Gchil3202.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gchil3202.t1
Unique Name	Gchil3202.t1
Type	mRNA
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	452

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004382_pilon	contig	tig00004382_pilon:887729..889084 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	45157.CMK131CT
Preferred name	ENOL
PFAMs	Enolase_C,Enolase_N
Max annot lvl	2759\|Eukaryota
KEGG rclass	RC00349
KEGG ko	ko:K01689
KEGG Reaction	R00658
KEGG Pathway	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066
KEGG Module	M00001,M00002,M00003,M00346,M00394
GOs	GO:0003674,GO:0003824,GO:0004634,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009987,GO:0016020,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576
Evalue	1.11e-174
EggNOG OGs	COG0148@1\|root,KOG2670@2759\|Eukaryota
EC	4.2.1.11
Description	phosphopyruvate hydratase activity
COG category	G
BRITE	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil3202	Gchil3202	Gracilaria chilensis NLEC103_M9 male	gene	tig00004382_pilon 887729..889084 -

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil3202.t1.stop1	Gchil3202.t1.stop1	Gracilaria chilensis NLEC103_M9 male	stop_codon	tig00004382_pilon 887729..887731 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil3202.t1.CDS1	Gchil3202.t1.CDS1	Gracilaria chilensis NLEC103_M9 male	CDS	tig00004382_pilon 887729..889084 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil3202.t1.exon1	Gchil3202.t1.exon1	Gracilaria chilensis NLEC103_M9 male	exon	tig00004382_pilon 887729..889084 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil3202.t1.start1	Gchil3202.t1.start1	Gracilaria chilensis NLEC103_M9 male	start_codon	tig00004382_pilon 889082..889084 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil3202.t1	Gchil3202.t1	Gracilaria chilensis NLEC103_M9 male	polypeptide	tig00004382_pilon 887729..889084 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00004382_pilon:887729..889084-
coding sequence from alignment at tig00004382_pilon:887729..889084-

mRNA sequence

>Gchil3202.t1 ID=Gchil3202.t1|Name=Gchil3202.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=452bp
MSRIKDVRGRQLFDSLGNPTLEVEVETDDGCFRAIVPSGSCNGPNEAHEL
RDGDESVLCGKGVSKAIKNVNNELAVAVIGMDPTDQEGIDQALIDCDGSD
DGSKSRLGANSILGVSMAVSRAGAAKKGIPLYKHLNNLAGNPNIILPVPC
FNMLSGGSRAGNGLSIQEFMIMPTGAESFKHAMRIGVEIYHKLKQMVAEQ
YGKGATAVDEEGGFAPDMDENEEAFKLLKKAIEETGYDDLVQIGVDVAAS
DFYDKPSGKYNLDFKQTEKETAAGKMKTANDMLRMYKVYAANYGVISIED
PFYKDDFAPYGKITGELGELIQIIGDEFLTTNLERLENAIEQSTCNALLL
KLNQIGTVTEAIEANNLARNAGFGVMVSHRVGETEDPFIAALCAGLGTGQ
IKAGAPCRSERLAKYNELIRIEEDLGDCAAFAGDYWRDPWMMENSRNPAY
M*

spliced messenger RNA

>Gchil3202.t1 ID=Gchil3202.t1|Name=Gchil3202.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1356bp|location=Sequence derived from alignment at tig00004382_pilon:887729..889084- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTCGAATCAAAGATGTTCGTGGTCGCCAACTTTTTGATTCCCTGGG
CAATCCCACCCTTGAGGTTGAGGTAGAGACTGACGATGGCTGCTTTCGTG
CCATCGTACCATCTGGTTCGTGTAATGGTCCAAACGAAGCACACGAGCTA
AGGGATGGTGATGAGAGCGTTCTTTGCGGAAAAGGTGTATCGAAAGCGAT
CAAGAATGTCAATAATGAGCTCGCCGTAGCCGTTATTGGAATGGATCCGA
CAGATCAGGAAGGAATAGACCAGGCTTTAATTGATTGCGACGGCAGTGAC
GACGGATCAAAGAGCCGTCTAGGCGCCAACTCAATCCTAGGTGTCTCCAT
GGCCGTTTCTCGCGCCGGGGCTGCCAAAAAAGGTATACCTCTTTATAAGC
ACCTCAACAACCTCGCTGGAAACCCGAATATCATTCTACCAGTTCCTTGC
TTCAATATGTTGAGTGGTGGTTCGCGCGCTGGCAACGGGCTTAGCATCCA
GGAATTTATGATCATGCCAACAGGGGCGGAGTCATTTAAACATGCAATGA
GAATCGGAGTAGAAATTTATCATAAGTTGAAACAAATGGTTGCTGAACAA
TATGGAAAGGGGGCAACCGCTGTAGATGAAGAAGGAGGTTTTGCTCCTGA
TATGGATGAGAACGAAGAAGCTTTTAAATTACTAAAGAAAGCTATAGAAG
AAACCGGGTACGACGACCTTGTTCAAATTGGTGTCGATGTTGCAGCAAGT
GACTTTTACGACAAGCCATCGGGGAAGTACAATCTAGATTTCAAGCAAAC
GGAAAAGGAAACCGCAGCGGGGAAAATGAAGACAGCAAATGATATGCTAC
GAATGTACAAAGTATACGCTGCGAACTATGGGGTCATTTCAATCGAAGAT
CCCTTCTACAAAGACGACTTTGCCCCATACGGGAAAATAACTGGGGAGTT
GGGAGAGCTTATCCAGATTATCGGTGATGAATTCCTTACTACTAACCTTG
AAAGGCTTGAAAATGCAATTGAACAAAGCACATGCAACGCTCTTCTCTTG
AAACTAAATCAAATCGGCACAGTAACGGAGGCAATCGAAGCAAATAACCT
TGCTCGAAACGCAGGTTTTGGTGTGATGGTGAGTCATCGTGTCGGAGAAA
CGGAAGATCCATTTATTGCCGCGCTTTGCGCGGGACTAGGAACTGGCCAG
ATAAAAGCAGGGGCTCCTTGCCGTTCCGAAAGGCTGGCAAAGTACAATGA
GTTAATTCGGATAGAAGAGGACTTGGGGGATTGTGCTGCATTCGCTGGGG
ACTACTGGAGGGACCCGTGGATGATGGAAAATTCTCGAAACCCGGCGTAC
ATGTGA

