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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 1173022.Cri9333_4308 |
| PFAMs | GDE_C,GDE_N |
| Max annot lvl | 1117|Cyanobacteria |
| Evalue | 4.51e-204 |
| EggNOG OGs | COG3408@1|root,COG3408@2|Bacteria,1G2AS@1117|Cyanobacteria,1H7MX@1150|Oscillatoriales |
| Description | Glycogen debranching enzyme |
| COG category | G |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil3463.t1 ID=Gchil3463.t1|Name=Gchil3463.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=800bp MGASTPQRRCLTAVNEYSSAMLHCELPTDVVYVGREVCGELPMAEAREML VTNGIGGYGSMTIAGSLSRSYHGLLIAALRPPLDRTLLLSKLCETVSYRG TDYYLSTDRRKKNALKRYTVMTRSRHEQSRISPNDGSVSRIGAGIERSSS VPPIWRNDGVSTTLSKLHEDEVVTPAGFELTDSFRLEGTVPVFSYSLGDA VLEKRIWMKHGQNTVYVTYYLRRATEAIELRMQALVNHRNHHDRTSGLSP SFNYSANVGRNGSTVSVLFTTREHHETTLTMMVSRGTADLTNEWMRGFVL SEERMRGLPHIDDNLHAATFIVELPPGGVATFVATAESNASQLSLDGETE LAMQHAYERSLLQKFEDARHDAFQRRMEIEDRISGSESSPYSDSSRSGYG KRRRRRRSVEPNIKQLVLAADQFIISRGGGRSVVAGFHWFTDWARDTMIS LPGLTIATGRYDVARSILQTFSKYVSLGMLPNRFPDDGSAPTETDYDNAD GTLWYFEAIRAYYMASGDLELLLELFPILQDIVRHHCNGTRFGIIQDEDG LLRAGCAGLALTWMDAKTDIVYTQRDGKAVELAALWYNALNSMAFFASEL EKEDDCDTFTGMADLTEQSFQEKFWNGERGYCYDVIEGGESGTKTDSSLR PNQLIAASLNWSPLTEEQRFMVLDACSKHLVTTHAVRTLSPQEQKYQGVY IGDIFARDNAYHQGIGWAWLLGPYVLSHLRVFGNRELARELLLPILRSHL SDAGVGQVSELFDGDAPHRARGCIAQAWSVAEILRAWMATETDDLLEDE* back to topspliced messenger RNA >Gchil3463.t1 ID=Gchil3463.t1|Name=Gchil3463.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2400bp|location=Sequence derived from alignment at tig00004378_pilon:258155..260898+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGGTGCATCAACTCCACAGAGACGTTGTCTGACTGCCGTCAATGAATA CTCTTCTGCAATGCTTCACTGCGAGTTACCCACAGATGTTGTTTATGTTG GCCGCGAGGTCTGCGGCGAATTGCCGATGGCGGAGGCGCGGGAGATGCTT GTCACGAACGGAATTGGAGGCTATGGTTCAATGACGATAGCAGGGTCCCT GAGTCGATCATATCACGGACTACTGATAGCGGCACTTCGGCCACCTCTGG ATCGAACGCTCTTGCTATCTAAATTATGCGAGACGGTCTCTTACCGTGGC ACAGATTATTACCTCTCTACTGATCGACGCAAGAAGAACGCACTGAAGCG ATACACTGTAATGACTCGATCCCGCCACGAGCAAAGCAGAATTTCGCCAA ATGATGGTAGTGTATCGCGAATCGGGGCAGGTATCGAGCGTTCTTCTTCA GTACCACCTATCTGGCGAAATGATGGCGTATCCACCACCCTATCAAAACT TCACGAGGATGAAGTTGTGACTCCTGCAGGATTCGAGCTGACGGACTCTT