Gchil3475.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil3475.t1
Unique NameGchil3475.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length483
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004378_piloncontigtig00004378_pilon:416797..418245 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog157072.XP_008880483.1
Preferred nameMBOAT1
PFAMsMBOAT
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00037,RC00039
KEGG koko:K13146,ko:K13517,ko:K13519
KEGG ReactionR01318,R02241,R03437,R04480,R09034,R09035,R09036,R09381
KEGG Pathwayko00561,ko00564,ko00565,ko01100,ko01110,map00561,map00564,map00565,map01100,map01110
KEGG ModuleM00089
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0003841,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006575,GO:0006629,GO:0006644,GO:0006646,GO:0006650,GO:0006658,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0007009,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0008150,GO:0008152,GO:0008354,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009653,GO:0009987,GO:0010256,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016411,GO:0016477,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030258,GO:0031224,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0036150,GO:0036151,GO:0036152,GO:0040011,GO:0042171,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045017,GO:0046337,GO:0046470,GO:0046474,GO:0046486,GO:0047144,GO:0047184,GO:0048232,GO:0048468,GO:0048515,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0048870,GO:0051179,GO:0051674,GO:0051704,GO:0061024,GO:0071617,GO:0071704,GO:0071840,GO:0090407,GO:0097164,GO:0098827,GO:1901564,GO:1901576
Evalue1.4e-73
EggNOG OGsCOG5202@1|root,KOG2704@2759|Eukaryota
EC2.3.1.23,2.3.1.51
Descriptionprotein octanoylation
COG categoryU
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko03041
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3475Gchil3475Gracilaria chilensis NLEC103_M9 malegenetig00004378_pilon 416797..418245 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3475.t1.stop1Gchil3475.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004378_pilon 416797..416799 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3475.t1.CDS1Gchil3475.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004378_pilon 416797..418245 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3475.t1.exon1Gchil3475.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004378_pilon 416797..418245 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3475.t1.start1Gchil3475.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004378_pilon 418243..418245 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3475.t1Gchil3475.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004378_pilon 416797..418245 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil3475.t1 ID=Gchil3475.t1|Name=Gchil3475.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=483bp
MALVASAFASLRDVAIAYDQALTPAPLLKGVHVLADIAAASAAEIRLFLC
LLLAYPVALSWRALPPGPSGLFRHVFSVVVGGWMLQFANGYQAVLNLSSC
LFCYLLMHLLGPRSAKTVSVVAMLILAAGHLYRQATDYLGWTLDWTLVAM
VTTQKIMGLAYNVQDGVDPDATPKQKLRSVSKIPSLLEFLSFILFPANVV
IGPAFEYSDYVAFATGNNVAPPPYLPGLWRLFQGLFFFVSHTAIALKFPC
AAMLSDKNFFKTGTFLSRYAAIEVGLLAVRFKYYFGWKIAEGSACMSGLG
