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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005706961.1 |
| Preferred name | ELAC2 |
| PFAMs | Lactamase_B_2,Lactamase_B_4 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K00784 |
| KEGG Pathway | ko03013,map03013 |
| GOs | GO:0000003,GO:0000394,GO:0000959,GO:0000963,GO:0000965,GO:0001558,GO:0002119,GO:0002164,GO:0003006,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006139,GO:0006388,GO:0006396,GO:0006397,GO:0006399,GO:0006417,GO:0006725,GO:0006807,GO:0007049,GO:0007275,GO:0007276,GO:0007281,GO:0008033,GO:0008150,GO:0008152,GO:0008283,GO:0008380,GO:0009295,GO:0009791,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016070,GO:0016071,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019222,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030307,GO:0031123,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031426,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0034248,GO:0034250,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0036093,GO:0040008,GO:0040026,GO:0040028,GO:0042645,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045727,GO:0045927,GO:0046483,GO:0048468,GO:0048518,GO:0048522,GO:0048580,GO:0048582,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051171,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051321,GO:0051704,GO:0060255,GO:0061062,GO:0061063,GO:0065007,GO:0070013,GO:0071704,GO:0072684,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090615,GO:0090646,GO:0140040,GO:0140053,GO:0140098,GO:0140101,GO:1901360,GO:1902375,GO:1905267,GO:1990180,GO:2000026,GO:2000112 |
| Evalue | 3.7e-126 |
| EggNOG OGs | COG1234@1|root,KOG2121@2759|Eukaryota |
| EC | 3.1.26.11 |
| Description | 3'-tRNA processing endoribonuclease activity |
| COG category | C |
| BRITE | ko00000,ko00001,ko01000,ko03016 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil3824.t1 ID=Gchil3824.t1|Name=Gchil3824.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=764bp MHSFVEVIGAGIEDTPSCVQLFFEDSRYLFECGDGSQRLFAEYGVKFGRL KGIYLTSVTAPSVGGLFGFILTVADAGKRQLDITAPQGILGLIEAARGFT YRPTLSLKINEIDIESKPETFPITVAEDANVTIQAVPITSRRDMKIDTGF GAHCDAVTYICRVRDVRGKFNPARALELGVRKGRSFGTLQKGGSVMTEDG RVVTSAEVMSPKTPGPLFVIVSCPSVHHIRSVVSCAALRPNELDLYDDVA GSEQRIKRVCLLVHLAQRDVLYNSEYREWCDSFGKDVGHIPLHSSVSPRG SAFITHNEDLALLHYTLDDELFCLPPNSVDPGSPKTLEDARQLMENKQRE