TTCGTCTTGAAGGTACCGTGCCAGTTTTTTCGTATAGTCTTGGCGATGCC GTTCTCGAGAAGCGCATATGGATGAAGCATGGTCAAAACACTGTGTACGT GACGTACTATCTTCGTCGCGCAACTGAAGCGATTGAGCTCCGGATGCAGG CTTTGGTAAATCACCGGAATCACCATGACAGAACATCTGGTTTGAGTCCC AGTTTCAACTACTCCGCGAACGTCGGCAGAAATGGTTCAACTGTATCTGT TCTGTTCACGACTCGGGAGCACCACGAAACGACGCTTACTATGATGGTCA GTCGAGGCACGGCTGACCTGACAAACGAATGGATGCGCGGGTTCGTCCTC TCTGAGGAGCGCATGCGAGGTCTTCCGCACATTGATGACAATTTGCACGC TGCGACATTTATAGTCGAATTACCACCGGGAGGGGTGGCGACTTTTGTGG CGACAGCAGAGAGTAATGCCTCGCAGCTCAGTTTAGATGGAGAGACAGAA TTGGCGATGCAACACGCTTATGAAAGATCACTGTTACAGAAGTTTGAAGA TGCGCGACATGATGCGTTCCAGAGAAGAATGGAGATTGAGGACAGAATTT CTGGTTCGGAATCATCTCCTTACTCTGATTCTTCTCGTTCTGGATATGGA AAGCGAAGACGAAGGCGAAGAAGCGTTGAACCCAACATCAAACAGCTTGT GCTTGCCGCAGACCAGTTCATCATTTCAAGAGGAGGTGGCAGGTCTGTGG TGGCAGGGTTCCACTGGTTCACAGATTGGGCGAGGGATACGATGATATCG CTACCAGGGTTGACGATTGCAACTGGGCGGTACGACGTTGCGCGCTCGAT TTTACAAACGTTTTCAAAGTATGTGAGCTTGGGTATGTTGCCGAACAGAT TTCCAGACGATGGTTCAGCCCCAACGGAAACCGATTATGACAATGCAGAC GGGACTTTGTGGTACTTCGAGGCAATTCGTGCTTACTATATGGCTTCTGG AGATCTGGAACTGCTTTTGGAGCTTTTCCCTATTCTCCAAGACATTGTGC GTCATCACTGCAATGGAACGAGATTTGGAATAATACAGGATGAAGATGGG CTACTTCGTGCCGGGTGTGCAGGTTTGGCGCTGACGTGGATGGATGCGAA AACTGACATTGTGTACACGCAAAGAGACGGTAAAGCGGTTGAACTAGCGG CGCTTTGGTACAATGCTCTAAACAGTATGGCCTTTTTCGCAAGCGAGCTG GAGAAGGAGGACGATTGCGACACTTTCACCGGCATGGCTGACTTGACCGA ACAGTCGTTTCAGGAAAAGTTTTGGAATGGTGAGCGGGGGTACTGCTACG ATGTTATCGAAGGAGGAGAAAGTGGAACAAAAACAGATAGCTCTCTTCGA CCTAATCAGCTAATTGCGGCGTCTTTGAACTGGAGTCCGTTAACAGAAGA GCAACGATTCATGGTGTTGGACGCGTGTTCGAAGCACTTGGTTACAACGC ACGCGGTGCGAACACTCTCGCCGCAGGAGCAAAAATATCAAGGTGTGTAT ATCGGTGACATCTTTGCGAGAGATAACGCCTACCACCAGGGCATCGGGTG GGCATGGTTGCTGGGACCATACGTACTGTCGCATCTAAGAGTGTTTGGCA ACCGCGAACTGGCTCGGGAGTTGCTGTTGCCGATACTGAGATCGCATCTT AGTGACGCGGGAGTGGGGCAAGTGAGCGAGCTTTTCGACGGCGATGCGCC GCATCGAGCGCGAGGGTGTATCGCACAGGCGTGGTCGGTTGCGGAAATTT TGCGAGCATGGATGGCGACTGAAACAGACGATTTGCTGGAGGACGAATAG back to topprotein sequence of Gchil3463.t1 >Gchil3463.t1 ID=Gchil3463.t1|Name=Gchil3463.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=800bp
