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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 78898.MVEG_04007T0 |
| PFAMs | ArgoL1,ArgoL2,ArgoMid,ArgoN,PAZ,Piwi |
| Max annot lvl | 4751|Fungi |
| Evalue | 5.39e-119 |
| EggNOG OGs | KOG1041@1|root,KOG1041@2759|Eukaryota,38CFV@33154|Opisthokonta,3NU0D@4751|Fungi,1GSVJ@112252|Fungi incertae sedis |
| Description | Mortierella verticillata NRRL 6337 |
| COG category | J |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil3327.t1 ID=Gchil3327.t1|Name=Gchil3327.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=921bp MSYGPPRGGFTPRGDPRSAQPSAPVTRPTQAEVLRDLRDIGASTRDGRFG KAGRPVDVKVNCFPVDISALTQFITHYDLVFEEIEDESSSGGRGGRGGRG RGRGRGRGRGRGDRGAAQPERLLPIGIATKLVRSIERDYAFDFGSSKIAH DGRKNAYTAFHPNWEGGRKEFRAEWEGKQYKILFKIANQVNMGELSEFIN KNVTVVPQEAITVLDIALRTCPLREWVYTGKTFAVQPPSADIQNRIGSGC EAWVCYYQCFRPKDNGMFLSFDVNYSAFYTSQTVYDYAIEILSSETPLQT PLNRQKTAQLENELRGVKVEQLYLQESERKPHVVRRLTQQPASDLEFEGQ TARVSVAQHFSSIGRTLDHPDMPCIDISAGKSHTYIPLELARIVPGQRRR AMLSREMKERMAHMAAQAPLSRMDRIADILKDVNTATQEYLQAFGVKVNM NKLSVRARVLEPPKVILGQDVSLDLSTNTENEYSWSMKDRRVFQTGEALC TWGVLVLADVQRYDVKQFVFAVMHVLRGYGMEVKEPRINYSHTPLLVKDM IALKQEIDNDASTPGTCQLMMVIKETTATRDYNKIKNVSDTYLGIPSQCV VSSQVRQPTLLYCLNLCMKINAKLGGVTARIPGDNFACLGDRFLVVGATV SHPSHMEQTGDAPSVASMVGSLDKRCGRFGGAIKLQAPTAEGIQEFGALL QSIMTLFHSHEKFLPENILIYRNGVADGQFARVLRVELDEARQAAIEYGR QRNMPDYNPKITFIVMQRGHHMRFFPMDNGPKDLSSNCVPGTVIDTDVTH PQHYDFYLISHNGIQGTSRPMRYTVLKDEIGFGPDEIQGLTYRLCYLFTR CSRSVSMVPAVYYADLLAVRGRAFLAARSSARLELIPGQPPLASEDPLPA TFSSGTPVLHSDLQMRFFYV* back to topspliced messenger RNA >Gchil3327.t1 ID=Gchil3327.t1|Name=Gchil3327.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2763bp|location=Sequence derived from alignment at tig00000168_pilon:196207..198969+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTCGTATGGACCGCCTCGTGGTGGCTTCACCCCGCGCGGTGATCCTCG CTCCGCCCAGCCATCAGCCCCTGTAACGCGTCCTACCCAGGCCGAAGTCC TTCGCGATCTTCGCGATATCGGTGCCTCTACCAGGGATGGTCGCTTCGGA AAGGCTGGTCGTCCCGTCGATGTCAAAGTCAATTGCTTCCCAGTTGACAT