Gchil3655.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil3655.t1
Unique NameGchil3655.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length469
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025222_piloncontigtig00025222_pilon:529578..530984 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3655Gchil3655Gracilaria chilensis NLEC103_M9 malegenetig00025222_pilon 529578..530984 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3655.t1.start1Gchil3655.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00025222_pilon 529578..529580 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3655.t1.CDS1Gchil3655.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00025222_pilon 529578..530984 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3655.t1.exon1Gchil3655.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00025222_pilon 529578..530984 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3655.t1.stop1Gchil3655.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00025222_pilon 530982..530984 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3655.t1Gchil3655.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00025222_pilon 529578..530984 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil3655.t1 ID=Gchil3655.t1|Name=Gchil3655.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=469bp
MSLLTVPEEAVSEVVSHLSRADRASLQLAHPSLARLLRPSNGALWQQVYA
RRFGSRVSQPAPRGPAVTHHARLLCELHDIADDYWIHTELSGAPLRPARA
DADADADADAHAGPLLFDEGSSRRLYVADGRQVAAFCTRSWDAAGARELP
ARARCMHADTRGAAVGLHDGGVFLWAGHGDHDAGRCVRAHKRGVRCVLQL
DDAVVSAADDGTLRARNRHSRRAVAMARARVSAVHSVRDGLLATCGDGAT
APVQLWDAQRLQCVATATLGAAVSHSVLYNGVLYVMAARVIHALDARQGM
SRTAALLTLPRDRAWQQATVGALALGVDGSLAAAVGTGAAALWDARGPWH
GVPFGRPARSTAATTRALLVDRAALVVGGARPRELFTFARCGSHRGVLRE
RGAADARPQAAFTSVARAADALLVGDAGGVVLRARAADASVDWREVRRVW
RSERARRARRFALSDSAL*
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spliced messenger RNA

>Gchil3655.t1 ID=Gchil3655.t1|Name=Gchil3655.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1407bp|location=Sequence derived from alignment at tig00025222_pilon:529578..530984+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGCTGCTGACGGTGCCCGAGGAGGCGGTGAGCGAGGTGGTGAGCCA
TCTGTCCAGGGCGGACCGCGCGTCGCTGCAGCTGGCGCACCCGAGCCTCG
CGCGGCTGCTGCGCCCGTCCAACGGCGCGCTGTGGCAGCAAGTGTACGCG
AGGCGCTTCGGCTCGCGCGTCTCTCAGCCCGCGCCGCGCGGCCCCGCTGT
CACGCACCACGCGCGCCTGCTCTGCGAGCTGCACGATATCGCCGACGACT
ACTGGATCCACACCGAGCTCTCTGGCGCCCCGCTGCGCCCCGCACGcgca
gacgcagacgcagacgcagacgcagacgcacacgcGGGGCCGCTGCTATT
CGACGAGGGATCGTCACGGCGGCTGTACGTGGCGGACGGCCGGCAGGTGG
CGGCGTTCTGCACGCGCTCGTGGGACGCGGCCGGCGCGCGCGAGCTGCCG
GCGCGCGCGCGCTGCATGCACGCCGACACGCGCGGCGCGGCGGTGGGGCT