MGASTPQRRCLTAVNEYSSAMLHCELPTDVVYVGREVCGELPMAEAREML VTNGIGGYGSMTIAGSLSRSYHGLLIAALRPPLDRTLLLSKLCETVSYRG TDYYLSTDRRKKNALKRYTVMTRSRHEQSRISPNDGSVSRIGAGIERSSS VPPIWRNDGVSTTLSKLHEDEVVTPAGFELTDSFRLEGTVPVFSYSLGDA VLEKRIWMKHGQNTVYVTYYLRRATEAIELRMQALVNHRNHHDRTSGLSP SFNYSANVGRNGSTVSVLFTTREHHETTLTMMVSRGTADLTNEWMRGFVL SEERMRGLPHIDDNLHAATFIVELPPGGVATFVATAESNASQLSLDGETE LAMQHAYERSLLQKFEDARHDAFQRRMEIEDRISGSESSPYSDSSRSGYG KRRRRRRSVEPNIKQLVLAADQFIISRGGGRSVVAGFHWFTDWARDTMIS LPGLTIATGRYDVARSILQTFSKYVSLGMLPNRFPDDGSAPTETDYDNAD GTLWYFEAIRAYYMASGDLELLLELFPILQDIVRHHCNGTRFGIIQDEDG LLRAGCAGLALTWMDAKTDIVYTQRDGKAVELAALWYNALNSMAFFASEL EKEDDCDTFTGMADLTEQSFQEKFWNGERGYCYDVIEGGESGTKTDSSLR PNQLIAASLNWSPLTEEQRFMVLDACSKHLVTTHAVRTLSPQEQKYQGVY IGDIFARDNAYHQGIGWAWLLGPYVLSHLRVFGNRELARELLLPILRSHL SDAGVGQVSELFDGDAPHRARGCIAQAWSVAEILRAWMATETDDLLEDE* back to topmRNA from alignment at tig00004378_pilon:258155..260898+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil3463.t1 ID=Gchil3463.t1|Name=Gchil3463.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2744bp|location=Sequence derived from alignment at tig00004378_pilon:258155..260898+ (Gracilaria chilensis NLEC103_M9 male) ATGGGTGCATCAACTCCACAGAGACGTTGTCTGACTGCCGTCAATGAATA
CTCTTCTGCAATGCTTCACTGCGAGTTACCCACAGATGTTGTTTATGTTG
GCCGCGAGGTCTGCGGCGAATTGCCGATGGCGGAGGCGCGGGAGATGCTT
GTCACGAACGGAATTGGAGGCTATGGTTCAATGACGATAGCAGGGTCCCT
GAGTCGATCATATCACGGACTACTGATAGCGGCACTTCGGCCACCTCTGG
ATCGAACGCTCTTGCTATCTAAATTATGCGAGACGGTCTCTTACCGTGGC
ACAGATTATTACCTCTCTACTGATCGACGCAAGAAGAACGCACTGAAGCG
ATACACTGTAATGACTCGATCCCGCCACGAGCAAAGCAGAATTTCGCCAA
ATGATGGTAGTGTATCGCGAATCGGGGCAGGTATCGAGCGTTCTTCTTCA
GTACCACCTATCTGGCGAAATGATGGCGTATCCACCACCCTATCAAAACT
TCACGAGGATGAAGTTGTGACTCCTGCAGGATTCGAGCTGACGGACTCTT
TTCGTCTTGAAGGTACCGTGCCAGTTTTTTCGTATAGTCTTGGCGATGCC
GTTCTCGAGAAGCGCATATGGATGAAGCATGGTCAAAACACTGTGTACGT
GACGTACTATCTTCGTCGCGCAACTGAAGCGATTGAGCTCCGGATGCAGG
CTTTGGTAAATCACCGGAATCACCATGACAGAACATCTGGTTTGAGTCCC
AGTTTCAACTACTCCGCGAACGTCGGCAGAAATGGTTCAACTGTATCTGT
TCTGTTCACGACTCGGGAGCACCACGAAACGACGCTTACTATGATGGTCA
GTCGAGGCACGGCTGACCTGACAAACGAATGGATGCGCGGGTTCGTCCTC
TCTGAGGAGCGCATGCGAGGTCTTCCGCACATTGATGACAATTTGCACGC
TGCGACATTTATAGTCGAATTACCACCGGGAGGGGTGGCGACTTTTGTGG
CGACAGCAGAGAGTAATGCCTCGCAGCTCAGTTTAGATGGAGAGACAGAA
TTGGCGATGCAACACGCTTATGAAAGATCACTGTTACAGAAGTTTGAAGA
TGCGCGACATGATGCGTTCCAGAGAAGAATGGAGATTGAGGACAGAATTT
CTGGTTCGGAATCATCTCCTTACTCTGATTCTTCTCGTTCTGGATATGGA