protein sequence of Gchil3202.t1

>Gchil3202.t1 ID=Gchil3202.t1|Name=Gchil3202.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=452bp
MSRIKDVRGRQLFDSLGNPTLEVEVETDDGCFRAIVPSGSCNGPNEAHEL
RDGDESVLCGKGVSKAIKNVNNELAVAVIGMDPTDQEGIDQALIDCDGSD
DGSKSRLGANSILGVSMAVSRAGAAKKGIPLYKHLNNLAGNPNIILPVPC
FNMLSGGSRAGNGLSIQEFMIMPTGAESFKHAMRIGVEIYHKLKQMVAEQ
YGKGATAVDEEGGFAPDMDENEEAFKLLKKAIEETGYDDLVQIGVDVAAS
DFYDKPSGKYNLDFKQTEKETAAGKMKTANDMLRMYKVYAANYGVISIED
PFYKDDFAPYGKITGELGELIQIIGDEFLTTNLERLENAIEQSTCNALLL
KLNQIGTVTEAIEANNLARNAGFGVMVSHRVGETEDPFIAALCAGLGTGQ
IKAGAPCRSERLAKYNELIRIEEDLGDCAAFAGDYWRDPWMMENSRNPAY
M*

mRNA from alignment at tig00004382_pilon:887729..889084-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gchil3202.t1 ID=Gchil3202.t1|Name=Gchil3202.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1356bp|location=Sequence derived from alignment at tig00004382_pilon:887729..889084- (Gracilaria chilensis NLEC103_M9 male)
ATGTCTCGAATCAAAGATGTTCGTGGTCGCCAACTTTTTGATTCCCTGGG
CAATCCCACCCTTGAGGTTGAGGTAGAGACTGACGATGGCTGCTTTCGTG
CCATCGTACCATCTGGTTCGTGTAATGGTCCAAACGAAGCACACGAGCTA
AGGGATGGTGATGAGAGCGTTCTTTGCGGAAAAGGTGTATCGAAAGCGAT
CAAGAATGTCAATAATGAGCTCGCCGTAGCCGTTATTGGAATGGATCCGA
CAGATCAGGAAGGAATAGACCAGGCTTTAATTGATTGCGACGGCAGTGAC
GACGGATCAAAGAGCCGTCTAGGCGCCAACTCAATCCTAGGTGTCTCCAT
GGCCGTTTCTCGCGCCGGGGCTGCCAAAAAAGGTATACCTCTTTATAAGC
ACCTCAACAACCTCGCTGGAAACCCGAATATCATTCTACCAGTTCCTTGC
TTCAATATGTTGAGTGGTGGTTCGCGCGCTGGCAACGGGCTTAGCATCCA
GGAATTTATGATCATGCCAACAGGGGCGGAGTCATTTAAACATGCAATGA
GAATCGGAGTAGAAATTTATCATAAGTTGAAACAAATGGTTGCTGAACAA
TATGGAAAGGGGGCAACCGCTGTAGATGAAGAAGGAGGTTTTGCTCCTGA
TATGGATGAGAACGAAGAAGCTTTTAAATTACTAAAGAAAGCTATAGAAG
AAACCGGGTACGACGACCTTGTTCAAATTGGTGTCGATGTTGCAGCAAGT
GACTTTTACGACAAGCCATCGGGGAAGTACAATCTAGATTTCAAGCAAAC
GGAAAAGGAAACCGCAGCGGGGAAAATGAAGACAGCAAATGATATGCTAC
GAATGTACAAAGTATACGCTGCGAACTATGGGGTCATTTCAATCGAAGAT
CCCTTCTACAAAGACGACTTTGCCCCATACGGGAAAATAACTGGGGAGTT
GGGAGAGCTTATCCAGATTATCGGTGATGAATTCCTTACTACTAACCTTG
AAAGGCTTGAAAATGCAATTGAACAAAGCACATGCAACGCTCTTCTCTTG
AAACTAAATCAAATCGGCACAGTAACGGAGGCAATCGAAGCAAATAACCT
TGCTCGAAACGCAGGTTTTGGTGTGATGGTGAGTCATCGTGTCGGAGAAA
CGGAAGATCCATTTATTGCCGCGCTTTGCGCGGGACTAGGAACTGGCCAG
ATAAAAGCAGGGGCTCCTTGCCGTTCCGAAAGGCTGGCAAAGTACAATGA
GTTAATTCGGATAGAAGAGGACTTGGGGGATTGTGCTGCATTCGCTGGGG
ACTACTGGAGGGACCCGTGGATGATGGAAAATTCTCGAAACCCGGCGTAC
ATGTGA