GQSVLSEYSTEIGRGLEKEVYGDRLGKWMVAECKLRYILSPKAVCGPDNT NVRARFVERKSGHPKRRWRETWSPYAGEPVPGGPEGETPGYISRLSCGST AVRFFGTGACLPGKHRNVSSTMIDLFGRGGILLDCGEGTWGQMVRQFGLE RAQRTLCAMRVIFISHMHADHHLGLISLLHERNVAMTKHEELRNGPQLVI VGPPYLEHWLRTFQAAAKVPMLEQVRQAQQCFRFFDAGTLTDPQAPETKI FSDTFGFELGCVAVIHCASSYGVVVKDCVYGWKIVYSGDTRPCEALAEAG KMATLAIHEATLEDGMEVEAKEKRHCTMSEALDVCANRMKAWRTILTHFS QRYPRIPRLDDAMLAKLYHCRATVAFDLMSVDLTRLQDLPRITAAMRDTF PNEVAVEGISTLE* back to topspliced messenger RNA >Gchil3824.t1 ID=Gchil3824.t1|Name=Gchil3824.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2292bp|location=Sequence derived from alignment at tig00000010_pilon:810820..813111+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGCATTCTTTTGTGGAGGTCATTGGCGCTGGAATCGAGGACACACCTTC GTGTGTCCAATTGTTCTTTGAAGATAGCCGCTATCTTTTCGAATGTGGGG ATGGTTCGCAACGCCTATTCGCCGAATACGGCGTAAAGTTTGGACGACTA AAGGGGATATACTTGACTTCTGTCACAGCGCCGTCGGTTGGGGGGTTATT TGGGTTTATACTGACCGTTGCAGATGCCGGAAAGCGACAGCTCGATATCA CTGCGCCTCAGGGCATATTGGGTTTAATTGAAGCTGCAAGAGGCTTTACG TACAGACCCACTCTTAGTTTGAAAATCAACGAGATTGACATCGAGTCCAA ACCAGAAACTTTCCCAATCACTGTCGCGGAAGATGCGAATGTAACCATTC AAGCGGTTCCCATAACGAGTCGTCGGGACATGAAGATTGACACCGGATTT GGAGCTCACTGCGACGCTGTGACATACATTTGTCGCGTACGAGATGTACG AGGAAAGTTTAATCCCGCGCGCGCATTAGAGCTGGGTGTGAGGAAAGGGC GAAGTTTTGGAACGCTGCAAAAGGGTGGCAGCGTTATGACAGAAGACGGC AGGGTGGTCACTTCGGCAGAAGTGATGTCTCCCAAAACCCCGGGTCCGTT GTTTGTTATTGTTTCATGTCCAAGTGTTCACCACATTCGTAGTGTGGTGT CATGTGCCGCACTGCGCCCAAATGAACTTGATCTGTACGACGACGTTGCG GGTTCTGAGCAAAGGATCAAACGCGTTTGTCTGCTTGTTCATCTGGCACA GAGAGACGTTCTCTACAACTCGGAATACCGAGAGTGGTGTGACTCGTTTG GGAAGGACGTTGGGCACATTCCACTACACTCGTCAGTTAGTCCTCGAGGA TCTGCATTCATCACACATAACGAGGACCTTGCGCTGCTGCACTACACGCT AGATGATGAGCTTTTTTGTTTGCCTCCTAATTCTGTAGATCCGGGCTCCC CGAAAACGTTGGAAGATGCCCGACAGCTCATGGAAAACAAACAGAGAGAG GGGCAAAGTGTTCTCAGTGAATATTCGACCGAAATAGGGAGAGGTTTGGA AAAAGAAGTATATGGTGATCGCCTTGGAAAATGGATGGTAGCTGAGTGCA AGCTACGATATATTCTTTCGCCCAAGGCAGTATGTGGGCCAGACAACACA AATGTGCGTGCTCGCTTTGTAGAAAGAAAGAGCGGCCATCCGAAGAGACG GTGGAGGGAAACATGGTCGCCGTATGCAGGGGAACCCGTACCGGGCGGCC CGGAGGGAGAGACGCCGGGCTACATATCACGTCTGAGCTGTGGTTCCACG GCAGTGCGCTTCTTTGGAACCGGAGCATGTTTGCCGGGCAAACACAGGAA TGTGTCGTCAACGATGATCGATTTGTTTGGACGCGGTGGAATCCTGCTTG ATTGCGGCGAGGGCACATGGGGCCAAATGGTGCGTCAGTTTGGATTGGAG CGTGCCCAACGCACCCTATGTGCAATGAGGGTCATCTTCATATCACACAT GCACGCCGATCACCATCTCGGGCTGATAAGTCTGCTACACGAACGAAATG