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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2711.XP_006479003.1 |
| PFAMs | JmjC,JmjN,zf-C5HC2 |
| Max annot lvl | 35493|Streptophyta |
| KEGG ko | ko:K11446 |
| GOs | GO:0000003,GO:0000902,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006325,GO:0006464,GO:0006482,GO:0006807,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0008214,GO:0009653,GO:0009719,GO:0009725,GO:0009741,GO:0009791,GO:0009826,GO:0009892,GO:0009987,GO:0010033,GO:0010228,GO:0010605,GO:0010639,GO:0014070,GO:0016043,GO:0016049,GO:0016569,GO:0016570,GO:0016577,GO:0019222,GO:0019538,GO:0022414,GO:0031056,GO:0031057,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032989,GO:0033043,GO:0033044,GO:0033169,GO:0033993,GO:0035065,GO:0035067,GO:0036211,GO:0040007,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0048366,GO:0048367,GO:0048519,GO:0048523,GO:0048589,GO:0048608,GO:0048731,GO:0048827,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051276,GO:0060255,GO:0060560,GO:0061458,GO:0065007,GO:0070076,GO:0070988,GO:0071704,GO:0071840,GO:0080090,GO:0099402,GO:1901564,GO:1901700,GO:1901983,GO:1901984,GO:1902275,GO:1905268,GO:2000756,GO:2000757,GO:2001251 |
| Evalue | 7.35e-40 |
| EggNOG OGs | COG0055@1|root,KOG1246@2759|Eukaryota,37Q2B@33090|Viridiplantae,3GAN5@35493|Streptophyta |
| Description | lysine-specific demethylase |
| COG category | K |
| BRITE | ko00000,ko01000,ko01009,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil3194.t1 ID=Gchil3194.t1|Name=Gchil3194.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=805bp MNYSTVQDAPIIHPTLEEMGNFAELTARASDMAMRHGAVLINPPPEWCPP PMRMRPSSRFFVRTQVLPEAPFVDPEFLRNLSTTSHRETKRRRRPSYNQH EKPSPLQTETQQVSCERSLTSKFAPKIPSPSRKECDRMTCTSFPDERSTD PKTDATHTGYQQKDIKPITNLNSDNVVTAPRIEGIHPVERRSDSKHSVAI ANNDDCASRYIPGAEAIEEEVIVEDVEDAGLQKPSIKKPARSSRKRKSIQ SNVFVFNQDSEGRLTKPITFSYSETPISLQTFKERAQTNINDLHRKLSLD EKWCSEIVETGNGWRKDIKHLEKIFWHSMRKGLDGKPLCVDYGVDVEAEG AFDTQDMSYAEWYGSLGKQVPTVPQKRANPDPQFVRRPTEDSRLVASRHV GNVNEDSLLRHLPNMPGINHSMYYVGQLFTRFCWHTEDGFLNSISYLHEG SAEKIWYAIPPQHAPKFEEYAAMKMFSPSLVDENVSGQALLMNKTTMFDP KEIARHGIPVYRVTHRPRTIVVTGPRAYHAGFNCGFNIAEAVNFAHPSWF PLGREASKFARRLLKPLCIPWEYLLYHEARSMQASLLPYAREGKLLQRMR THAAIVARELRRVMIEGEKTISQYAEEKNLRIKMLNDISVVVKNCQVGPE YGPGAGIVCTLCGHACHFYAAVCGCCEGGEEARCPEHFGFSRVCDKKGHN SVLVRRHDPIMLLDLLDDLEEIGGVGASAEDRLKRYKGFLRPWQTPLRKS GLRLRIDLLRAMSCNGPKPKRKKDGATRERKKKSRSRDAKHVHFEADEFA QHVT* back to topspliced messenger RNA >Gchil3194.t1 ID=Gchil3194.t1|Name=Gchil3194.