Coding sequence (CDS) from alignment at tig00004382_pilon:887729..889084-

>Gchil3202.t1 ID=Gchil3202.t1|Name=Gchil3202.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1356bp|location=Sequence derived from alignment at tig00004382_pilon:887729..889084- (Gracilaria chilensis NLEC103_M9 male)
ATGTCTCGAATCAAAGATGTTCGTGGTCGCCAACTTTTTGATTCCCTGGG
CAATCCCACCCTTGAGGTTGAGGTAGAGACTGACGATGGCTGCTTTCGTG
CCATCGTACCATCTGGTTCGTGTAATGGTCCAAACGAAGCACACGAGCTA
AGGGATGGTGATGAGAGCGTTCTTTGCGGAAAAGGTGTATCGAAAGCGAT
CAAGAATGTCAATAATGAGCTCGCCGTAGCCGTTATTGGAATGGATCCGA
CAGATCAGGAAGGAATAGACCAGGCTTTAATTGATTGCGACGGCAGTGAC
GACGGATCAAAGAGCCGTCTAGGCGCCAACTCAATCCTAGGTGTCTCCAT
GGCCGTTTCTCGCGCCGGGGCTGCCAAAAAAGGTATACCTCTTTATAAGC
ACCTCAACAACCTCGCTGGAAACCCGAATATCATTCTACCAGTTCCTTGC
TTCAATATGTTGAGTGGTGGTTCGCGCGCTGGCAACGGGCTTAGCATCCA
GGAATTTATGATCATGCCAACAGGGGCGGAGTCATTTAAACATGCAATGA
GAATCGGAGTAGAAATTTATCATAAGTTGAAACAAATGGTTGCTGAACAA
TATGGAAAGGGGGCAACCGCTGTAGATGAAGAAGGAGGTTTTGCTCCTGA
TATGGATGAGAACGAAGAAGCTTTTAAATTACTAAAGAAAGCTATAGAAG
AAACCGGGTACGACGACCTTGTTCAAATTGGTGTCGATGTTGCAGCAAGT
GACTTTTACGACAAGCCATCGGGGAAGTACAATCTAGATTTCAAGCAAAC
GGAAAAGGAAACCGCAGCGGGGAAAATGAAGACAGCAAATGATATGCTAC
GAATGTACAAAGTATACGCTGCGAACTATGGGGTCATTTCAATCGAAGAT
CCCTTCTACAAAGACGACTTTGCCCCATACGGGAAAATAACTGGGGAGTT
GGGAGAGCTTATCCAGATTATCGGTGATGAATTCCTTACTACTAACCTTG
AAAGGCTTGAAAATGCAATTGAACAAAGCACATGCAACGCTCTTCTCTTG
AAACTAAATCAAATCGGCACAGTAACGGAGGCAATCGAAGCAAATAACCT
TGCTCGAAACGCAGGTTTTGGTGTGATGGTGAGTCATCGTGTCGGAGAAA
CGGAAGATCCATTTATTGCCGCGCTTTGCGCGGGACTAGGAACTGGCCAG
ATAAAAGCAGGGGCTCCTTGCCGTTCCGAAAGGCTGGCAAAGTACAATGA
GTTAATTCGGATAGAAGAGGACTTGGGGGATTGTGCTGCATTCGCTGGGG
ACTACTGGAGGGACCCGTGGATGATGGAAAATTCTCGAAACCCGGCGTAC
ATGTGA