Gchil3321.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil3321.t1
Unique NameGchil3321.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length800
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:130381..132780 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3321Gchil3321Gracilaria chilensis NLEC103_M9 malegenetig00000168_pilon 130381..132780 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3321.t1.stop1Gchil3321.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000168_pilon 130381..130383 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3321.t1.CDS1Gchil3321.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000168_pilon 130381..132780 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3321.t1.exon1Gchil3321.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000168_pilon 130381..132780 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3321.t1.start1Gchil3321.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000168_pilon 132778..132780 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3321.t1Gchil3321.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000168_pilon 130381..132780 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil3321.t1 ID=Gchil3321.t1|Name=Gchil3321.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=800bp
MPLSFTPPLTPPFTLSMSAAPSPPSTPPHSNLLNTYAAHMKSLSAALDTR
AHALRTAEARLESRGSALRAHERALATLERRMRSEMTAFLRDVAARQRQL
SRWEQRAEKGRKLVASITNNKEQLKTTKTALEHKNAQLQLVEKEYAALSQ
SREAITSQIDAAKSELSRLATEARRISEEKIRLETLANRLETLESAVRKR
ERDVDATEAAVVLKSERLASLENFERVVAPLQAFVDEFSALEQREAVSIR
DDVAEGVQIALLALRDMQSRLRALKDARAQLDSLQATLEQREKGLREREL
STRQREHNLDVTEARVSNEQDKLSMQSNQLQDGMRSLDDTRADIDRREEA
IHKRERELMQRETKLNHREAAITQSEKTLSRRERSLRRAHAAVTERETLI
DKREREVETERANFNNMKRSIDLREAMLETRELELVAREASLPDNSRPLF
SDNSATNNRQPPGFERDAQLDVPKTGDIIGEEVTREHSVSEEGGKDDIAK
VTLSRKQPPLRTVRRQLEFESINRRLPNHSQKDAQPTDRDEDDNESEVAA
EQLLPELVSARALWKERILRLEIVVRNMRENTWGLKAHVRPVLNAVAERL
GSVRTEIEETPLQHSAGSAKRDYATEQSLQVHWGSIMREQLDAVREVQTG
MLIGLNKQEDLAQAGENSDKSSSTGGRNSGSRSAGSLEQESSVEATLDVT
TTVELKDDLVRKKKEARARPSLFQGVGSRRQARGSQDDSMALQAKDEGLT
RRTRRRIAVGNTRLGEPRAAHTKDSATDLFQELASLRSELDTITGILNI*
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spliced messenger RNA