CTCAGCTCTCACCCAGTTCATCACTCACTACGACCTTGTTTTTGAAGAGA TCGAAGATGAATCTTCATCAGGCggtcgtggtggccgtggtggtcgcggt cgtggtaggggtcgaggtcgtggtcgtggAAGGGGAGATCGCGGTGCAGC TCAACCAGAAAGATTGCTTCCCATTGGCATTGCTACCAAGCTTGTGCGCA GCATCGAACGTGACTATGCGTTTGACTTTGGCAGTTCGAAGATTGCACAT GATGGTCGCAAGAACGCCTACACTGCATTTCATCCTAACTGGGAAGGTGG CCGCAAGGAGTTCCGCGCCGAGTGGGAGGGCAAGCAATATAAAATTCTCT TCAAGATCGCCAATCAGGTCAACATGGGCGAGCTCTCCGAGTTTATCAAC AAGAACGTTACTGTCGTTCCGCAGGAAGCCATTACCGTGCTGGATATTGC TTTGCGCACCTGTCCGCTCCGTGAATGGGTATACACCGGAAAGACTTTCG CGGTTCAGCCACCATCCGCAGACATTCAGAATCGGATCGGTAGCGGTTGC GAGGCATGGGTGTGTTACTACCAGTGCTTCCGTCCGAAAGATAACGGCAT GTTCTTGTCTTTTGATGTCAACTACAGTGCCTTCTACACTTCGCAGACCG TGTACGACTACGCCATCGAGATTCTTTCCTCAGAAACGCCTCTACAAACT CCATTGAACAGGCAGAAAACTGCCCAGTTAGAGAACGAGCTTCGTGGAGT GAAGGTTGAACAACTATATTTGCAAGAATCGGAACGTAAGCCGCACGTAG TGAGGAGGCTCACCCAGCAGCCGGCTTCAGATCTCGAATTCGAAGGTCAA ACTGCTCGTGTATCTGTGGCACAGCATTTTTCAAGCATCGGCAGAACATT AGATCATCCTGATATGCCTTGCATCGATATTTCAGCCGGTAAGAGCCATA CTTACATTCCTTTAGAACTCGCCCGTATCGTTCCAGGACAGCGCCGGCGG GCCATGCTCAGCCGAGAGATGAAGGAGCGCATGGCACATATGGCAGCCCA GGCTCCATTATCTCGGATGGACCGAATCGCTGATATCCTCAAAGATGTAA ACACGGCTACACAGGAGTATCTTCAGGCCTTTGGCGTCAAGGTCAACATG AACAAGTTGTCCGTTCGTGCGAGAGTCTTGGAACCACCGAAGGTCATTTT GGGCCAAGATGTGTCCCTAGATCTTTCCACAAACACGGAGAACGAATATT CGTGGAGTATGAAAGACCGGCGAGTGTTCCAAACTGGAGAAGCATTGTGC ACGTGGGGAGTGCTTGTGTTGGCCGACGTGCAAAGGTATGATGTGAAACA ATTTGTTTTCGCCGTGATGCACGTGCTCCGTGGCTACGGAATGGAAGTGA AGGAACCGAGAATCAATTATAGCCACACCCCGTTGTTGGTCAAGGATATG ATTGCCTTGAAACAAGAGATTGACAATGATGCGAGCACCCCAGGCACTTG CCAGCTGATGATGGTAATCAAGGAGACTACAGCGACCCGAGACTACAACA AGATTAAGAACGTGAGTGATACTTATCTCGGAATACCATCTCAGTGTGTT GTCTCGAGTCAAGTGAGACAGCCAACATTGCTGTACTGCCTCAATCTTTG CATGAAGATCAATGCAAAACTTGGAGGTGTGACTGCCCGAATTCCTGGAG ATAATTTTGCCTGCCTTGGTGATCGCTTTTTAGTAGTGGGCGCAACTGTC TCACATCCTTCTCACATGGAACAGACAGGTGATGCACCATCTGTGGCATC CATGGTTGGGAGCTTGGACAAAAGATGCGGGCGATTCGGAGGGGCCATCA AACTGCAAGCGCCGACAGCCGAAGGCATCCAGGAGTTCGGTGCTTTGCTC CAATCCATTATGACTCTTTTTCATTCCCATGAAAAATTCCTGCCAGAGAA CATTCTCATATATAGAAATGGCGTTGCCGATGGCCAGTTTGCCCGGGTGC