Gchil3521.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil3521.t1
Unique NameGchil3521.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length517
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004378_piloncontigtig00004378_pilon:891151..892701 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3521Gchil3521Gracilaria chilensis NLEC103_M9 malegenetig00004378_pilon 891151..892701 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3521.t1.stop1Gchil3521.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004378_pilon 891151..891153 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3521.t1.CDS1Gchil3521.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004378_pilon 891151..892701 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3521.t1.exon1Gchil3521.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004378_pilon 891151..892701 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3521.t1.start1Gchil3521.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004378_pilon 892699..892701 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3521.t1Gchil3521.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004378_pilon 891151..892701 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil3521.t1 ID=Gchil3521.t1|Name=Gchil3521.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=517bp
MPETKYLEKSSPQPVLSFHPTSLVQPNFVRNQIKWWCLVTGCIALITLVP
GYFLAREVQNWIEIFDSFVITFGVRTLALLSKLIIEKLFKFLNEGKLVYV
ISGGNFFTNDNPLIQYLWERRIRNAGRARKVRDRAHQLASHKQAWLVLIV
LSYIARLAPDMLGASLVAQNDPFRIVEPIENVVAPDLGFGYTSGLQFRGN
CVWARVGSTGTLVVGARERRKMDKRFGYIIWQYCVDLFRGDEIEMKYRTL
KGKDQNGEEVQAVFHIEVITEDIFTEEWEPFSNMSHAQKVFKTVLSSTNE
CPNEFCIKNYRTEDMRIVYGLLQKVGMHERELNGDDESLEKLRVSTGRII
ARLPQTTRTSFLVLIVAVNVVVLAQSASNAEEEVEHIALFRAIGELMNIP
GASHFTAIALPRANMARRWMKCPRESCFVVGRDSCSSGELLEKFPEACAV
HDEEGHIVSYTKHGMRYVKAFIDSDVYQWGRSVEKNEDDDQLESSESLEC
ERDREISTLRATQSER*
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spliced messenger RNA

>Gchil3521.t1 ID=Gchil3521.t1|Name=Gchil3521.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1551bp|location=Sequence derived from alignment at tig00004378_pilon:891151..892701- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCAGAGACAAAATACTTGGAAAAGTCATCACCGCAACCAGTGCTGAG
TTTTCATCCCACATCTCTTGTTCAACCAAATTTCGTTCGCAATCAGATCA
AGTGGTGGTGTCTCGTAACCGGGTGCATTGCGTTAATAACTTTAGTGCCC
GGTTACTTTCTTGCGCGAGAGGTTCAGAACTGGATTGAAATATTCGACAG
TTTCGTTATCACATTTGGCGTAAGAACACTTGCTCTGCTGTCTAAACTCA
TTATTGAGAAGCTTTTTAAGTTTCTAAACGAGGGAAAATTGGTGTACGTA
ATTTCTGGGGGAAATTTCTTTACAAACGACAATCCACTCATCCAATATCT
GTGGGAGAGAAGAATTCGAAATGCGGGGCGCGCAAGAAAAGTTCGAGACC
GCGCTCATCAGTTGGCATCTCACAAGCAAGCATGGTTAGTTCTTATTGTG
CTTTCATACATCGCAAGACTCGCACCAGACATGCTGGGAGCTTCACTGGT
GGCGCAAAATGATCCTTTTAGAATAGTGGAACCAATCGAAAACGTTGTCG
CACCGGATTTAGGATTTGGTTACACATCTGGGCTACAATTTCGAGGGAAC
TGCGTCTGGGCACGAGTCGGGTCTACGGGAACTCTCGTGGTCGGGGCTCG