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2415bp|location=Sequence derived from alignment at tig00004382_pilon:781178..783592- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGAATTACTCAACCGTTCAAGACGCGCCTATCATCCATCCCACCTTGGA GGAGATGGGCAACTTTGCAGAGCTCACAGCGCGAGCTTCGGATATGGCCA TGCGACACGGGGCTGTACTTATCAACCCGCCCCCAGAATGGTGTCCTCCT CCTATGAGGATGCGTCCATCTTCTCGCTTTTTTGTGCGCACACAAGTTCT TCCAGAAGCCCCATTCGTTGATCCAGAGTTCCTTCGCAATCTATCTACAA CCAGCCATCGTGAAACCAAGCGGCGAAGACGCCCATCCTATAATCAACAT GAGAAACCGTCTCCGCTCCAAACGGAAACGCAGCAGGTGTCGTGCGAGCG GTCCCTCACTTCCAAGTTTGCTCCGAAAATTCCGTCACCGTCTCGAAAAG AGTGTGACAGAATGACGTGCACATCATTTCCGGACGAACGCTCCACCGAC CCGAAAACCGACGCGACGCACACTGGCTATCAACAAAAAGACATAAAACC AATCACTAACTTGAATAGCGACAACGTAGTCACTGCTCCGCGCATCGAGG GAATACATCCCGTTGAGCGGAGAAGCGATTCAAAGCATTCCGTCGCTATT GCTAACAATGATGACTGCGCATCGAGATACATCCCAGGAGCGGAGGCGAT TGAAGAGGAGGTTATTGTGGAAGACGTGGAGGATGCGGGACTACAGAAGC CGTCGATCAAGAAACCAGCGCGATCGTCACGAAAGCGAAAATCAATTCAG TCTAATGTATTTGTGTTTAACCAGGATAGCGAGGGGCGGCTAACTAAGCC CATTACGTTCAGTTACTCTGAAACTCCAATTTCGCTTCAGACATTCAAAG AGAGAGCGCAAACGAACATCAACGACCTACACCGCAAGTTGAGCCTGGAT GAGAAATGGTGCTCGGAGATTGTCGAAACTGGTAACGGGTGGAGAAAAGA CATAAAGCATCTAGAGAAGATTTTCTGGCATTCGATGCGAAAGGGCCTTG ATGGTAAACCTCTATGCGTTGATTACGGTGTTGATGTTGAAGCTGAGGGA GCTTTTGACACTCAAGATATGTCATACGCGGAGTGGTATGGTAGTCTAGG TAAGCAGGTGCCTACAGTGCCACAGAAAAGAGCGAACCCGGATCCCCAAT TCGTTCGCCGCCCGACGGAAGATAGTCGTCTCGTCGCCAGTCGTCACGTA GGCAATGTCAACGAAGATAGTCTCTTGCGACATCTCCCCAACATGCCAGG CATTAACCACTCCATGTACTACGTGGGTCAGCTTTTCACCCGTTTTTGTT GGCACACAGAGGATGGCTTCTTGAATTCCATTTCATATTTGCACGAAGGC AGTGCGGAAAAGATTTGGTATGCCATTCCCCCCCAACACGCACCGAAATT TGAAGAATATGCGGCCATGAAGATGTTTTCCCCTTCACTTGTGGATGAGA ATGTATCAGGTCAAGCGTTGCTGATGAACAAAACAACAATGTTTGATCCG AAGGAGATCGCACGCCATGGGATACCCGTATACCGCGTCACACACCGACC AAGAACGATTGTTGTAACAGGACCACGGGCTTACCACGCAGGATTCAATT GTGGTTTCAATATTGCCGAAGCAGTTAATTTTGCTCATCCATCTTGGTTT CCATTGGGAAGGGAGGCTTCGAAATTCGCAAGAAGACTACTGAAACCCTT