TAAGAGTAGAACTCGACGAAGCTCGACAGGCGGCAATTGAATATGGGCGG CAGCGAAATATGCCTGACTATAACCCAAAGATCACTTTCATCGTGATGCA GCGCGGGCATCACATGCGCTTCTTCCCAATGGATAATGGACCAAAAGACC TCTCAAGCAACTGCGTCCCAGGAACTGTGATTGACACTGACGTAACGCAT CCGCAGCATTATGACTTTTATTTGATTAGTCATAATGGCATTCAAGGGAC TTCCCGACCTATGCGATACACTGTGTTGAAGGATGAAATCGGATTTGGAC CTGATGAAATTCAAGGACTTACATACCGTCTTTGCTATTTGTTTACTAGG TGTTCGCGTAGTGTTTCAATGGTTCCAGCTGTGTACTATGCCGACTTACT CGCAGTAAGAGGTAGGGCGTTTTTAGCAGCTCGAAGCTCTGCACGTCTTG AGCTCATTCCAGGACAGCCTCCTCTTGCAAGCGAAGATCCTCTTCCGGCC ACGTTCTCTTCAGGTACACCTGTACTCCACTCGGACCTTCAGATGCGTTT CTTCTACGTGTAG back to topprotein sequence of Gchil3327.t1 >Gchil3327.t1 ID=Gchil3327.t1|Name=Gchil3327.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=921bp
MSYGPPRGGFTPRGDPRSAQPSAPVTRPTQAEVLRDLRDIGASTRDGRFG KAGRPVDVKVNCFPVDISALTQFITHYDLVFEEIEDESSSGGRGGRGGRG RGRGRGRGRGRGDRGAAQPERLLPIGIATKLVRSIERDYAFDFGSSKIAH DGRKNAYTAFHPNWEGGRKEFRAEWEGKQYKILFKIANQVNMGELSEFIN KNVTVVPQEAITVLDIALRTCPLREWVYTGKTFAVQPPSADIQNRIGSGC EAWVCYYQCFRPKDNGMFLSFDVNYSAFYTSQTVYDYAIEILSSETPLQT PLNRQKTAQLENELRGVKVEQLYLQESERKPHVVRRLTQQPASDLEFEGQ TARVSVAQHFSSIGRTLDHPDMPCIDISAGKSHTYIPLELARIVPGQRRR AMLSREMKERMAHMAAQAPLSRMDRIADILKDVNTATQEYLQAFGVKVNM NKLSVRARVLEPPKVILGQDVSLDLSTNTENEYSWSMKDRRVFQTGEALC TWGVLVLADVQRYDVKQFVFAVMHVLRGYGMEVKEPRINYSHTPLLVKDM IALKQEIDNDASTPGTCQLMMVIKETTATRDYNKIKNVSDTYLGIPSQCV VSSQVRQPTLLYCLNLCMKINAKLGGVTARIPGDNFACLGDRFLVVGATV SHPSHMEQTGDAPSVASMVGSLDKRCGRFGGAIKLQAPTAEGIQEFGALL QSIMTLFHSHEKFLPENILIYRNGVADGQFARVLRVELDEARQAAIEYGR QRNMPDYNPKITFIVMQRGHHMRFFPMDNGPKDLSSNCVPGTVIDTDVTH PQHYDFYLISHNGIQGTSRPMRYTVLKDEIGFGPDEIQGLTYRLCYLFTR CSRSVSMVPAVYYADLLAVRGRAFLAARSSARLELIPGQPPLASEDPLPA TFSSGTPVLHSDLQMRFFYV* back to topmRNA from alignment at tig00000168_pilon:196207..198969+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil3327.t1 ID=Gchil3327.t1|Name=Gchil3327.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2763bp|location=Sequence derived from alignment at tig00000168_pilon:196207..198969+ (Gracilaria chilensis NLEC103_M9 male) ATGTCGTATGGACCGCCTCGTGGTGGCTTCACCCCGCGCGGTGATCCTCG