>Gchil3321.t1 ID=Gchil3321.t1|Name=Gchil3321.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2400bp|location=Sequence derived from alignment at tig00000168_pilon:130381..132780- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCACTGTCTTTCACGCCGCCGCTCACGCCGCCGTTCACGCTATCCAT
GTCGGCTGCGCCTTCTCCGCCCTCTACCCCGCCGCACAGCAACCTGCTCA
ACACTTACGCCGCCCACATGAAGAGTCTTTCCGCCGCGCTCGACACACGC
GCACACGCCTTGCGGACTGCGGAGGCACGGTTGGAGAGCCGCGGCAGCGC
CCTCCGCGCCCACGAGAGGGCTTTGGCCACGCTCGAACGTCGAATGAGGT
CTGAGATGACTGCGTTTCTTCGCGATGTCGCTGCGAGGCAAAGGCAGCTG
TCGCGCTGGGAGCAGCGCGCTGAGAAGGGCAGAAAGCTTGTCGCTTCTAT
TACAAACAATAAGGAGCAATTGAAGACCACTAAAACAGCCCTCGAACATA
AGAATGCCCAGCTTCAGCTAGTGGAGAAGGAGTATGCCGCGCTGTCTCAA
TCTCGCGAAGCCATTACTTCTCAGATTGACGCCGCCAAATCAGAGCTTAG
CAGGTTAGCCACAGAGGCTCGACGTATTTCCGAAGAAAAGATTCGCCTCG
AAACTCTTGCTAACCGTCTTGAAACGCTTGAGAGTGCAGTCAGGAAACGA
GAGCGCGATGTTGATGCCACCGAGGCTGCTGTTGTCCTTAAGTCGGAGCG
CTTGGCCTCTCTCGAGAACTTTGAGCGCGTTGTTGCACCGCTTCAGGCAT
TTGTTGATGAATTTTCTGCCTTGGAACAAAGGGAAGCTGTTTCGATACGC
GATGATGTCGCTGAGGGCGTTCAGATTGCCCTTTTGGCTCTGCGTGATAT
GCAATCCAGATTACGGGCTTTGAAGGATGCGCGCGCTCAATTGGATTCGT
TGCAAGCTACTCTTGAACAAAGGGAAAAGGGTTTGAGAGAAAGAGAGCTT
TCTACAAGACAAAGAGAACATAATTTGGATGTCACTGAAGCTAGAGTTTC
TAATGAACAGGATAAACTATCTATGCAGAGTAATCAATTGCAGGATGGAA
TGCGTTCTCTTGATGATACTCGTGCGGATATCGATCGACGGGAAGAGGCA
ATTCACAAAAGGGAACGCGAGTTAATGCAGAGAGAGACGAAACTGAACCA
TCGTGAAGCGGCTATCACCCAATCTGAAAAAACTCTCTCGAGGAGGGAGC
GTTCTCTTCGTCGAGCTCATGCCGCTGTCACAGAACGAGAAACGCTCATC
GATAAGCGTGAGCGGGAAGTCGAAACCGAACGCGCCAATTTTAACAACAT
GAAGCGTTCTATAGATCTTCGTGAGGCCATGTTGGAGACAAGGGAACTTG
AACTCGTGGCGAGGGAAGCATCGTTACCGGATAATTCACGCCCGTTATTC
TCTGACAATTCTGCAACGAACAATCGGCAGCCGCCAGGGTTTGAACGTGA
TGCGCAGTTGGATGTTCCAAAGACTGGTGATATAATTGGTGAGGAGGTTA
CAAGAGAGCACTCGGTGAGCGAAGAAGGCGGAAAGGATGACATTGCAAAA
GTGACATTATCTCGAAAGCAGCCGCCTCTGCGAACTGTTCGACGCCAGTT
AGAGTTTGAGTCAATTAATAGAAGGCTTCCTAACCATAGCCAAAAAGACG
CGCAACCGACTGATCGCGATGAGGATGACAACGAGAGTGAAGTAGCGGCC
GAGCAGTTGCTACCAGAACTTGTGAGTGCTAGAGCACTATGGAAGGAACG
TATATTGAGACTGGAAATAGTTGTGCGAAACATGCGCGAAAATACATGGG
GATTGAAAGCTCATGTACGTCCCGTGCTGAATGCAGTGGCAGAAAGACTC
GGTTCCGTGAGAACAGAAATCGAAGAGACCCCATTGCAGCATTCTGCGGG
GAGTGCAAAGCGTGATTACGCGACCGAGCAGAGTCTGCAAGTGCACTGGG
GCTCTATTATGCGAGAGCAGTTGGACGCTGTGAGAGAGGTCCAAACTGGT
ATGCTAATCGGACTTAATAAACAAGAGGATTTGGCGCAGGCTGGTGAGAA
TAGCGATAAGTCTAGCAGCACGGGGGGGAGAAACAGTGGATCGAGGAGTG
CTGGTAGTTTAGAACAGGAAAGCTCTGTGGAAGCCACTTTGGATGTCACT
ACGACTGTGGAACTGAAGGACGACCTCGTCAGGAAGAAGAAAGAGGCCCG