AAGCGAAGACGAAGGCGAAGAAGCGTTGAACCCAACATCAAACAGCTTGT
GCTTGCCGCAGACCAGTTCATCATTTCAAGAGGAGGTGGCAGGTCTGTGG
TGGCAGGGTTCCACTGGTTCACAGATTGGGCGAGGGATGTACGTATCTTA
GGCCATGAACATGACTCTTGTTATATGAGCTACCGGTTGGCACGAAGTGT
AGTTTTCTAACGGCCCAACGTGTTTCTATTTTATCACGTCGTGTTTGAAG
ACGATGATATCGCTACCAGGGTTGACGATTGCAACTGGGCGGTACGACGT
TGCGCGCTCGATTTTACAAACGTTTTCAAAGTATGGTAAGTTTAGTTCGA
ACTTTTGAGCATCGCCGCAACCCCCCTCCTGTTCGCGTCAAGCGCTGACG
TTTCATCTCTTAACACGGATGTGCTACATGAAACATTTTTGGTTGCGTCT
GAAAACGAAGTGAGCTTGGGTATGTTGCCGAACAGATTTCCAGACGATGG
TTCAGCCCCAACGGAAACCGATTATGACAATGCAGACGGGACTGTACGTT
GTTTTTCTGTTCCAATTGCACGCAGCACAGATCCACTTGATTCTCTCAAA
AAGATTCTGACAAAAGTCGCCGCCGTTGGGCATGTTATTCTTTTTGACAG
TTGTGGTACTTCGAGGCAATTCGTGCTTACTATATGGCTTCTGGAGATCT
GGAACTGCTTTTGGAGCTTTTCCCTATTCTCCAAGACATTGTGCGTCATC
ACTGCAATGGAACGAGATTTGGAATAATACAGGATGAAGATGGGCTACTT
CGTGCCGGGTGTGCAGGTTTGGCGCTGACGTGGATGGATGCGAAAACTGA
CATTGTGTACACGCAAAGAGACGGTAAAGCGGTTGAACTAGCGGCGCTTT
GGTACAATGCTCTAAACAGTATGGCCTTTTTCGCAAGCGAGCTGGAGAAG
GAGGACGATTGCGACACTTTCACCGGCATGGCTGACTTGACCGAACAGTC
GTTTCAGGAAAAGTTTTGGAATGGTGAGCGGGGGTACTGCTACGATGTTA
TCGAAGGAGGAGAAAGTGGAACAAAAACAGATAGCTCTCTTCGACCTAAT
CAGCTAATTGCGGCGTCTTTGAACTGGAGTCCGTTAACAGAAGAGCAACG
ATTCATGGTGTTGGACGCGTGTTCGAAGCACTTGGTTACAACGCACGCGG
TGCGAACACTCTCGCCGCAGGAGCAAAAATATCAAGGTGTGTATATCGGT
GACATCTTTGCGAGAGATAACGCCTACCACCAGGGCATCGGGTGGGCATG
GTTGCTGGGACCATACGTACTGTCGCATCTAAGAGTGTTTGGCAACCGCG
AACTGGCTCGGGAGTTGCTGTTGCCGATACTGAGATCGCATCTTAGTGAC
GCGGGAGTGGGGCAAGTGAGCGAGCTTTTCGACGGCGATGCGCCGCATCG
AGCGCGAGGGTGTATCGCACAGGCGTGGTCGGTTGCGGAAATTTTGCGAG
CATGGATGGCGACTGAAACAGACGATTTGCTGGAGGACGAATAG back to topCoding sequence (CDS) from alignment at tig00004378_pilon:258155..260898+ >Gchil3463.t1 ID=Gchil3463.t1|Name=Gchil3463.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2400bp|location=Sequence derived from alignment at tig00004378_pilon:258155..260898+ (Gracilaria chilensis NLEC103_M9 male) ATGGGTGCATCAACTCCACAGAGACGTTGTCTGACTGCCGTCAATGAATA CTCTTCTGCAATGCTTCACTGCGAGTTACCCACAGATGTTGTTTATGTTG GCCGCGAGGTCTGCGGCGAATTGCCGATGGCGGAGGCGCGGGAGATGCTT GTCACGAACGGAATTGGAGGCTATGGTTCAATGACGATAGCAGGGTCCCT GAGTCGATCATATCACGGACTACTGATAGCGGCACTTCGGCCACCTCTGG ATCGAACGCTCTTGCTATCTAAATTATGCGAGACGGTCTCTTACCGTGGC