CTCCGCCCAGCCATCAGCCCCTGTAACGCGTCCTACCCAGGCCGAAGTCC
TTCGCGATCTTCGCGATATCGGTGCCTCTACCAGGGATGGTCGCTTCGGA
AAGGCTGGTCGTCCCGTCGATGTCAAAGTCAATTGCTTCCCAGTTGACAT
CTCAGCTCTCACCCAGTTCATCACTCACTACGACCTTGTTTTTGAAGAGA
TCGAAGATGAATCTTCATCAGGCggtcgtggtggccgtggtggtcgcggt
cgtggtaggggtcgaggtcgtggtcgtggAAGGGGAGATCGCGGTGCAGC
TCAACCAGAAAGATTGCTTCCCATTGGCATTGCTACCAAGCTTGTGCGCA
GCATCGAACGTGACTATGCGTTTGACTTTGGCAGTTCGAAGATTGCACAT
GATGGTCGCAAGAACGCCTACACTGCATTTCATCCTAACTGGGAAGGTGG
CCGCAAGGAGTTCCGCGCCGAGTGGGAGGGCAAGCAATATAAAATTCTCT
TCAAGATCGCCAATCAGGTCAACATGGGCGAGCTCTCCGAGTTTATCAAC
AAGAACGTTACTGTCGTTCCGCAGGAAGCCATTACCGTGCTGGATATTGC
TTTGCGCACCTGTCCGCTCCGTGAATGGGTATACACCGGAAAGACTTTCG
CGGTTCAGCCACCATCCGCAGACATTCAGAATCGGATCGGTAGCGGTTGC
GAGGCATGGGTGTGTTACTACCAGTGCTTCCGTCCGAAAGATAACGGCAT
GTTCTTGTCTTTTGATGTCAACTACAGTGCCTTCTACACTTCGCAGACCG
TGTACGACTACGCCATCGAGATTCTTTCCTCAGAAACGCCTCTACAAACT
CCATTGAACAGGCAGAAAACTGCCCAGTTAGAGAACGAGCTTCGTGGAGT
GAAGGTTGAACAACTATATTTGCAAGAATCGGAACGTAAGCCGCACGTAG
TGAGGAGGCTCACCCAGCAGCCGGCTTCAGATCTCGAATTCGAAGGTCAA
ACTGCTCGTGTATCTGTGGCACAGCATTTTTCAAGCATCGGCAGAACATT
AGATCATCCTGATATGCCTTGCATCGATATTTCAGCCGGTAAGAGCCATA
CTTACATTCCTTTAGAACTCGCCCGTATCGTTCCAGGACAGCGCCGGCGG
GCCATGCTCAGCCGAGAGATGAAGGAGCGCATGGCACATATGGCAGCCCA
GGCTCCATTATCTCGGATGGACCGAATCGCTGATATCCTCAAAGATGTAA
ACACGGCTACACAGGAGTATCTTCAGGCCTTTGGCGTCAAGGTCAACATG
AACAAGTTGTCCGTTCGTGCGAGAGTCTTGGAACCACCGAAGGTCATTTT
GGGCCAAGATGTGTCCCTAGATCTTTCCACAAACACGGAGAACGAATATT
CGTGGAGTATGAAAGACCGGCGAGTGTTCCAAACTGGAGAAGCATTGTGC
ACGTGGGGAGTGCTTGTGTTGGCCGACGTGCAAAGGTATGATGTGAAACA
ATTTGTTTTCGCCGTGATGCACGTGCTCCGTGGCTACGGAATGGAAGTGA
AGGAACCGAGAATCAATTATAGCCACACCCCGTTGTTGGTCAAGGATATG
ATTGCCTTGAAACAAGAGATTGACAATGATGCGAGCACCCCAGGCACTTG
CCAGCTGATGATGGTAATCAAGGAGACTACAGCGACCCGAGACTACAACA
AGATTAAGAACGTGAGTGATACTTATCTCGGAATACCATCTCAGTGTGTT
GTCTCGAGTCAAGTGAGACAGCCAACATTGCTGTACTGCCTCAATCTTTG
CATGAAGATCAATGCAAAACTTGGAGGTGTGACTGCCCGAATTCCTGGAG
ATAATTTTGCCTGCCTTGGTGATCGCTTTTTAGTAGTGGGCGCAACTGTC
