Gchil3325.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil3325.t1
Unique NameGchil3325.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length384
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:190871..192022 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3325Gchil3325Gracilaria chilensis NLEC103_M9 malegenetig00000168_pilon 190871..192022 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3325.t1.start1Gchil3325.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000168_pilon 190871..190873 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3325.t1.CDS1Gchil3325.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000168_pilon 190871..192022 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3325.t1.exon1Gchil3325.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000168_pilon 190871..192022 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3325.t1.stop1Gchil3325.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000168_pilon 192020..192022 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3325.t1Gchil3325.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000168_pilon 190871..192022 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil3325.t1 ID=Gchil3325.t1|Name=Gchil3325.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=384bp
MGSADGVHLSCASCSHIVRAGIKDSRCFKAASGIVVAGDNDAVCPPGTKG
DDGLGVCIACERGTFSAAGNGTECARCPAGSVQPSIMATNCIPCADGTVP
DEELLQCVVPQTNCPVGMELITSPDAPEGSDNGSRLQCRSPDCETPPSSA
SSAASRACGSCKPSEYMNADMSCSLCAPNSVSDGKFCVECPSGLVRDVDT
CACRGIFAQNKGLFDGVCQKCTPGSYGLSVNMLGSNSCVQCPAGTYRDLS
NDDSVASCDPSSIESCPDPVPCKRCPPNTITREPGATEYLPCPNGTFSYG
IGETECLREGAASEPVSVNNALGFVSDEDAEETEGRPDLILDEVDDMTTT
ADPEESQIPEMGLQSTESPMFSSEPVLETSEES*
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spliced messenger RNA

>Gchil3325.t1 ID=Gchil3325.t1|Name=Gchil3325.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1152bp|location=Sequence derived from alignment at tig00000168_pilon:190871..192022+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCAGCGCAGATGGTGTACATTTGAGTTGTGCATCGTGTTCACATAT
TGTTCGTGCTGGCATTAAGGACTCTAGGTGTTTCAAGGCCGCTTCTGGCA
TCGTCGTCGCCGGAGACAACGATGCTGTGTGCCCTCCTGGTACAAAGGGA
GATGACGGATTGGGAGTATGCATCGCCTGCGAGCGAGGAACGTTTTCTGC
AGCTGGAAATGGTACCGAGTGTGCGAGATGTCCGGCGGGCAGTGTGCAAC
CAAGCATTATGGCCACTAATTGCATTCCATGTGCTGATGGAACCGTGCCT
GATGAAGAATTACTTCAGTGTGTCGTTCCGCAGACAAATTGCCCAGTTGG
AATGGAGTTGATAACCAGCCCTGATGCACCCGAAGGAAGCGACAACGGCA
GCAGATTACAATGCCGTTCTCCTGACTGCGAAACTCCTCCTTCGAGTGCA
TCATCTGCAGCATCTCGGGCCTGTGGAAGTTGCAAACCAAGCGAGTATAT
GAACGCTGACATGTCTTGTAGTCTCTGTGCACCAAATTCTGTAAGTGATG
GAAAGTTTTGCGTAGAATGTCCCTCTGGACTCGTGCGAGATGTAGACACC
TGCGCTTGTCGAGGAATCTTTGCACAGAACAAGGGTCTCTTCGATGGTGT
TTGTCAAAAGTGTACCCCGGGAAGCTATGGACTCAGTGTGAACATGTTGG
GCTCGAATTCATGTGTGCAATGTCCTGCAGGCACATATCGTGATCTTTCT
AACGATGATAGTGTTGCATCTTGTGATCCATCGTCTATTGAATCTTGTCC
AGATCCTGTACCGTGCAAAAGGTGCCCTCCCAATACCATAACCAGAGAGC
CAGGGGCTACTGAGTATCTACCATGTCCAAATGGAACCTTTTCGTATGGC
ATTGGGGAAACCGAATGTTTAAGAGAAGGGGCGGCGTCCGAGCCTGTATC
CGTCAATAATGCTCTTGGTTTCGTGTCAGACGAAGACGCCGAGGAGACAG
AAGGAAGGCCAGATCTTATCTTAGATGAGGTGGATGATATGACGACAACC
GCTGATCCAGAAGAGTCTCAAATACCAGAGATGGGTCTGCAATCCACCGA
GAGTCCAATGTTTTCTTCTGAGCCTGTCTTAGAAACCAGTGAAGAATCTT
AA
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protein sequence of Gchil3325.t1

