCTCAGAGATCTTGCGCTAGAGAAAGGCAAGTCACGATTGGGCAAATTT CTTAGACGTCAGCGCCGTTTTCTAGATGCCGTGACTGCCGTTATCGAAAA AGCAAGTGATGGTCACCAGATTCACGAATCAATTCTGTTCTGTGAGAAAC AAAAATGGGATCCCACCCAGTATGACATCACCGTTGAGATAGACCAGCTT TTCCATTCAGTAGTAACCAGCCCTACCACCAAACTGCGCTCGTTTGTAGA CAAGAATGTGAGTACAACTCTAGGGAAATTTGCAAAAAACCTGTTACGTA GAATTATTCAACCACCTCTGGAAGTGTTGATCGGGATGGGGAATACTCTT CTAGCCACTTATCTCAAATTGGATGATATCTCAGAGCAGAAAAAAAGACT TCAAGTTTCTATCCTACGCATCTTCATGTACGTTAGCGATTGCTATCGGT ACATATTTGATCCCAAGAAGGCCAAGAGTACAGCTGAACTCATGCGGTTT TCGGATTCAACCGATGCAGAAGCATACATGCGTATAGCAATGAATGCGGC TGTTGAAACAGATTGTGATCAAGACATTACCCCTTTCTTTCATTATTGTG TTTTTTTGGATAATCGAAACGTTGCCATTGAAAGCACCGAAGCAAAGCTT GTTCATCGATATGTGAAGGTTTTAAGGGATACTATGGATGAAAAAGCAAT GGGTTCGTGTCCTCTACGGGAGACAGTGATTTTGGTGTTTGTAGATGCTA TTTGGGCTTTACTTGTGGCTGATATGAAAGAAGCATCAAGTAAAGTTCGA GACGAACAATTATGGAAGGCGTTGGTCGAATACGTTAATGCAGCCTCTCA AAAGAATGTTCTACACATGGCAGGTGCTGTCATGTTTTCTCACCACAGAT CCGCGGTAAAGAAAACCGGCAGCAGCACGAATCCTCTCGTATGGGAAGTC GCCGACTATCTCCTTTTCCGATTCATATTTGTTCTCTCTGAAAGCGTTTC AGATAGGTTGAAGCAGGCAAGGACTTTGATTCGGAATAGAAAAAGGAATA GACGACGTGCGATGCAAAAGAAGCGAAAGAAAGATGCAACTACTACCGTT GTCGACGGAGCGGAGCTAAATGCTTTTGAGGCTTTGAGACATGTTGGACC ACTGGAAGAACTGGTTCCACATCTAGGGACTTTGAGTTTTATGGCACACT ATCTTGCGTTGAAAAAGGAGTCTGTTGGTCATGCGAATGACGATCATGTT TCTGCAAAAGTATTACAAGGATTGCGATCAGTGGTGAATGAAATTCGACT CTTCAATGAGCTAACATGCACTCTGCGCTTGAGCGACTACGTTGAAAGCA GGCAGGCCAAAAGCTCTAGAGTTCTGCCCCCATTGCACGAAGACGTCATG CTCGGCAACTTCTTGTTGTGTGACAGACTCGGAATGTTGAAGTCTGTGCA GCTAGACAGTGCAACTCTTGAAACAGTTTTTAATGCTGGACCACCGAACA TAGCAGAAGTTATTTGCGACGAGTCTTCAGGAACCTACGAAACTTTCGTC GAGGGTACTGCTGTAAGATACTCGAAAGTATTTGCAATGCAGTCTGCTCA AGAAGCCAAATTTAATGCGGACGAGTTAGGTCTTCCTGCAACCCAGTCCA TCACAGCGACAGCCATTCGAAAACAGCGTATCTTGACTCTGATATCTGAG CTAGAAAAGTTGGGGGGAGGCAGAATTGCCCGTATGTTAATACAAGTTCC TAAGATTCCACGAACTGAAGCCCCAGTCTCAAAACGCGATTCTTCTCTAT CTCCGCCTCTTCCCGGTCAGCCATACTTCCAAGAGTGCCAAACCCATGAA GAAGAGGAAACCTTTAACATTGACGTACACTTGACAAAACGACGAAGAAT TATAGGGTCGTGCACGCCTGGACATTCTGAAGCGCAACGCGCATTACATA GTGGGGGTGAAAACGATTTAGTCGCTTCAGATTCACCATTTGTATCTGAT AATCATTATGGAGCATCCCAAAGAACAATCCAGAAACAGACCAATTCAAC AAAGCAGTTGGGAACAGACGTCAACGTTTATTCGGGCAGGTGCTCTGGAG AACCCTCCCATTCCACTCCCCAAACTCGACGTCCAGTACATGACGACGAG GTTGCTTTTCAAGATGAGCTGTTACCCGCAGAAAGCTATAGCACTGCGTT TCGACTGCAGCAGCTGATGTACCCAGATCATAAGCACTCAATGTCGGGAC TCTGGTGCGGAATTCCAGAAAATCCTGTTTGGCGAGTACCATGTTCTGAA CCTTCTTATGTCAACATCACCACGTTTTCTGCTCTCGAATATTTTACGAG AGAGGGCTGCGATAAAACGTTCGATAAAACACAGCGTACTTTCTGA back to top
|