TCACATCCTTCTCACATGGAACAGACAGGTGATGCACCATCTGTGGCATC
CATGGTTGGGAGCTTGGACAAAAGATGCGGGCGATTCGGAGGGGCCATCA
AACTGCAAGCGCCGACAGCCGAAGGCATCCAGGAGTTCGGTGCTTTGCTC
CAATCCATTATGACTCTTTTTCATTCCCATGAAAAATTCCTGCCAGAGAA
CATTCTCATATATAGAAATGGCGTTGCCGATGGCCAGTTTGCCCGGGTGC
TAAGAGTAGAACTCGACGAAGCTCGACAGGCGGCAATTGAATATGGGCGG
CAGCGAAATATGCCTGACTATAACCCAAAGATCACTTTCATCGTGATGCA
GCGCGGGCATCACATGCGCTTCTTCCCAATGGATAATGGACCAAAAGACC
TCTCAAGCAACTGCGTCCCAGGAACTGTGATTGACACTGACGTAACGCAT
CCGCAGCATTATGACTTTTATTTGATTAGTCATAATGGCATTCAAGGGAC
TTCCCGACCTATGCGATACACTGTGTTGAAGGATGAAATCGGATTTGGAC
CTGATGAAATTCAAGGACTTACATACCGTCTTTGCTATTTGTTTACTAGG
TGTTCGCGTAGTGTTTCAATGGTTCCAGCTGTGTACTATGCCGACTTACT
CGCAGTAAGAGGTAGGGCGTTTTTAGCAGCTCGAAGCTCTGCACGTCTTG
AGCTCATTCCAGGACAGCCTCCTCTTGCAAGCGAAGATCCTCTTCCGGCC
ACGTTCTCTTCAGGTACACCTGTACTCCACTCGGACCTTCAGATGCGTTT
CTTCTACGTGTAG back to topCoding sequence (CDS) from alignment at tig00000168_pilon:196207..198969+ >Gchil3327.t1 ID=Gchil3327.t1|Name=Gchil3327.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2763bp|location=Sequence derived from alignment at tig00000168_pilon:196207..198969+ (Gracilaria chilensis NLEC103_M9 male) ATGTCGTATGGACCGCCTCGTGGTGGCTTCACCCCGCGCGGTGATCCTCG CTCCGCCCAGCCATCAGCCCCTGTAACGCGTCCTACCCAGGCCGAAGTCC TTCGCGATCTTCGCGATATCGGTGCCTCTACCAGGGATGGTCGCTTCGGA AAGGCTGGTCGTCCCGTCGATGTCAAAGTCAATTGCTTCCCAGTTGACAT CTCAGCTCTCACCCAGTTCATCACTCACTACGACCTTGTTTTTGAAGAGA TCGAAGATGAATCTTCATCAGGCggtcgtggtggccgtggtggtcgcggt cgtggtaggggtcgaggtcgtggtcgtggAAGGGGAGATCGCGGTGCAGC TCAACCAGAAAGATTGCTTCCCATTGGCATTGCTACCAAGCTTGTGCGCA GCATCGAACGTGACTATGCGTTTGACTTTGGCAGTTCGAAGATTGCACAT GATGGTCGCAAGAACGCCTACACTGCATTTCATCCTAACTGGGAAGGTGG CCGCAAGGAGTTCCGCGCCGAGTGGGAGGGCAAGCAATATAAAATTCTCT TCAAGATCGCCAATCAGGTCAACATGGGCGAGCTCTCCGAGTTTATCAAC AAGAACGTTACTGTCGTTCCGCAGGAAGCCATTACCGTGCTGGATATTGC TTTGCGCACCTGTCCGCTCCGTGAATGGGTATACACCGGAAAGACTTTCG CGGTTCAGCCACCATCCGCAGACATTCAGAATCGGATCGGTAGCGGTTGC GAGGCATGGGTGTGTTACTACCAGTGCTTCCGTCCGAAAGATAACGGCAT GTTCTTGTCTTTTGATGTCAACTACAGTGCCTTCTACACTTCGCAGACCG