TGAGCGTCGTAAAATGGATAAGCGCTTTGGATATATTATATGGCAATATT
GTGTCGATCTATTTCGGGGCGACGAAATTGAAATGAAGTACCGAACTCTG
AAAGGGAAAGATCAGAACGGAGAGGAAGTACAGGCAGTTTTTCACATTGA
AGTCATCACTGAGGACATATTTACTGAAGAATGGGAACCGTTTTCTAACA
TGAGTCATGCACAAAAAGTATTCAAAACTGTATTGTCCAGTACAAACGAA
TGTCCAAATGAGTTTTGTATTAAGAATTATCGTACAGAAGATATGAGAAT
TGTATATGGTCTCCTGCAAAAAGTTGGAATGCACGAAAGAGAGCTGAATG
GAGATGATGAAAGTCTTGAAAAGTTGAGAGTGAGCACTGGAAGGATTATA
GCACGGCTCCCGCAGACCACAAGGACTTCTTTTCTAGTTTTAATAGTTGC
GGTTAATGTCGTTGTCTTGGCTCAATCTGCAAGCAATGCAGAGGAAGAAG
TTGAACATATTGCTTTGTTCAGGGCAATTGGAGAACTTATGAATATACCT
GGAGCAAGTCATTTCACGGCTATTGCACTACCGCGCGCTAATATGGCTAG
AAGATGGATGAAATGCCCCAGAGAAAGCTGTTTTGTGGTGGGGAGGGACT
CCTGTTCGTCTGGAGAACTACTTGAAAAGTTTCCTGAAGCGTGCGCAGTA
CACGATGAGGAAGGCCATATCGTGTCGTACACAAAACATGGAATGAGATA
TGTGAAAGCTTTCATTGATTCTGATGTGTATCAATGGGGCAGATCTGTCG
AGAAAAATGAAGATGATGACCAATTGGAAAGCTCAGAAAGCTTGGAATGT
GAAAGGGACAGAGAAATATCTACGCTGCGCGCAACTCAGAGCGAACGATG
A
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protein sequence of Gchil3521.t1

>Gchil3521.t1 ID=Gchil3521.t1|Name=Gchil3521.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=517bp
MPETKYLEKSSPQPVLSFHPTSLVQPNFVRNQIKWWCLVTGCIALITLVP
GYFLAREVQNWIEIFDSFVITFGVRTLALLSKLIIEKLFKFLNEGKLVYV
ISGGNFFTNDNPLIQYLWERRIRNAGRARKVRDRAHQLASHKQAWLVLIV
LSYIARLAPDMLGASLVAQNDPFRIVEPIENVVAPDLGFGYTSGLQFRGN
CVWARVGSTGTLVVGARERRKMDKRFGYIIWQYCVDLFRGDEIEMKYRTL
KGKDQNGEEVQAVFHIEVITEDIFTEEWEPFSNMSHAQKVFKTVLSSTNE
CPNEFCIKNYRTEDMRIVYGLLQKVGMHERELNGDDESLEKLRVSTGRII
ARLPQTTRTSFLVLIVAVNVVVLAQSASNAEEEVEHIALFRAIGELMNIP
GASHFTAIALPRANMARRWMKCPRESCFVVGRDSCSSGELLEKFPEACAV
HDEEGHIVSYTKHGMRYVKAFIDSDVYQWGRSVEKNEDDDQLESSESLEC
ERDREISTLRATQSER*
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mRNA from alignment at tig00004378_pilon:891151..892701-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil3521.t1 ID=Gchil3521.t1|Name=Gchil3521.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1551bp|location=Sequence derived from alignment at tig00004378_pilon:891151..892701- (Gracilaria chilensis NLEC103_M9 male)
ATGCCAGAGACAAAATACTTGGAAAAGTCATCACCGCAACCAGTGCTGAG
TTTTCATCCCACATCTCTTGTTCAACCAAATTTCGTTCGCAATCAGATCA
AGTGGTGGTGTCTCGTAACCGGGTGCATTGCGTTAATAACTTTAGTGCCC
GGTTACTTTCTTGCGCGAGAGGTTCAGAACTGGATTGAAATATTCGACAG
TTTCGTTATCACATTTGGCGTAAGAACACTTGCTCTGCTGTCTAAACTCA
TTATTGAGAAGCTTTTTAAGTTTCTAAACGAGGGAAAATTGGTGTACGTA
ATTTCTGGGGGAAATTTCTTTACAAACGACAATCCACTCATCCAATATCT
GTGGGAGAGAAGAATTCGAAATGCGGGGCGCGCAAGAAAAGTTCGAGACC
GCGCTCATCAGTTGGCATCTCACAAGCAAGCATGGTTAGTTCTTATTGTG
CTTTCATACATCGCAAGACTCGCACCAGACATGCTGGGAGCTTCACTGGT
GGCGCAAAATGATCCTTTTAGAATAGTGGAACCAATCGAAAACGTTGTCG
CACCGGATTTAGGATTTGGTTACACATCTGGGCTACAATTTCGAGGGAAC
TGCGTCTGGGCACGAGTCGGGTCTACGGGAACTCTCGTGGTCGGGGCTCG
TGAGCGTCGTAAAATGGATAAGCGCTTTGGATATATTATATGGCAATATT
GTGTCGATCTATTTCGGGGCGACGAAATTGAAATGAAGTACCGAACTCTG