FNGFDKATGTEKWDRVENVNVLQYETSGSLRTSSQNWNKTTNLWLRRYVY
DRAPPSVNLYFTYLVSAFWHGFYPGYYMFFLSVAAATVVHRQVRRTIRPR
FLMADRETPGPLMPLYSTISFLATHATLNYFIISFVLLASNLSIDAFRGL
GFYGHWILLFSLILFNTGLTTPPAKKPASKIQ*
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spliced messenger RNA

>Gchil3475.t1 ID=Gchil3475.t1|Name=Gchil3475.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1449bp|location=Sequence derived from alignment at tig00004378_pilon:416797..418245- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGCTAGTCGCTTCTGCTTTCGCTTCCCTCCGTGATGTCGCCATCGC
CTATGACCAGGCCCTTACGCCGGCGCCCCTGCTCAAGGGCGTCCATGTGC
TCGCCGACATTGCCGCGGCTAGCGCCGCCGAGATTCGCCTCTTCCTCTGT
TTGCTGCTAGCCTACCCCGTCGCTCTGTCGTGGCGTGCACTGCCGCCCGG
CCCATCTGGTCTGTTCCGACATGTGTTCTCGGTCGTCGTCGGCGGCTGGA
TGCTCCAGTTTGCAAACGGCTATCAGGCAGTGCTCAATTTGTCCTCTTGT
CTCTTCTGCTACCTGCTCATGCACTTGCTTGGGCCCCGCAGTGCCAAGAC
CGTCTCTGTTGTTGCCATGCTCATTCTCGCCGCCGGGCACTTGTACAGAC
AGGCCACCGACTACCTCGGCTGGACACTGGATTGGACACTAGTGGCCATG
GTCACTACCCAGAAGATCATGGGTCTGGCGTACAACGTTCAGGACGGTGT
CGATCCCGATGCCACACCTAAACAAAAGTTGCGATCCGTCAGCAAAATTC
CATCACTCTTAGAGTTTTTGAGCTTCATTCTCTTCCCGGCAAACGTCGTC
ATCGGTCCTGCTTTCGAATACTCGGACTATGTTGCCTTTGCGACGGGTAA
TAATGTTGCACCCCCACCGTATTTGCCCGGTCTGTGGAGGCTATTCCAGG
GTCTTTTCTTTTTTGTATCACACACTGCCATTGCACTCAAGTTTCCTTGC
GCAGCAATGCTCAGCGACAAAAACTTTTTTAAAACGGGAACTTTCCTGTC
GCGATATGCCGCTATCGAGGTGGGATTACTTGCCGTGCGATTCAAGTACT
ACTTTGGTTGGAAGATTGCTGAGGGCTCGGCGTGCATGTCGGGCTTGGGC
TTTAACGGTTTTGATAAGGCTACTGGTACAGAGAAGTGGGATCGCGTCGA
GAATGTCAATGTATTGCAGTACGAAACTTCTGGTTCGCTGCGAACTTCTT
CTCAGAATTGGAACAAAACCACCAATTTGTGGTTGCGCCGCTACGTATAC
GACCGTGCTCCACCATCTGTCAATCTTTATTTCACCTACCTGGTCTCCGC
GTTCTGGCACGGCTTTTATCCGGGTTACTACATGTTCTTCCTCTCGGTGG
CCGCTGCAACCGTTGTTCACCGACAAGTGCGACGGACTATCCGCCCGCGT
TTCTTGATGGCGGACCGGGAGACACCAGGACCGCTTATGCCGTTGTACTC
CACGATCTCGTTCTTGGCAACGCATGCCACTCTTAATTACTTCATCATAT
CATTTGTGTTGCTTGCGTCCAACCTTTCTATCGACGCCTTCAGAGGTCTC
GGCTTCTACGGACATTGGATTTTACTCTTCTCGCTTATTTTGTTCAACAC
CGGACTTACCACACCGCCAGCGAAGAAGCCCGCATCGAAGATTCAATAA
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protein sequence of Gchil3475.t1

>Gchil3475.t1 ID=Gchil3475.t1|Name=Gchil3475.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=483bp
MALVASAFASLRDVAIAYDQALTPAPLLKGVHVLADIAAASAAEIRLFLC
LLLAYPVALSWRALPPGPSGLFRHVFSVVVGGWMLQFANGYQAVLNLSSC
LFCYLLMHLLGPRSAKTVSVVAMLILAAGHLYRQATDYLGWTLDWTLVAM
VTTQKIMGLAYNVQDGVDPDATPKQKLRSVSKIPSLLEFLSFILFPANVV
IGPAFEYSDYVAFATGNNVAPPPYLPGLWRLFQGLFFFVSHTAIALKFPC
AAMLSDKNFFKTGTFLSRYAAIEVGLLAVRFKYYFGWKIAEGSACMSGLG
FNGFDKATGTEKWDRVENVNVLQYETSGSLRTSSQNWNKTTNLWLRRYVY
DRAPPSVNLYFTYLVSAFWHGFYPGYYMFFLSVAAATVVHRQVRRTIRPR
FLMADRETPGPLMPLYSTISFLATHATLNYFIISFVLLASNLSIDAFRGL
GFYGHWILLFSLILFNTGLTTPPAKKPASKIQ*
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mRNA from alignment at tig00004378_pilon:416797..418245-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil3475.t1 ID=Gchil3475.t1|Name=Gchil3475.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1449bp|location=Sequence derived from alignment at tig00004378_pilon:416797..418245- (Gracilaria chilensis NLEC103_M9 male)
ATGGCGCTAGTCGCTTCTGCTTTCGCTTCCCTCCGTGATGTCGCCATCGC
CTATGACCAGGCCCTTACGCCGGCGCCCCTGCTCAAGGGCGTCCATGTGC
TCGCCGACATTGCCGCGGCTAGCGCCGCCGAGATTCGCCTCTTCCTCTGT