TTGCCATGACCAAACACGAAGAGCTGCGAAACGGGCCGCAGCTGGTAATC GTCGGGCCGCCGTATTTGGAACATTGGTTGAGGACTTTTCAGGCGGCCGC CAAAGTGCCAATGCTGGAGCAGGTGCGCCAAGCGCAACAGTGCTTTCGGT TTTTCGACGCGGGCACTTTGACGGATCCGCAGGCGCCGGAGACGAAGATT TTTTCGGACACGTTTGGTTTTGAGCTGGGCTGCGTGGCCGTCATTCACTG CGCGTCTTCGTACGGCGTGGTGGTGAAGGACTGCGTGTACGGGTGGAAGA TTGTGTACTCCGGAGATACGCGACCGTGTGAGGCACTGGCCGAGGCCGGC AAAATGGCGACGTTGGCGATTCACGAAGCGACGCTGGAGGATGGCATGGA GGTCGAGGCCAAGGAAAAGCGACATTGCACGATGAGTGAAGCGCTGGACG TGTGTGCGAATCGAATGAAAGCGTGGCGAACGATTCTGACGCACTTTTCG CAACGCTATCCGAGAATTCCCAGGCTTGACGATGCGATGCTAGCAAAGTT GTACCATTGTAGAGCGACAGTTGCGTTTGACCTGATGAGCGTGGATCTCA CACGGCTGCAAGATCTGCCGCGGATCACGGCTGCGATGCGCGACACTTTC CCCAACGAAGTGGCGGTGGAAGGGATATCAACGCTAGAGTAA back to topprotein sequence of Gchil3824.t1 >Gchil3824.t1 ID=Gchil3824.t1|Name=Gchil3824.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=764bp
MHSFVEVIGAGIEDTPSCVQLFFEDSRYLFECGDGSQRLFAEYGVKFGRL KGIYLTSVTAPSVGGLFGFILTVADAGKRQLDITAPQGILGLIEAARGFT YRPTLSLKINEIDIESKPETFPITVAEDANVTIQAVPITSRRDMKIDTGF GAHCDAVTYICRVRDVRGKFNPARALELGVRKGRSFGTLQKGGSVMTEDG RVVTSAEVMSPKTPGPLFVIVSCPSVHHIRSVVSCAALRPNELDLYDDVA GSEQRIKRVCLLVHLAQRDVLYNSEYREWCDSFGKDVGHIPLHSSVSPRG SAFITHNEDLALLHYTLDDELFCLPPNSVDPGSPKTLEDARQLMENKQRE GQSVLSEYSTEIGRGLEKEVYGDRLGKWMVAECKLRYILSPKAVCGPDNT NVRARFVERKSGHPKRRWRETWSPYAGEPVPGGPEGETPGYISRLSCGST AVRFFGTGACLPGKHRNVSSTMIDLFGRGGILLDCGEGTWGQMVRQFGLE RAQRTLCAMRVIFISHMHADHHLGLISLLHERNVAMTKHEELRNGPQLVI VGPPYLEHWLRTFQAAAKVPMLEQVRQAQQCFRFFDAGTLTDPQAPETKI FSDTFGFELGCVAVIHCASSYGVVVKDCVYGWKIVYSGDTRPCEALAEAG KMATLAIHEATLEDGMEVEAKEKRHCTMSEALDVCANRMKAWRTILTHFS QRYPRIPRLDDAMLAKLYHCRATVAFDLMSVDLTRLQDLPRITAAMRDTF PNEVAVEGISTLE* back to topmRNA from alignment at tig00000010_pilon:810820..813111+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil3824.t1 ID=Gchil3824.t1|Name=Gchil3824.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2292bp|location=Sequence derived from alignment at tig00000010_pilon:810820..813111+ (Gracilaria chilensis NLEC103_M9 male) ATGCATTCTTTTGTGGAGGTCATTGGCGCTGGAATCGAGGACACACCTTC
GTGTGTCCAATTGTTCTTTGAAGATAGCCGCTATCTTTTCGAATGTGGGG
ATGGTTCGCAACGCCTATTCGCCGAATACGGCGTAAAGTTTGGACGACTA
AAGGGGATATACTTGACTTCTGTCACAGCGCCGTCGGTTGGGGGGTTATT
TGGGTTTATACTGACCGTTGCAGATGCCGGAAAGCGACAGCTCGATATCA
CTGCGCCTCAGGGCATATTGGGTTTAATTGAAGCTGCAAGAGGCTTTACG
TACAGACCCACTCTTAGTTTGAAAATCAACGAGATTGACATCGAGTCCAA