AAAGGGAAAGATCAGAACGGAGAGGAAGTACAGGCAGTTTTTCACATTGA
AGTCATCACTGAGGACATATTTACTGAAGAATGGGAACCGTTTTCTAACA
TGAGTCATGCACAAAAAGTATTCAAAACTGTATTGTCCAGTACAAACGAA
TGTCCAAATGAGTTTTGTATTAAGAATTATCGTACAGAAGATATGAGAAT
TGTATATGGTCTCCTGCAAAAAGTTGGAATGCACGAAAGAGAGCTGAATG
GAGATGATGAAAGTCTTGAAAAGTTGAGAGTGAGCACTGGAAGGATTATA
GCACGGCTCCCGCAGACCACAAGGACTTCTTTTCTAGTTTTAATAGTTGC
GGTTAATGTCGTTGTCTTGGCTCAATCTGCAAGCAATGCAGAGGAAGAAG
TTGAACATATTGCTTTGTTCAGGGCAATTGGAGAACTTATGAATATACCT
GGAGCAAGTCATTTCACGGCTATTGCACTACCGCGCGCTAATATGGCTAG
AAGATGGATGAAATGCCCCAGAGAAAGCTGTTTTGTGGTGGGGAGGGACT
CCTGTTCGTCTGGAGAACTACTTGAAAAGTTTCCTGAAGCGTGCGCAGTA
CACGATGAGGAAGGCCATATCGTGTCGTACACAAAACATGGAATGAGATA
TGTGAAAGCTTTCATTGATTCTGATGTGTATCAATGGGGCAGATCTGTCG
AGAAAAATGAAGATGATGACCAATTGGAAAGCTCAGAAAGCTTGGAATGT
GAAAGGGACAGAGAAATATCTACGCTGCGCGCAACTCAGAGCGAACGATG
A
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Coding sequence (CDS) from alignment at tig00004378_pilon:891151..892701-

>Gchil3521.t1 ID=Gchil3521.t1|Name=Gchil3521.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1551bp|location=Sequence derived from alignment at tig00004378_pilon:891151..892701- (Gracilaria chilensis NLEC103_M9 male)
ATGCCAGAGACAAAATACTTGGAAAAGTCATCACCGCAACCAGTGCTGAG
TTTTCATCCCACATCTCTTGTTCAACCAAATTTCGTTCGCAATCAGATCA
AGTGGTGGTGTCTCGTAACCGGGTGCATTGCGTTAATAACTTTAGTGCCC
GGTTACTTTCTTGCGCGAGAGGTTCAGAACTGGATTGAAATATTCGACAG
TTTCGTTATCACATTTGGCGTAAGAACACTTGCTCTGCTGTCTAAACTCA
TTATTGAGAAGCTTTTTAAGTTTCTAAACGAGGGAAAATTGGTGTACGTA
ATTTCTGGGGGAAATTTCTTTACAAACGACAATCCACTCATCCAATATCT
GTGGGAGAGAAGAATTCGAAATGCGGGGCGCGCAAGAAAAGTTCGAGACC
GCGCTCATCAGTTGGCATCTCACAAGCAAGCATGGTTAGTTCTTATTGTG
CTTTCATACATCGCAAGACTCGCACCAGACATGCTGGGAGCTTCACTGGT
GGCGCAAAATGATCCTTTTAGAATAGTGGAACCAATCGAAAACGTTGTCG
CACCGGATTTAGGATTTGGTTACACATCTGGGCTACAATTTCGAGGGAAC
TGCGTCTGGGCACGAGTCGGGTCTACGGGAACTCTCGTGGTCGGGGCTCG
TGAGCGTCGTAAAATGGATAAGCGCTTTGGATATATTATATGGCAATATT
GTGTCGATCTATTTCGGGGCGACGAAATTGAAATGAAGTACCGAACTCTG
AAAGGGAAAGATCAGAACGGAGAGGAAGTACAGGCAGTTTTTCACATTGA
AGTCATCACTGAGGACATATTTACTGAAGAATGGGAACCGTTTTCTAACA
TGAGTCATGCACAAAAAGTATTCAAAACTGTATTGTCCAGTACAAACGAA
TGTCCAAATGAGTTTTGTATTAAGAATTATCGTACAGAAGATATGAGAAT
TGTATATGGTCTCCTGCAAAAAGTTGGAATGCACGAAAGAGAGCTGAATG
GAGATGATGAAAGTCTTGAAAAGTTGAGAGTGAGCACTGGAAGGATTATA
GCACGGCTCCCGCAGACCACAAGGACTTCTTTTCTAGTTTTAATAGTTGC
GGTTAATGTCGTTGTCTTGGCTCAATCTGCAAGCAATGCAGAGGAAGAAG
TTGAACATATTGCTTTGTTCAGGGCAATTGGAGAACTTATGAATATACCT
GGAGCAAGTCATTTCACGGCTATTGCACTACCGCGCGCTAATATGGCTAG
AAGATGGATGAAATGCCCCAGAGAAAGCTGTTTTGTGGTGGGGAGGGACT
CCTGTTCGTCTGGAGAACTACTTGAAAAGTTTCCTGAAGCGTGCGCAGTA
CACGATGAGGAAGGCCATATCGTGTCGTACACAAAACATGGAATGAGATA
TGTGAAAGCTTTCATTGATTCTGATGTGTATCAATGGGGCAGATCTGTCG
AGAAAAATGAAGATGATGACCAATTGGAAAGCTCAGAAAGCTTGGAATGT
GAAAGGGACAGAGAAATATCTACGCTGCGCGCAACTCAGAGCGAACGATG
A
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