>Gchil3325.t1 ID=Gchil3325.t1|Name=Gchil3325.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=384bp
MGSADGVHLSCASCSHIVRAGIKDSRCFKAASGIVVAGDNDAVCPPGTKG
DDGLGVCIACERGTFSAAGNGTECARCPAGSVQPSIMATNCIPCADGTVP
DEELLQCVVPQTNCPVGMELITSPDAPEGSDNGSRLQCRSPDCETPPSSA
SSAASRACGSCKPSEYMNADMSCSLCAPNSVSDGKFCVECPSGLVRDVDT
CACRGIFAQNKGLFDGVCQKCTPGSYGLSVNMLGSNSCVQCPAGTYRDLS
NDDSVASCDPSSIESCPDPVPCKRCPPNTITREPGATEYLPCPNGTFSYG
IGETECLREGAASEPVSVNNALGFVSDEDAEETEGRPDLILDEVDDMTTT
ADPEESQIPEMGLQSTESPMFSSEPVLETSEES*
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mRNA from alignment at tig00000168_pilon:190871..192022+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil3325.t1 ID=Gchil3325.t1|Name=Gchil3325.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1152bp|location=Sequence derived from alignment at tig00000168_pilon:190871..192022+ (Gracilaria chilensis NLEC103_M9 male)
ATGGGCAGCGCAGATGGTGTACATTTGAGTTGTGCATCGTGTTCACATAT
TGTTCGTGCTGGCATTAAGGACTCTAGGTGTTTCAAGGCCGCTTCTGGCA
TCGTCGTCGCCGGAGACAACGATGCTGTGTGCCCTCCTGGTACAAAGGGA
GATGACGGATTGGGAGTATGCATCGCCTGCGAGCGAGGAACGTTTTCTGC
AGCTGGAAATGGTACCGAGTGTGCGAGATGTCCGGCGGGCAGTGTGCAAC
CAAGCATTATGGCCACTAATTGCATTCCATGTGCTGATGGAACCGTGCCT
GATGAAGAATTACTTCAGTGTGTCGTTCCGCAGACAAATTGCCCAGTTGG
AATGGAGTTGATAACCAGCCCTGATGCACCCGAAGGAAGCGACAACGGCA
GCAGATTACAATGCCGTTCTCCTGACTGCGAAACTCCTCCTTCGAGTGCA
TCATCTGCAGCATCTCGGGCCTGTGGAAGTTGCAAACCAAGCGAGTATAT
GAACGCTGACATGTCTTGTAGTCTCTGTGCACCAAATTCTGTAAGTGATG
GAAAGTTTTGCGTAGAATGTCCCTCTGGACTCGTGCGAGATGTAGACACC
TGCGCTTGTCGAGGAATCTTTGCACAGAACAAGGGTCTCTTCGATGGTGT
TTGTCAAAAGTGTACCCCGGGAAGCTATGGACTCAGTGTGAACATGTTGG
GCTCGAATTCATGTGTGCAATGTCCTGCAGGCACATATCGTGATCTTTCT
AACGATGATAGTGTTGCATCTTGTGATCCATCGTCTATTGAATCTTGTCC
AGATCCTGTACCGTGCAAAAGGTGCCCTCCCAATACCATAACCAGAGAGC
CAGGGGCTACTGAGTATCTACCATGTCCAAATGGAACCTTTTCGTATGGC
ATTGGGGAAACCGAATGTTTAAGAGAAGGGGCGGCGTCCGAGCCTGTATC
CGTCAATAATGCTCTTGGTTTCGTGTCAGACGAAGACGCCGAGGAGACAG
AAGGAAGGCCAGATCTTATCTTAGATGAGGTGGATGATATGACGACAACC
GCTGATCCAGAAGAGTCTCAAATACCAGAGATGGGTCTGCAATCCACCGA
GAGTCCAATGTTTTCTTCTGAGCCTGTCTTAGAAACCAGTGAAGAATCTT
AA
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Coding sequence (CDS) from alignment at tig00000168_pilon:190871..192022+

>Gchil3325.t1 ID=Gchil3325.t1|Name=Gchil3325.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1152bp|location=Sequence derived from alignment at tig00000168_pilon:190871..192022+ (Gracilaria chilensis NLEC103_M9 male)
ATGGGCAGCGCAGATGGTGTACATTTGAGTTGTGCATCGTGTTCACATAT
TGTTCGTGCTGGCATTAAGGACTCTAGGTGTTTCAAGGCCGCTTCTGGCA
TCGTCGTCGCCGGAGACAACGATGCTGTGTGCCCTCCTGGTACAAAGGGA
GATGACGGATTGGGAGTATGCATCGCCTGCGAGCGAGGAACGTTTTCTGC
AGCTGGAAATGGTACCGAGTGTGCGAGATGTCCGGCGGGCAGTGTGCAAC
CAAGCATTATGGCCACTAATTGCATTCCATGTGCTGATGGAACCGTGCCT
GATGAAGAATTACTTCAGTGTGTCGTTCCGCAGACAAATTGCCCAGTTGG
AATGGAGTTGATAACCAGCCCTGATGCACCCGAAGGAAGCGACAACGGCA
GCAGATTACAATGCCGTTCTCCTGACTGCGAAACTCCTCCTTCGAGTGCA
TCATCTGCAGCATCTCGGGCCTGTGGAAGTTGCAAACCAAGCGAGTATAT
GAACGCTGACATGTCTTGTAGTCTCTGTGCACCAAATTCTGTAAGTGATG
GAAAGTTTTGCGTAGAATGTCCCTCTGGACTCGTGCGAGATGTAGACACC
TGCGCTTGTCGAGGAATCTTTGCACAGAACAAGGGTCTCTTCGATGGTGT
TTGTCAAAAGTGTACCCCGGGAAGCTATGGACTCAGTGTGAACATGTTGG
GCTCGAATTCATGTGTGCAATGTCCTGCAGGCACATATCGTGATCTTTCT
AACGATGATAGTGTTGCATCTTGTGATCCATCGTCTATTGAATCTTGTCC
AGATCCTGTACCGTGCAAAAGGTGCCCTCCCAATACCATAACCAGAGAGC
CAGGGGCTACTGAGTATCTACCATGTCCAAATGGAACCTTTTCGTATGGC
ATTGGGGAAACCGAATGTTTAAGAGAAGGGGCGGCGTCCGAGCCTGTATC
CGTCAATAATGCTCTTGGTTTCGTGTCAGACGAAGACGCCGAGGAGACAG
AAGGAAGGCCAGATCTTATCTTAGATGAGGTGGATGATATGACGACAACC
GCTGATCCAGAAGAGTCTCAAATACCAGAGATGGGTCTGCAATCCACCGA
GAGTCCAATGTTTTCTTCTGAGCCTGTCTTAGAAACCAGTGAAGAATCTT
AA
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