ACCAGAAACTTTCCCAATCACTGTCGCGGAAGATGCGAATGTAACCATTC
AAGCGGTTCCCATAACGAGTCGTCGGGACATGAAGATTGACACCGGATTT
GGAGCTCACTGCGACGCTGTGACATACATTTGTCGCGTACGAGATGTACG
AGGAAAGTTTAATCCCGCGCGCGCATTAGAGCTGGGTGTGAGGAAAGGGC
GAAGTTTTGGAACGCTGCAAAAGGGTGGCAGCGTTATGACAGAAGACGGC
AGGGTGGTCACTTCGGCAGAAGTGATGTCTCCCAAAACCCCGGGTCCGTT
GTTTGTTATTGTTTCATGTCCAAGTGTTCACCACATTCGTAGTGTGGTGT
CATGTGCCGCACTGCGCCCAAATGAACTTGATCTGTACGACGACGTTGCG
GGTTCTGAGCAAAGGATCAAACGCGTTTGTCTGCTTGTTCATCTGGCACA
GAGAGACGTTCTCTACAACTCGGAATACCGAGAGTGGTGTGACTCGTTTG
GGAAGGACGTTGGGCACATTCCACTACACTCGTCAGTTAGTCCTCGAGGA
TCTGCATTCATCACACATAACGAGGACCTTGCGCTGCTGCACTACACGCT
AGATGATGAGCTTTTTTGTTTGCCTCCTAATTCTGTAGATCCGGGCTCCC
CGAAAACGTTGGAAGATGCCCGACAGCTCATGGAAAACAAACAGAGAGAG
GGGCAAAGTGTTCTCAGTGAATATTCGACCGAAATAGGGAGAGGTTTGGA
AAAAGAAGTATATGGTGATCGCCTTGGAAAATGGATGGTAGCTGAGTGCA
AGCTACGATATATTCTTTCGCCCAAGGCAGTATGTGGGCCAGACAACACA
AATGTGCGTGCTCGCTTTGTAGAAAGAAAGAGCGGCCATCCGAAGAGACG
GTGGAGGGAAACATGGTCGCCGTATGCAGGGGAACCCGTACCGGGCGGCC
CGGAGGGAGAGACGCCGGGCTACATATCACGTCTGAGCTGTGGTTCCACG
GCAGTGCGCTTCTTTGGAACCGGAGCATGTTTGCCGGGCAAACACAGGAA
TGTGTCGTCAACGATGATCGATTTGTTTGGACGCGGTGGAATCCTGCTTG
ATTGCGGCGAGGGCACATGGGGCCAAATGGTGCGTCAGTTTGGATTGGAG
CGTGCCCAACGCACCCTATGTGCAATGAGGGTCATCTTCATATCACACAT
GCACGCCGATCACCATCTCGGGCTGATAAGTCTGCTACACGAACGAAATG
TTGCCATGACCAAACACGAAGAGCTGCGAAACGGGCCGCAGCTGGTAATC
GTCGGGCCGCCGTATTTGGAACATTGGTTGAGGACTTTTCAGGCGGCCGC
CAAAGTGCCAATGCTGGAGCAGGTGCGCCAAGCGCAACAGTGCTTTCGGT
TTTTCGACGCGGGCACTTTGACGGATCCGCAGGCGCCGGAGACGAAGATT
TTTTCGGACACGTTTGGTTTTGAGCTGGGCTGCGTGGCCGTCATTCACTG
CGCGTCTTCGTACGGCGTGGTGGTGAAGGACTGCGTGTACGGGTGGAAGA
TTGTGTACTCCGGAGATACGCGACCGTGTGAGGCACTGGCCGAGGCCGGC
AAAATGGCGACGTTGGCGATTCACGAAGCGACGCTGGAGGATGGCATGGA
GGTCGAGGCCAAGGAAAAGCGACATTGCACGATGAGTGAAGCGCTGGACG
TGTGTGCGAATCGAATGAAAGCGTGGCGAACGATTCTGACGCACTTTTCG
CAACGCTATCCGAGAATTCCCAGGCTTGACGATGCGATGCTAGCAAAGTT
GTACCATTGTAGAGCGACAGTTGCGTTTGACCTGATGAGCGTGGATCTCA
CACGGCTGCAAGATCTGCCGCGGATCACGGCTGCGATGCGCGACACTTTC
CCCAACGAAGTGGCGGTGGAAGGGATATCAACGCTAGAGTAA back to topCoding sequence (CDS) from alignment at tig00000010_pilon:810820..813111+ >Gchil3824.t1 ID=Gchil3824.t1|Name=Gchil3824.