ACAGATTATTACCTCTCTACTGATCGACGCAAGAAGAACGCACTGAAGCG ATACACTGTAATGACTCGATCCCGCCACGAGCAAAGCAGAATTTCGCCAA ATGATGGTAGTGTATCGCGAATCGGGGCAGGTATCGAGCGTTCTTCTTCA GTACCACCTATCTGGCGAAATGATGGCGTATCCACCACCCTATCAAAACT TCACGAGGATGAAGTTGTGACTCCTGCAGGATTCGAGCTGACGGACTCTT TTCGTCTTGAAGGTACCGTGCCAGTTTTTTCGTATAGTCTTGGCGATGCC GTTCTCGAGAAGCGCATATGGATGAAGCATGGTCAAAACACTGTGTACGT GACGTACTATCTTCGTCGCGCAACTGAAGCGATTGAGCTCCGGATGCAGG CTTTGGTAAATCACCGGAATCACCATGACAGAACATCTGGTTTGAGTCCC AGTTTCAACTACTCCGCGAACGTCGGCAGAAATGGTTCAACTGTATCTGT TCTGTTCACGACTCGGGAGCACCACGAAACGACGCTTACTATGATGGTCA GTCGAGGCACGGCTGACCTGACAAACGAATGGATGCGCGGGTTCGTCCTC TCTGAGGAGCGCATGCGAGGTCTTCCGCACATTGATGACAATTTGCACGC TGCGACATTTATAGTCGAATTACCACCGGGAGGGGTGGCGACTTTTGTGG CGACAGCAGAGAGTAATGCCTCGCAGCTCAGTTTAGATGGAGAGACAGAA TTGGCGATGCAACACGCTTATGAAAGATCACTGTTACAGAAGTTTGAAGA TGCGCGACATGATGCGTTCCAGAGAAGAATGGAGATTGAGGACAGAATTT CTGGTTCGGAATCATCTCCTTACTCTGATTCTTCTCGTTCTGGATATGGA AAGCGAAGACGAAGGCGAAGAAGCGTTGAACCCAACATCAAACAGCTTGT GCTTGCCGCAGACCAGTTCATCATTTCAAGAGGAGGTGGCAGGTCTGTGG TGGCAGGGTTCCACTGGTTCACAGATTGGGCGAGGGATACGATGATATCG CTACCAGGGTTGACGATTGCAACTGGGCGGTACGACGTTGCGCGCTCGAT TTTACAAACGTTTTCAAAGTATGTGAGCTTGGGTATGTTGCCGAACAGAT TTCCAGACGATGGTTCAGCCCCAACGGAAACCGATTATGACAATGCAGAC GGGACTTTGTGGTACTTCGAGGCAATTCGTGCTTACTATATGGCTTCTGG AGATCTGGAACTGCTTTTGGAGCTTTTCCCTATTCTCCAAGACATTGTGC GTCATCACTGCAATGGAACGAGATTTGGAATAATACAGGATGAAGATGGG CTACTTCGTGCCGGGTGTGCAGGTTTGGCGCTGACGTGGATGGATGCGAA AACTGACATTGTGTACACGCAAAGAGACGGTAAAGCGGTTGAACTAGCGG CGCTTTGGTACAATGCTCTAAACAGTATGGCCTTTTTCGCAAGCGAGCTG GAGAAGGAGGACGATTGCGACACTTTCACCGGCATGGCTGACTTGACCGA ACAGTCGTTTCAGGAAAAGTTTTGGAATGGTGAGCGGGGGTACTGCTACG ATGTTATCGAAGGAGGAGAAAGTGGAACAAAAACAGATAGCTCTCTTCGA CCTAATCAGCTAATTGCGGCGTCTTTGAACTGGAGTCCGTTAACAGAAGA GCAACGATTCATGGTGTTGGACGCGTGTTCGAAGCACTTGGTTACAACGC ACGCGGTGCGAACACTCTCGCCGCAGGAGCAAAAATATCAAGGTGTGTAT ATCGGTGACATCTTTGCGAGAGATAACGCCTACCACCAGGGCATCGGGTG GGCATGGTTGCTGGGACCATACGTACTGTCGCATCTAAGAGTGTTTGGCA ACCGCGAACTGGCTCGGGAGTTGCTGTTGCCGATACTGAGATCGCATCTT AGTGACGCGGGAGTGGGGCAAGTGAGCGAGCTTTTCGACGGCGATGCGCC GCATCGAGCGCGAGGGTGTATCGCACAGGCGTGGTCGGTTGCGGAAATTT TGCGAGCATGGATGGCGACTGAAACAGACGATTTGCTGGAGGACGAATAG back to top
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