TGCACGCCCATCTCTCTTCCAGGGCGTCGGCAGTCGTCGCCAAGCTCGTG
GGAGTCAGGATGACAGTATGGCATTGCAAGCGAAAGACGAAGGGCTCACG
AGGCGTACAAGGAGAAGAATTGCAGTTGGCAACACACGTCTAGGTGAACC
TAGAGCTGCTCACACTAAGGACAGCGCAACAGACCTGTTTCAAGAACTGG
CTTCACTACGAAGCGAATTAGATACGATCACAGGAATACTTAACATATGA
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protein sequence of Gchil3321.t1

>Gchil3321.t1 ID=Gchil3321.t1|Name=Gchil3321.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=800bp
MPLSFTPPLTPPFTLSMSAAPSPPSTPPHSNLLNTYAAHMKSLSAALDTR
AHALRTAEARLESRGSALRAHERALATLERRMRSEMTAFLRDVAARQRQL
SRWEQRAEKGRKLVASITNNKEQLKTTKTALEHKNAQLQLVEKEYAALSQ
SREAITSQIDAAKSELSRLATEARRISEEKIRLETLANRLETLESAVRKR
ERDVDATEAAVVLKSERLASLENFERVVAPLQAFVDEFSALEQREAVSIR
DDVAEGVQIALLALRDMQSRLRALKDARAQLDSLQATLEQREKGLREREL
STRQREHNLDVTEARVSNEQDKLSMQSNQLQDGMRSLDDTRADIDRREEA
IHKRERELMQRETKLNHREAAITQSEKTLSRRERSLRRAHAAVTERETLI
DKREREVETERANFNNMKRSIDLREAMLETRELELVAREASLPDNSRPLF
SDNSATNNRQPPGFERDAQLDVPKTGDIIGEEVTREHSVSEEGGKDDIAK
VTLSRKQPPLRTVRRQLEFESINRRLPNHSQKDAQPTDRDEDDNESEVAA
EQLLPELVSARALWKERILRLEIVVRNMRENTWGLKAHVRPVLNAVAERL
GSVRTEIEETPLQHSAGSAKRDYATEQSLQVHWGSIMREQLDAVREVQTG
MLIGLNKQEDLAQAGENSDKSSSTGGRNSGSRSAGSLEQESSVEATLDVT
TTVELKDDLVRKKKEARARPSLFQGVGSRRQARGSQDDSMALQAKDEGLT
RRTRRRIAVGNTRLGEPRAAHTKDSATDLFQELASLRSELDTITGILNI*
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mRNA from alignment at tig00000168_pilon:130381..132780-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil3321.t1 ID=Gchil3321.t1|Name=Gchil3321.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2400bp|location=Sequence derived from alignment at tig00000168_pilon:130381..132780- (Gracilaria chilensis NLEC103_M9 male)
ATGCCACTGTCTTTCACGCCGCCGCTCACGCCGCCGTTCACGCTATCCAT
GTCGGCTGCGCCTTCTCCGCCCTCTACCCCGCCGCACAGCAACCTGCTCA
ACACTTACGCCGCCCACATGAAGAGTCTTTCCGCCGCGCTCGACACACGC
GCACACGCCTTGCGGACTGCGGAGGCACGGTTGGAGAGCCGCGGCAGCGC
CCTCCGCGCCCACGAGAGGGCTTTGGCCACGCTCGAACGTCGAATGAGGT
CTGAGATGACTGCGTTTCTTCGCGATGTCGCTGCGAGGCAAAGGCAGCTG
TCGCGCTGGGAGCAGCGCGCTGAGAAGGGCAGAAAGCTTGTCGCTTCTAT
TACAAACAATAAGGAGCAATTGAAGACCACTAAAACAGCCCTCGAACATA
AGAATGCCCAGCTTCAGCTAGTGGAGAAGGAGTATGCCGCGCTGTCTCAA
TCTCGCGAAGCCATTACTTCTCAGATTGACGCCGCCAAATCAGAGCTTAG
CAGGTTAGCCACAGAGGCTCGACGTATTTCCGAAGAAAAGATTCGCCTCG
AAACTCTTGCTAACCGTCTTGAAACGCTTGAGAGTGCAGTCAGGAAACGA
GAGCGCGATGTTGATGCCACCGAGGCTGCTGTTGTCCTTAAGTCGGAGCG