GCATGACGGCGGCGTGTTCCTGTGGGCCGGCCACGGCGACCACGACGCGG
GGCGCTGTGTACGCGCGCACAAGCGCGGCGTGCGCTGCGTGCTGCAGCTC
GACGACGCGGTGGTGTCGGCCGCGGACGACGGCACGCTACGCGCGCGCAA
TCGACACTCGCGACGCGCGGTGGCCATGGCGCGCGCGCGCGTGAGCGCCG
TGCACTCTGTGCGCGATGGATTGTTGGCGACGTGCGGCGACGGGGCGACG
GCGCCCGTGCAACTGTGGGACGCACAGCGGCTGCAGTGCGTGGCGACGGC
GACGCTCGGCGCAGCCGTGTCGCACAGCGTGCTCTACAACGGCGTGTTGT
ACGTGATGGCGGCGCGCGTCATCCACGCACTCGACGCGCGTCAGGGCATG
TCGCGCACGGCCGCGCTGCTGACGCTGCCGCGCGACCGCGCATGGCAGCA
GGCGACGGTGGGCGCGCTCGCGCTAGGCGTCGACGGCTCCCTTgccgccg
ccgtcggcaccggcgccgccgcACTGTGGGACGCGCGCGGCCCCTGGCAC
GGCGTCCCGTTCGGACGCCCCGCGCGCTCGACAGCCGCTACCACGCGCGC
GCTGCTCGTGGACCGCGCCGCGCTGGTGGTGGGCGGAGCGCGCCCCCGCG
AACTGTTCACCTTCGCGCGCTGCGGCTCGCATCGCGGCGTGCTACGCGAG
CGCGGCGCGGCGGACGCGCGCCCCCAAGCGGCCTTCACGTCGGTGGCGCG
CGCGGCCGACGCGCTGCTCGTCGGCGACGCCGGCGGCGTCGTGCTGCGCG
CGCGCGCCGCCGACGCGTCCGTTGACTGGCGCGAGGTGCGGCGCGTGTGG
CGCTCCGAGCGCGCGCGCCGTGCGCGACGTTTCGCACTGTCGGATAGCGC
GCTGTAA
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protein sequence of Gchil3655.t1

>Gchil3655.t1 ID=Gchil3655.t1|Name=Gchil3655.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=469bp
MSLLTVPEEAVSEVVSHLSRADRASLQLAHPSLARLLRPSNGALWQQVYA
RRFGSRVSQPAPRGPAVTHHARLLCELHDIADDYWIHTELSGAPLRPARA
DADADADADAHAGPLLFDEGSSRRLYVADGRQVAAFCTRSWDAAGARELP
ARARCMHADTRGAAVGLHDGGVFLWAGHGDHDAGRCVRAHKRGVRCVLQL
DDAVVSAADDGTLRARNRHSRRAVAMARARVSAVHSVRDGLLATCGDGAT
APVQLWDAQRLQCVATATLGAAVSHSVLYNGVLYVMAARVIHALDARQGM
SRTAALLTLPRDRAWQQATVGALALGVDGSLAAAVGTGAAALWDARGPWH
GVPFGRPARSTAATTRALLVDRAALVVGGARPRELFTFARCGSHRGVLRE
RGAADARPQAAFTSVARAADALLVGDAGGVVLRARAADASVDWREVRRVW
RSERARRARRFALSDSAL*
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mRNA from alignment at tig00025222_pilon:529578..530984+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil3655.t1 ID=Gchil3655.t1|Name=Gchil3655.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1407bp|location=Sequence derived from alignment at tig00025222_pilon:529578..530984+ (Gracilaria chilensis NLEC103_M9 male)
ATGTCGCTGCTGACGGTGCCCGAGGAGGCGGTGAGCGAGGTGGTGAGCCA
TCTGTCCAGGGCGGACCGCGCGTCGCTGCAGCTGGCGCACCCGAGCCTCG
CGCGGCTGCTGCGCCCGTCCAACGGCGCGCTGTGGCAGCAAGTGTACGCG
AGGCGCTTCGGCTCGCGCGTCTCTCAGCCCGCGCCGCGCGGCCCCGCTGT
CACGCACCACGCGCGCCTGCTCTGCGAGCTGCACGATATCGCCGACGACT
ACTGGATCCACACCGAGCTCTCTGGCGCCCCGCTGCGCCCCGCACGcgca
gacgcagacgcagacgcagacgcagacgcacacgcGGGGCCGCTGCTATT
CGACGAGGGATCGTCACGGCGGCTGTACGTGGCGGACGGCCGGCAGGTGG
CGGCGTTCTGCACGCGCTCGTGGGACGCGGCCGGCGCGCGCGAGCTGCCG
GCGCGCGCGCGCTGCATGCACGCCGACACGCGCGGCGCGGCGGTGGGGCT
GCATGACGGCGGCGTGTTCCTGTGGGCCGGCCACGGCGACCACGACGCGG
GGCGCTGTGTACGCGCGCACAAGCGCGGCGTGCGCTGCGTGCTGCAGCTC
GACGACGCGGTGGTGTCGGCCGCGGACGACGGCACGCTACGCGCGCGCAA