TTGCTGCTAGCCTACCCCGTCGCTCTGTCGTGGCGTGCACTGCCGCCCGG
CCCATCTGGTCTGTTCCGACATGTGTTCTCGGTCGTCGTCGGCGGCTGGA
TGCTCCAGTTTGCAAACGGCTATCAGGCAGTGCTCAATTTGTCCTCTTGT
CTCTTCTGCTACCTGCTCATGCACTTGCTTGGGCCCCGCAGTGCCAAGAC
CGTCTCTGTTGTTGCCATGCTCATTCTCGCCGCCGGGCACTTGTACAGAC
AGGCCACCGACTACCTCGGCTGGACACTGGATTGGACACTAGTGGCCATG
GTCACTACCCAGAAGATCATGGGTCTGGCGTACAACGTTCAGGACGGTGT
CGATCCCGATGCCACACCTAAACAAAAGTTGCGATCCGTCAGCAAAATTC
CATCACTCTTAGAGTTTTTGAGCTTCATTCTCTTCCCGGCAAACGTCGTC
ATCGGTCCTGCTTTCGAATACTCGGACTATGTTGCCTTTGCGACGGGTAA
TAATGTTGCACCCCCACCGTATTTGCCCGGTCTGTGGAGGCTATTCCAGG
GTCTTTTCTTTTTTGTATCACACACTGCCATTGCACTCAAGTTTCCTTGC
GCAGCAATGCTCAGCGACAAAAACTTTTTTAAAACGGGAACTTTCCTGTC
GCGATATGCCGCTATCGAGGTGGGATTACTTGCCGTGCGATTCAAGTACT
ACTTTGGTTGGAAGATTGCTGAGGGCTCGGCGTGCATGTCGGGCTTGGGC
TTTAACGGTTTTGATAAGGCTACTGGTACAGAGAAGTGGGATCGCGTCGA
GAATGTCAATGTATTGCAGTACGAAACTTCTGGTTCGCTGCGAACTTCTT
CTCAGAATTGGAACAAAACCACCAATTTGTGGTTGCGCCGCTACGTATAC
GACCGTGCTCCACCATCTGTCAATCTTTATTTCACCTACCTGGTCTCCGC
GTTCTGGCACGGCTTTTATCCGGGTTACTACATGTTCTTCCTCTCGGTGG
CCGCTGCAACCGTTGTTCACCGACAAGTGCGACGGACTATCCGCCCGCGT
TTCTTGATGGCGGACCGGGAGACACCAGGACCGCTTATGCCGTTGTACTC
CACGATCTCGTTCTTGGCAACGCATGCCACTCTTAATTACTTCATCATAT
CATTTGTGTTGCTTGCGTCCAACCTTTCTATCGACGCCTTCAGAGGTCTC
GGCTTCTACGGACATTGGATTTTACTCTTCTCGCTTATTTTGTTCAACAC
CGGACTTACCACACCGCCAGCGAAGAAGCCCGCATCGAAGATTCAATAA
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Coding sequence (CDS) from alignment at tig00004378_pilon:416797..418245-

>Gchil3475.t1 ID=Gchil3475.t1|Name=Gchil3475.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1449bp|location=Sequence derived from alignment at tig00004378_pilon:416797..418245- (Gracilaria chilensis NLEC103_M9 male)
ATGGCGCTAGTCGCTTCTGCTTTCGCTTCCCTCCGTGATGTCGCCATCGC
CTATGACCAGGCCCTTACGCCGGCGCCCCTGCTCAAGGGCGTCCATGTGC
TCGCCGACATTGCCGCGGCTAGCGCCGCCGAGATTCGCCTCTTCCTCTGT
TTGCTGCTAGCCTACCCCGTCGCTCTGTCGTGGCGTGCACTGCCGCCCGG
CCCATCTGGTCTGTTCCGACATGTGTTCTCGGTCGTCGTCGGCGGCTGGA
TGCTCCAGTTTGCAAACGGCTATCAGGCAGTGCTCAATTTGTCCTCTTGT
CTCTTCTGCTACCTGCTCATGCACTTGCTTGGGCCCCGCAGTGCCAAGAC
CGTCTCTGTTGTTGCCATGCTCATTCTCGCCGCCGGGCACTTGTACAGAC
AGGCCACCGACTACCTCGGCTGGACACTGGATTGGACACTAGTGGCCATG
GTCACTACCCAGAAGATCATGGGTCTGGCGTACAACGTTCAGGACGGTGT
CGATCCCGATGCCACACCTAAACAAAAGTTGCGATCCGTCAGCAAAATTC
CATCACTCTTAGAGTTTTTGAGCTTCATTCTCTTCCCGGCAAACGTCGTC
ATCGGTCCTGCTTTCGAATACTCGGACTATGTTGCCTTTGCGACGGGTAA
TAATGTTGCACCCCCACCGTATTTGCCCGGTCTGTGGAGGCTATTCCAGG
GTCTTTTCTTTTTTGTATCACACACTGCCATTGCACTCAAGTTTCCTTGC
GCAGCAATGCTCAGCGACAAAAACTTTTTTAAAACGGGAACTTTCCTGTC
GCGATATGCCGCTATCGAGGTGGGATTACTTGCCGTGCGATTCAAGTACT
ACTTTGGTTGGAAGATTGCTGAGGGCTCGGCGTGCATGTCGGGCTTGGGC
TTTAACGGTTTTGATAAGGCTACTGGTACAGAGAAGTGGGATCGCGTCGA
GAATGTCAATGTATTGCAGTACGAAACTTCTGGTTCGCTGCGAACTTCTT
CTCAGAATTGGAACAAAACCACCAATTTGTGGTTGCGCCGCTACGTATAC
GACCGTGCTCCACCATCTGTCAATCTTTATTTCACCTACCTGGTCTCCGC
GTTCTGGCACGGCTTTTATCCGGGTTACTACATGTTCTTCCTCTCGGTGG
CCGCTGCAACCGTTGTTCACCGACAAGTGCGACGGACTATCCGCCCGCGT
TTCTTGATGGCGGACCGGGAGACACCAGGACCGCTTATGCCGTTGTACTC
CACGATCTCGTTCTTGGCAACGCATGCCACTCTTAATTACTTCATCATAT
CATTTGTGTTGCTTGCGTCCAACCTTTCTATCGACGCCTTCAGAGGTCTC
GGCTTCTACGGACATTGGATTTTACTCTTCTCGCTTATTTTGTTCAACAC
CGGACTTACCACACCGCCAGCGAAGAAGCCCGCATCGAAGATTCAATAA
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