TGTACGACTACGCCATCGAGATTCTTTCCTCAGAAACGCCTCTACAAACT CCATTGAACAGGCAGAAAACTGCCCAGTTAGAGAACGAGCTTCGTGGAGT GAAGGTTGAACAACTATATTTGCAAGAATCGGAACGTAAGCCGCACGTAG TGAGGAGGCTCACCCAGCAGCCGGCTTCAGATCTCGAATTCGAAGGTCAA ACTGCTCGTGTATCTGTGGCACAGCATTTTTCAAGCATCGGCAGAACATT AGATCATCCTGATATGCCTTGCATCGATATTTCAGCCGGTAAGAGCCATA CTTACATTCCTTTAGAACTCGCCCGTATCGTTCCAGGACAGCGCCGGCGG GCCATGCTCAGCCGAGAGATGAAGGAGCGCATGGCACATATGGCAGCCCA GGCTCCATTATCTCGGATGGACCGAATCGCTGATATCCTCAAAGATGTAA ACACGGCTACACAGGAGTATCTTCAGGCCTTTGGCGTCAAGGTCAACATG AACAAGTTGTCCGTTCGTGCGAGAGTCTTGGAACCACCGAAGGTCATTTT GGGCCAAGATGTGTCCCTAGATCTTTCCACAAACACGGAGAACGAATATT CGTGGAGTATGAAAGACCGGCGAGTGTTCCAAACTGGAGAAGCATTGTGC ACGTGGGGAGTGCTTGTGTTGGCCGACGTGCAAAGGTATGATGTGAAACA ATTTGTTTTCGCCGTGATGCACGTGCTCCGTGGCTACGGAATGGAAGTGA AGGAACCGAGAATCAATTATAGCCACACCCCGTTGTTGGTCAAGGATATG ATTGCCTTGAAACAAGAGATTGACAATGATGCGAGCACCCCAGGCACTTG CCAGCTGATGATGGTAATCAAGGAGACTACAGCGACCCGAGACTACAACA AGATTAAGAACGTGAGTGATACTTATCTCGGAATACCATCTCAGTGTGTT GTCTCGAGTCAAGTGAGACAGCCAACATTGCTGTACTGCCTCAATCTTTG CATGAAGATCAATGCAAAACTTGGAGGTGTGACTGCCCGAATTCCTGGAG ATAATTTTGCCTGCCTTGGTGATCGCTTTTTAGTAGTGGGCGCAACTGTC TCACATCCTTCTCACATGGAACAGACAGGTGATGCACCATCTGTGGCATC CATGGTTGGGAGCTTGGACAAAAGATGCGGGCGATTCGGAGGGGCCATCA AACTGCAAGCGCCGACAGCCGAAGGCATCCAGGAGTTCGGTGCTTTGCTC CAATCCATTATGACTCTTTTTCATTCCCATGAAAAATTCCTGCCAGAGAA CATTCTCATATATAGAAATGGCGTTGCCGATGGCCAGTTTGCCCGGGTGC TAAGAGTAGAACTCGACGAAGCTCGACAGGCGGCAATTGAATATGGGCGG CAGCGAAATATGCCTGACTATAACCCAAAGATCACTTTCATCGTGATGCA GCGCGGGCATCACATGCGCTTCTTCCCAATGGATAATGGACCAAAAGACC TCTCAAGCAACTGCGTCCCAGGAACTGTGATTGACACTGACGTAACGCAT CCGCAGCATTATGACTTTTATTTGATTAGTCATAATGGCATTCAAGGGAC TTCCCGACCTATGCGATACACTGTGTTGAAGGATGAAATCGGATTTGGAC CTGATGAAATTCAAGGACTTACATACCGTCTTTGCTATTTGTTTACTAGG TGTTCGCGTAGTGTTTCAATGGTTCCAGCTGTGTACTATGCCGACTTACT CGCAGTAAGAGGTAGGGCGTTTTTAGCAGCTCGAAGCTCTGCACGTCTTG AGCTCATTCCAGGACAGCCTCCTCTTGCAAGCGAAGATCCTCTTCCGGCC ACGTTCTCTTCAGGTACACCTGTACTCCACTCGGACCTTCAGATGCGTTT CTTCTACGTGTAG back to top
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