CTTGGCCTCTCTCGAGAACTTTGAGCGCGTTGTTGCACCGCTTCAGGCAT
TTGTTGATGAATTTTCTGCCTTGGAACAAAGGGAAGCTGTTTCGATACGC
GATGATGTCGCTGAGGGCGTTCAGATTGCCCTTTTGGCTCTGCGTGATAT
GCAATCCAGATTACGGGCTTTGAAGGATGCGCGCGCTCAATTGGATTCGT
TGCAAGCTACTCTTGAACAAAGGGAAAAGGGTTTGAGAGAAAGAGAGCTT
TCTACAAGACAAAGAGAACATAATTTGGATGTCACTGAAGCTAGAGTTTC
TAATGAACAGGATAAACTATCTATGCAGAGTAATCAATTGCAGGATGGAA
TGCGTTCTCTTGATGATACTCGTGCGGATATCGATCGACGGGAAGAGGCA
ATTCACAAAAGGGAACGCGAGTTAATGCAGAGAGAGACGAAACTGAACCA
TCGTGAAGCGGCTATCACCCAATCTGAAAAAACTCTCTCGAGGAGGGAGC
GTTCTCTTCGTCGAGCTCATGCCGCTGTCACAGAACGAGAAACGCTCATC
GATAAGCGTGAGCGGGAAGTCGAAACCGAACGCGCCAATTTTAACAACAT
GAAGCGTTCTATAGATCTTCGTGAGGCCATGTTGGAGACAAGGGAACTTG
AACTCGTGGCGAGGGAAGCATCGTTACCGGATAATTCACGCCCGTTATTC
TCTGACAATTCTGCAACGAACAATCGGCAGCCGCCAGGGTTTGAACGTGA
TGCGCAGTTGGATGTTCCAAAGACTGGTGATATAATTGGTGAGGAGGTTA
CAAGAGAGCACTCGGTGAGCGAAGAAGGCGGAAAGGATGACATTGCAAAA
GTGACATTATCTCGAAAGCAGCCGCCTCTGCGAACTGTTCGACGCCAGTT
AGAGTTTGAGTCAATTAATAGAAGGCTTCCTAACCATAGCCAAAAAGACG
CGCAACCGACTGATCGCGATGAGGATGACAACGAGAGTGAAGTAGCGGCC
GAGCAGTTGCTACCAGAACTTGTGAGTGCTAGAGCACTATGGAAGGAACG
TATATTGAGACTGGAAATAGTTGTGCGAAACATGCGCGAAAATACATGGG
GATTGAAAGCTCATGTACGTCCCGTGCTGAATGCAGTGGCAGAAAGACTC
GGTTCCGTGAGAACAGAAATCGAAGAGACCCCATTGCAGCATTCTGCGGG
GAGTGCAAAGCGTGATTACGCGACCGAGCAGAGTCTGCAAGTGCACTGGG
GCTCTATTATGCGAGAGCAGTTGGACGCTGTGAGAGAGGTCCAAACTGGT
ATGCTAATCGGACTTAATAAACAAGAGGATTTGGCGCAGGCTGGTGAGAA
TAGCGATAAGTCTAGCAGCACGGGGGGGAGAAACAGTGGATCGAGGAGTG
CTGGTAGTTTAGAACAGGAAAGCTCTGTGGAAGCCACTTTGGATGTCACT
ACGACTGTGGAACTGAAGGACGACCTCGTCAGGAAGAAGAAAGAGGCCCG
TGCACGCCCATCTCTCTTCCAGGGCGTCGGCAGTCGTCGCCAAGCTCGTG
GGAGTCAGGATGACAGTATGGCATTGCAAGCGAAAGACGAAGGGCTCACG
AGGCGTACAAGGAGAAGAATTGCAGTTGGCAACACACGTCTAGGTGAACC
TAGAGCTGCTCACACTAAGGACAGCGCAACAGACCTGTTTCAAGAACTGG
CTTCACTACGAAGCGAATTAGATACGATCACAGGAATACTTAACATATGA
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Coding sequence (CDS) from alignment at tig00000168_pilon:130381..132780-

>Gchil3321.t1 ID=Gchil3321.t1|Name=Gchil3321.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2400bp|location=Sequence derived from alignment at tig00000168_pilon:130381..132780- (Gracilaria chilensis NLEC103_M9 male)
ATGCCACTGTCTTTCACGCCGCCGCTCACGCCGCCGTTCACGCTATCCAT
GTCGGCTGCGCCTTCTCCGCCCTCTACCCCGCCGCACAGCAACCTGCTCA
ACACTTACGCCGCCCACATGAAGAGTCTTTCCGCCGCGCTCGACACACGC
GCACACGCCTTGCGGACTGCGGAGGCACGGTTGGAGAGCCGCGGCAGCGC