ATGCATCCCCTGGGAATATCTCCTATATCATGAGGCGAGATCAATGCAAG CATCGTTGCTTCCGTATGCTCGCGAGGGTAAACTGTTGCAACGGATGCGA ACTCACGCCGCAATCGTTGCTCGAGAGTTACGACGCGTCATGATTGAAGG GGAAAAGACAATATCGCAATATGCCGAAGAGAAAAACCTCCGGATCAAAA TGCTTAATGATATTAGTGTGGTCGTGAAGAATTGCCAAGTAGGTCCCGAG TACGGGCCTGGGGCTGGAATTGTATGCACGCTCTGTGGGCACGCATGTCA TTTTTACGCTGCAGTCTGTGGATGTTGCGAAGGAGGTGAAGAAGCTCGAT GCCCAGAGCATTTTGGGTTCTCTAGGGTCTGCGATAAAAAGGGACACAAT TCGGTGTTGGTTCGAAGGCACGATCCAATCATGCTACTCGATTTGCTTGA TGATCTTGAGGAAATTGGAGGCGTGGGGGCTAGCGCAGAAGATCGGCTAA AACGATACAAAGGGTTTCTCCGGCCTTGGCAAACGCCGCTGCGGAAATCT GGCTTGCGTTTGCGGATAGACCTTCTGCGTGCCATGAGCTGCAATGGTCC GAAACCCAAAAGAAAGAAAGATGGGGCAACTCGCGAAAGAAAGAAAAAAT CGCGCTCAAGGGATGCCAAACACGTACACTTTGAAGCGGATGAATTCGCT CAACATGTCACGTGA back to topprotein sequence of Gchil3194.t1 >Gchil3194.t1 ID=Gchil3194.t1|Name=Gchil3194.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=805bp
MNYSTVQDAPIIHPTLEEMGNFAELTARASDMAMRHGAVLINPPPEWCPP PMRMRPSSRFFVRTQVLPEAPFVDPEFLRNLSTTSHRETKRRRRPSYNQH EKPSPLQTETQQVSCERSLTSKFAPKIPSPSRKECDRMTCTSFPDERSTD PKTDATHTGYQQKDIKPITNLNSDNVVTAPRIEGIHPVERRSDSKHSVAI ANNDDCASRYIPGAEAIEEEVIVEDVEDAGLQKPSIKKPARSSRKRKSIQ SNVFVFNQDSEGRLTKPITFSYSETPISLQTFKERAQTNINDLHRKLSLD EKWCSEIVETGNGWRKDIKHLEKIFWHSMRKGLDGKPLCVDYGVDVEAEG AFDTQDMSYAEWYGSLGKQVPTVPQKRANPDPQFVRRPTEDSRLVASRHV GNVNEDSLLRHLPNMPGINHSMYYVGQLFTRFCWHTEDGFLNSISYLHEG SAEKIWYAIPPQHAPKFEEYAAMKMFSPSLVDENVSGQALLMNKTTMFDP KEIARHGIPVYRVTHRPRTIVVTGPRAYHAGFNCGFNIAEAVNFAHPSWF PLGREASKFARRLLKPLCIPWEYLLYHEARSMQASLLPYAREGKLLQRMR THAAIVARELRRVMIEGEKTISQYAEEKNLRIKMLNDISVVVKNCQVGPE YGPGAGIVCTLCGHACHFYAAVCGCCEGGEEARCPEHFGFSRVCDKKGHN SVLVRRHDPIMLLDLLDDLEEIGGVGASAEDRLKRYKGFLRPWQTPLRKS GLRLRIDLLRAMSCNGPKPKRKKDGATRERKKKSRSRDAKHVHFEADEFA QHVT* back to topmRNA from alignment at tig00004382_pilon:781178..783592- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil3194.t1 ID=Gchil3194.t1|Name=Gchil3194.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2415bp|location=Sequence derived from alignment at tig00004382_pilon:781178..783592- (Gracilaria chilensis NLEC103_M9 male) ATGAATTACTCAACCGTTCAAGACGCGCCTATCATCCATCCCACCTTGGA
GGAGATGGGCAACTTTGCAGAGCTCACAGCGCGAGCTTCGGATATGGCCA
TGCGACACGGGGCTGTACTTATCAACCCGCCCCCAGAATGGTGTCCTCCT
CCTATGAGGATGCGTCCATCTTCTCGCTTTTTTGTGCGCACACAAGTTCT