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2292bp|location=Sequence derived from alignment at tig00000010_pilon:810820..813111+ (Gracilaria chilensis NLEC103_M9 male) ATGCATTCTTTTGTGGAGGTCATTGGCGCTGGAATCGAGGACACACCTTC GTGTGTCCAATTGTTCTTTGAAGATAGCCGCTATCTTTTCGAATGTGGGG ATGGTTCGCAACGCCTATTCGCCGAATACGGCGTAAAGTTTGGACGACTA AAGGGGATATACTTGACTTCTGTCACAGCGCCGTCGGTTGGGGGGTTATT TGGGTTTATACTGACCGTTGCAGATGCCGGAAAGCGACAGCTCGATATCA CTGCGCCTCAGGGCATATTGGGTTTAATTGAAGCTGCAAGAGGCTTTACG TACAGACCCACTCTTAGTTTGAAAATCAACGAGATTGACATCGAGTCCAA ACCAGAAACTTTCCCAATCACTGTCGCGGAAGATGCGAATGTAACCATTC AAGCGGTTCCCATAACGAGTCGTCGGGACATGAAGATTGACACCGGATTT GGAGCTCACTGCGACGCTGTGACATACATTTGTCGCGTACGAGATGTACG AGGAAAGTTTAATCCCGCGCGCGCATTAGAGCTGGGTGTGAGGAAAGGGC GAAGTTTTGGAACGCTGCAAAAGGGTGGCAGCGTTATGACAGAAGACGGC AGGGTGGTCACTTCGGCAGAAGTGATGTCTCCCAAAACCCCGGGTCCGTT GTTTGTTATTGTTTCATGTCCAAGTGTTCACCACATTCGTAGTGTGGTGT CATGTGCCGCACTGCGCCCAAATGAACTTGATCTGTACGACGACGTTGCG GGTTCTGAGCAAAGGATCAAACGCGTTTGTCTGCTTGTTCATCTGGCACA GAGAGACGTTCTCTACAACTCGGAATACCGAGAGTGGTGTGACTCGTTTG GGAAGGACGTTGGGCACATTCCACTACACTCGTCAGTTAGTCCTCGAGGA TCTGCATTCATCACACATAACGAGGACCTTGCGCTGCTGCACTACACGCT AGATGATGAGCTTTTTTGTTTGCCTCCTAATTCTGTAGATCCGGGCTCCC CGAAAACGTTGGAAGATGCCCGACAGCTCATGGAAAACAAACAGAGAGAG GGGCAAAGTGTTCTCAGTGAATATTCGACCGAAATAGGGAGAGGTTTGGA AAAAGAAGTATATGGTGATCGCCTTGGAAAATGGATGGTAGCTGAGTGCA AGCTACGATATATTCTTTCGCCCAAGGCAGTATGTGGGCCAGACAACACA AATGTGCGTGCTCGCTTTGTAGAAAGAAAGAGCGGCCATCCGAAGAGACG GTGGAGGGAAACATGGTCGCCGTATGCAGGGGAACCCGTACCGGGCGGCC CGGAGGGAGAGACGCCGGGCTACATATCACGTCTGAGCTGTGGTTCCACG GCAGTGCGCTTCTTTGGAACCGGAGCATGTTTGCCGGGCAAACACAGGAA TGTGTCGTCAACGATGATCGATTTGTTTGGACGCGGTGGAATCCTGCTTG ATTGCGGCGAGGGCACATGGGGCCAAATGGTGCGTCAGTTTGGATTGGAG CGTGCCCAACGCACCCTATGTGCAATGAGGGTCATCTTCATATCACACAT GCACGCCGATCACCATCTCGGGCTGATAAGTCTGCTACACGAACGAAATG TTGCCATGACCAAACACGAAGAGCTGCGAAACGGGCCGCAGCTGGTAATC GTCGGGCCGCCGTATTTGGAACATTGGTTGAGGACTTTTCAGGCGGCCGC CAAAGTGCCAATGCTGGAGCAGGTGCGCCAAGCGCAACAGTGCTTTCGGT TTTTCGACGCGGGCACTTTGACGGATCCGCAGGCGCCGGAGACGAAGATT TTTTCGGACACGTTTGGTTTTGAGCTGGGCTGCGTGGCCGTCATTCACTG CGCGTCTTCGTACGGCGTGGTGGTGAAGGACTGCGTGTACGGGTGGAAGA TTGTGTACTCCGGAGATACGCGACCGTGTGAGGCACTGGCCGAGGCCGGC AAAATGGCGACGTTGGCGATTCACGAAGCGACGCTGGAGGATGGCATGGA GGTCGAGGCCAAGGAAAAGCGACATTGCACGATGAGTGAAGCGCTGGACG TGTGTGCGAATCGAATGAAAGCGTGGCGAACGATTCTGACGCACTTTTCG CAACGCTATCCGAGAATTCCCAGGCTTGACGATGCGATGCTAGCAAAGTT GTACCATTGTAGAGCGACAGTTGCGTTTGACCTGATGAGCGTGGATCTCA CACGGCTGCAAGATCTGCCGCGGATCACGGCTGCGATGCGCGACACTTTC CCCAACGAAGTGGCGGTGGAAGGGATATCAACGCTAGAGTAA back to top
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