TCGACACTCGCGACGCGCGGTGGCCATGGCGCGCGCGCGCGTGAGCGCCG
TGCACTCTGTGCGCGATGGATTGTTGGCGACGTGCGGCGACGGGGCGACG
GCGCCCGTGCAACTGTGGGACGCACAGCGGCTGCAGTGCGTGGCGACGGC
GACGCTCGGCGCAGCCGTGTCGCACAGCGTGCTCTACAACGGCGTGTTGT
ACGTGATGGCGGCGCGCGTCATCCACGCACTCGACGCGCGTCAGGGCATG
TCGCGCACGGCCGCGCTGCTGACGCTGCCGCGCGACCGCGCATGGCAGCA
GGCGACGGTGGGCGCGCTCGCGCTAGGCGTCGACGGCTCCCTTgccgccg
ccgtcggcaccggcgccgccgcACTGTGGGACGCGCGCGGCCCCTGGCAC
GGCGTCCCGTTCGGACGCCCCGCGCGCTCGACAGCCGCTACCACGCGCGC
GCTGCTCGTGGACCGCGCCGCGCTGGTGGTGGGCGGAGCGCGCCCCCGCG
AACTGTTCACCTTCGCGCGCTGCGGCTCGCATCGCGGCGTGCTACGCGAG
CGCGGCGCGGCGGACGCGCGCCCCCAAGCGGCCTTCACGTCGGTGGCGCG
CGCGGCCGACGCGCTGCTCGTCGGCGACGCCGGCGGCGTCGTGCTGCGCG
CGCGCGCCGCCGACGCGTCCGTTGACTGGCGCGAGGTGCGGCGCGTGTGG
CGCTCCGAGCGCGCGCGCCGTGCGCGACGTTTCGCACTGTCGGATAGCGC
GCTGTAA
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Coding sequence (CDS) from alignment at tig00025222_pilon:529578..530984+

>Gchil3655.t1 ID=Gchil3655.t1|Name=Gchil3655.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1407bp|location=Sequence derived from alignment at tig00025222_pilon:529578..530984+ (Gracilaria chilensis NLEC103_M9 male)
ATGTCGCTGCTGACGGTGCCCGAGGAGGCGGTGAGCGAGGTGGTGAGCCA
TCTGTCCAGGGCGGACCGCGCGTCGCTGCAGCTGGCGCACCCGAGCCTCG
CGCGGCTGCTGCGCCCGTCCAACGGCGCGCTGTGGCAGCAAGTGTACGCG
AGGCGCTTCGGCTCGCGCGTCTCTCAGCCCGCGCCGCGCGGCCCCGCTGT
CACGCACCACGCGCGCCTGCTCTGCGAGCTGCACGATATCGCCGACGACT
ACTGGATCCACACCGAGCTCTCTGGCGCCCCGCTGCGCCCCGCACGcgca
gacgcagacgcagacgcagacgcagacgcacacgcGGGGCCGCTGCTATT
CGACGAGGGATCGTCACGGCGGCTGTACGTGGCGGACGGCCGGCAGGTGG
CGGCGTTCTGCACGCGCTCGTGGGACGCGGCCGGCGCGCGCGAGCTGCCG
GCGCGCGCGCGCTGCATGCACGCCGACACGCGCGGCGCGGCGGTGGGGCT
GCATGACGGCGGCGTGTTCCTGTGGGCCGGCCACGGCGACCACGACGCGG
GGCGCTGTGTACGCGCGCACAAGCGCGGCGTGCGCTGCGTGCTGCAGCTC
GACGACGCGGTGGTGTCGGCCGCGGACGACGGCACGCTACGCGCGCGCAA
TCGACACTCGCGACGCGCGGTGGCCATGGCGCGCGCGCGCGTGAGCGCCG
TGCACTCTGTGCGCGATGGATTGTTGGCGACGTGCGGCGACGGGGCGACG
GCGCCCGTGCAACTGTGGGACGCACAGCGGCTGCAGTGCGTGGCGACGGC
GACGCTCGGCGCAGCCGTGTCGCACAGCGTGCTCTACAACGGCGTGTTGT
ACGTGATGGCGGCGCGCGTCATCCACGCACTCGACGCGCGTCAGGGCATG
TCGCGCACGGCCGCGCTGCTGACGCTGCCGCGCGACCGCGCATGGCAGCA
GGCGACGGTGGGCGCGCTCGCGCTAGGCGTCGACGGCTCCCTTgccgccg
ccgtcggcaccggcgccgccgcACTGTGGGACGCGCGCGGCCCCTGGCAC
GGCGTCCCGTTCGGACGCCCCGCGCGCTCGACAGCCGCTACCACGCGCGC
GCTGCTCGTGGACCGCGCCGCGCTGGTGGTGGGCGGAGCGCGCCCCCGCG
AACTGTTCACCTTCGCGCGCTGCGGCTCGCATCGCGGCGTGCTACGCGAG
CGCGGCGCGGCGGACGCGCGCCCCCAAGCGGCCTTCACGTCGGTGGCGCG
CGCGGCCGACGCGCTGCTCGTCGGCGACGCCGGCGGCGTCGTGCTGCGCG
CGCGCGCCGCCGACGCGTCCGTTGACTGGCGCGAGGTGCGGCGCGTGTGG
CGCTCCGAGCGCGCGCGCCGTGCGCGACGTTTCGCACTGTCGGATAGCGC
GCTGTAA
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