TCCAGAAGCCCCATTCGTTGATCCAGAGTTCCTTCGCAATCTATCTACAA
CCAGCCATCGTGAAACCAAGCGGCGAAGACGCCCATCCTATAATCAACAT
GAGAAACCGTCTCCGCTCCAAACGGAAACGCAGCAGGTGTCGTGCGAGCG
GTCCCTCACTTCCAAGTTTGCTCCGAAAATTCCGTCACCGTCTCGAAAAG
AGTGTGACAGAATGACGTGCACATCATTTCCGGACGAACGCTCCACCGAC
CCGAAAACCGACGCGACGCACACTGGCTATCAACAAAAAGACATAAAACC
AATCACTAACTTGAATAGCGACAACGTAGTCACTGCTCCGCGCATCGAGG
GAATACATCCCGTTGAGCGGAGAAGCGATTCAAAGCATTCCGTCGCTATT
GCTAACAATGATGACTGCGCATCGAGATACATCCCAGGAGCGGAGGCGAT
TGAAGAGGAGGTTATTGTGGAAGACGTGGAGGATGCGGGACTACAGAAGC
CGTCGATCAAGAAACCAGCGCGATCGTCACGAAAGCGAAAATCAATTCAG
TCTAATGTATTTGTGTTTAACCAGGATAGCGAGGGGCGGCTAACTAAGCC
CATTACGTTCAGTTACTCTGAAACTCCAATTTCGCTTCAGACATTCAAAG
AGAGAGCGCAAACGAACATCAACGACCTACACCGCAAGTTGAGCCTGGAT
GAGAAATGGTGCTCGGAGATTGTCGAAACTGGTAACGGGTGGAGAAAAGA
CATAAAGCATCTAGAGAAGATTTTCTGGCATTCGATGCGAAAGGGCCTTG
ATGGTAAACCTCTATGCGTTGATTACGGTGTTGATGTTGAAGCTGAGGGA
GCTTTTGACACTCAAGATATGTCATACGCGGAGTGGTATGGTAGTCTAGG
TAAGCAGGTGCCTACAGTGCCACAGAAAAGAGCGAACCCGGATCCCCAAT
TCGTTCGCCGCCCGACGGAAGATAGTCGTCTCGTCGCCAGTCGTCACGTA
GGCAATGTCAACGAAGATAGTCTCTTGCGACATCTCCCCAACATGCCAGG
CATTAACCACTCCATGTACTACGTGGGTCAGCTTTTCACCCGTTTTTGTT
GGCACACAGAGGATGGCTTCTTGAATTCCATTTCATATTTGCACGAAGGC
AGTGCGGAAAAGATTTGGTATGCCATTCCCCCCCAACACGCACCGAAATT
TGAAGAATATGCGGCCATGAAGATGTTTTCCCCTTCACTTGTGGATGAGA
ATGTATCAGGTCAAGCGTTGCTGATGAACAAAACAACAATGTTTGATCCG
AAGGAGATCGCACGCCATGGGATACCCGTATACCGCGTCACACACCGACC
AAGAACGATTGTTGTAACAGGACCACGGGCTTACCACGCAGGATTCAATT
GTGGTTTCAATATTGCCGAAGCAGTTAATTTTGCTCATCCATCTTGGTTT
CCATTGGGAAGGGAGGCTTCGAAATTCGCAAGAAGACTACTGAAACCCTT
ATGCATCCCCTGGGAATATCTCCTATATCATGAGGCGAGATCAATGCAAG
CATCGTTGCTTCCGTATGCTCGCGAGGGTAAACTGTTGCAACGGATGCGA
ACTCACGCCGCAATCGTTGCTCGAGAGTTACGACGCGTCATGATTGAAGG
GGAAAAGACAATATCGCAATATGCCGAAGAGAAAAACCTCCGGATCAAAA
TGCTTAATGATATTAGTGTGGTCGTGAAGAATTGCCAAGTAGGTCCCGAG
TACGGGCCTGGGGCTGGAATTGTATGCACGCTCTGTGGGCACGCATGTCA
TTTTTACGCTGCAGTCTGTGGATGTTGCGAAGGAGGTGAAGAAGCTCGAT
GCCCAGAGCATTTTGGGTTCTCTAGGGTCTGCGATAAAAAGGGACACAAT
TCGGTGTTGGTTCGAAGGCACGATCCAATCATGCTACTCGATTTGCTTGA
TGATCTTGAGGAAATTGGAGGCGTGGGGGCTAGCGCAGAAGATCGGCTAA
AACGATACAAAGGGTTTCTCCGGCCTTGGCAAACGCCGCTGCGGAAATCT
GGCTTGCGTTTGCGGATAGACCTTCTGCGTGCCATGAGCTGCAATGGTCC
GAAACCCAAAAGAAAGAAAGATGGGGCAACTCGCGAAAGAAAGAAAAAAT