CCTCCGCGCCCACGAGAGGGCTTTGGCCACGCTCGAACGTCGAATGAGGT
CTGAGATGACTGCGTTTCTTCGCGATGTCGCTGCGAGGCAAAGGCAGCTG
TCGCGCTGGGAGCAGCGCGCTGAGAAGGGCAGAAAGCTTGTCGCTTCTAT
TACAAACAATAAGGAGCAATTGAAGACCACTAAAACAGCCCTCGAACATA
AGAATGCCCAGCTTCAGCTAGTGGAGAAGGAGTATGCCGCGCTGTCTCAA
TCTCGCGAAGCCATTACTTCTCAGATTGACGCCGCCAAATCAGAGCTTAG
CAGGTTAGCCACAGAGGCTCGACGTATTTCCGAAGAAAAGATTCGCCTCG
AAACTCTTGCTAACCGTCTTGAAACGCTTGAGAGTGCAGTCAGGAAACGA
GAGCGCGATGTTGATGCCACCGAGGCTGCTGTTGTCCTTAAGTCGGAGCG
CTTGGCCTCTCTCGAGAACTTTGAGCGCGTTGTTGCACCGCTTCAGGCAT
TTGTTGATGAATTTTCTGCCTTGGAACAAAGGGAAGCTGTTTCGATACGC
GATGATGTCGCTGAGGGCGTTCAGATTGCCCTTTTGGCTCTGCGTGATAT
GCAATCCAGATTACGGGCTTTGAAGGATGCGCGCGCTCAATTGGATTCGT
TGCAAGCTACTCTTGAACAAAGGGAAAAGGGTTTGAGAGAAAGAGAGCTT
TCTACAAGACAAAGAGAACATAATTTGGATGTCACTGAAGCTAGAGTTTC
TAATGAACAGGATAAACTATCTATGCAGAGTAATCAATTGCAGGATGGAA
TGCGTTCTCTTGATGATACTCGTGCGGATATCGATCGACGGGAAGAGGCA
ATTCACAAAAGGGAACGCGAGTTAATGCAGAGAGAGACGAAACTGAACCA
TCGTGAAGCGGCTATCACCCAATCTGAAAAAACTCTCTCGAGGAGGGAGC
GTTCTCTTCGTCGAGCTCATGCCGCTGTCACAGAACGAGAAACGCTCATC
GATAAGCGTGAGCGGGAAGTCGAAACCGAACGCGCCAATTTTAACAACAT
GAAGCGTTCTATAGATCTTCGTGAGGCCATGTTGGAGACAAGGGAACTTG
AACTCGTGGCGAGGGAAGCATCGTTACCGGATAATTCACGCCCGTTATTC
TCTGACAATTCTGCAACGAACAATCGGCAGCCGCCAGGGTTTGAACGTGA
TGCGCAGTTGGATGTTCCAAAGACTGGTGATATAATTGGTGAGGAGGTTA
CAAGAGAGCACTCGGTGAGCGAAGAAGGCGGAAAGGATGACATTGCAAAA
GTGACATTATCTCGAAAGCAGCCGCCTCTGCGAACTGTTCGACGCCAGTT
AGAGTTTGAGTCAATTAATAGAAGGCTTCCTAACCATAGCCAAAAAGACG
CGCAACCGACTGATCGCGATGAGGATGACAACGAGAGTGAAGTAGCGGCC
GAGCAGTTGCTACCAGAACTTGTGAGTGCTAGAGCACTATGGAAGGAACG
TATATTGAGACTGGAAATAGTTGTGCGAAACATGCGCGAAAATACATGGG
GATTGAAAGCTCATGTACGTCCCGTGCTGAATGCAGTGGCAGAAAGACTC
GGTTCCGTGAGAACAGAAATCGAAGAGACCCCATTGCAGCATTCTGCGGG
GAGTGCAAAGCGTGATTACGCGACCGAGCAGAGTCTGCAAGTGCACTGGG
GCTCTATTATGCGAGAGCAGTTGGACGCTGTGAGAGAGGTCCAAACTGGT
ATGCTAATCGGACTTAATAAACAAGAGGATTTGGCGCAGGCTGGTGAGAA
TAGCGATAAGTCTAGCAGCACGGGGGGGAGAAACAGTGGATCGAGGAGTG
CTGGTAGTTTAGAACAGGAAAGCTCTGTGGAAGCCACTTTGGATGTCACT
ACGACTGTGGAACTGAAGGACGACCTCGTCAGGAAGAAGAAAGAGGCCCG
TGCACGCCCATCTCTCTTCCAGGGCGTCGGCAGTCGTCGCCAAGCTCGTG
GGAGTCAGGATGACAGTATGGCATTGCAAGCGAAAGACGAAGGGCTCACG
AGGCGTACAAGGAGAAGAATTGCAGTTGGCAACACACGTCTAGGTGAACC
TAGAGCTGCTCACACTAAGGACAGCGCAACAGACCTGTTTCAAGAACTGG
CTTCACTACGAAGCGAATTAGATACGATCACAGGAATACTTAACATATGA
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