CGCGCTCAAGGGATGCCAAACACGTACACTTTGAAGCGGATGAATTCGCT
CAACATGTCACGTGA back to topCoding sequence (CDS) from alignment at tig00004382_pilon:781178..783592- >Gchil3194.t1 ID=Gchil3194.t1|Name=Gchil3194.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2415bp|location=Sequence derived from alignment at tig00004382_pilon:781178..783592- (Gracilaria chilensis NLEC103_M9 male) ATGAATTACTCAACCGTTCAAGACGCGCCTATCATCCATCCCACCTTGGA GGAGATGGGCAACTTTGCAGAGCTCACAGCGCGAGCTTCGGATATGGCCA TGCGACACGGGGCTGTACTTATCAACCCGCCCCCAGAATGGTGTCCTCCT CCTATGAGGATGCGTCCATCTTCTCGCTTTTTTGTGCGCACACAAGTTCT TCCAGAAGCCCCATTCGTTGATCCAGAGTTCCTTCGCAATCTATCTACAA CCAGCCATCGTGAAACCAAGCGGCGAAGACGCCCATCCTATAATCAACAT GAGAAACCGTCTCCGCTCCAAACGGAAACGCAGCAGGTGTCGTGCGAGCG GTCCCTCACTTCCAAGTTTGCTCCGAAAATTCCGTCACCGTCTCGAAAAG AGTGTGACAGAATGACGTGCACATCATTTCCGGACGAACGCTCCACCGAC CCGAAAACCGACGCGACGCACACTGGCTATCAACAAAAAGACATAAAACC AATCACTAACTTGAATAGCGACAACGTAGTCACTGCTCCGCGCATCGAGG GAATACATCCCGTTGAGCGGAGAAGCGATTCAAAGCATTCCGTCGCTATT GCTAACAATGATGACTGCGCATCGAGATACATCCCAGGAGCGGAGGCGAT TGAAGAGGAGGTTATTGTGGAAGACGTGGAGGATGCGGGACTACAGAAGC CGTCGATCAAGAAACCAGCGCGATCGTCACGAAAGCGAAAATCAATTCAG TCTAATGTATTTGTGTTTAACCAGGATAGCGAGGGGCGGCTAACTAAGCC CATTACGTTCAGTTACTCTGAAACTCCAATTTCGCTTCAGACATTCAAAG AGAGAGCGCAAACGAACATCAACGACCTACACCGCAAGTTGAGCCTGGAT GAGAAATGGTGCTCGGAGATTGTCGAAACTGGTAACGGGTGGAGAAAAGA CATAAAGCATCTAGAGAAGATTTTCTGGCATTCGATGCGAAAGGGCCTTG ATGGTAAACCTCTATGCGTTGATTACGGTGTTGATGTTGAAGCTGAGGGA GCTTTTGACACTCAAGATATGTCATACGCGGAGTGGTATGGTAGTCTAGG TAAGCAGGTGCCTACAGTGCCACAGAAAAGAGCGAACCCGGATCCCCAAT TCGTTCGCCGCCCGACGGAAGATAGTCGTCTCGTCGCCAGTCGTCACGTA GGCAATGTCAACGAAGATAGTCTCTTGCGACATCTCCCCAACATGCCAGG CATTAACCACTCCATGTACTACGTGGGTCAGCTTTTCACCCGTTTTTGTT GGCACACAGAGGATGGCTTCTTGAATTCCATTTCATATTTGCACGAAGGC AGTGCGGAAAAGATTTGGTATGCCATTCCCCCCCAACACGCACCGAAATT TGAAGAATATGCGGCCATGAAGATGTTTTCCCCTTCACTTGTGGATGAGA ATGTATCAGGTCAAGCGTTGCTGATGAACAAAACAACAATGTTTGATCCG AAGGAGATCGCACGCCATGGGATACCCGTATACCGCGTCACACACCGACC AAGAACGATTGTTGTAACAGGACCACGGGCTTACCACGCAGGATTCAATT GTGGTTTCAATATTGCCGAAGCAGTTAATTTTGCTCATCCATCTTGGTTT CCATTGGGAAGGGAGGCTTCGAAATTCGCAAGAAGACTACTGAAACCCTT ATGCATCCCCTGGGAATATCTCCTATATCATGAGGCGAGATCAATGCAAG CATCGTTGCTTCCGTATGCTCGCGAGGGTAAACTGTTGCAACGGATGCGA ACTCACGCCGCAATCGTTGCTCGAGAGTTACGACGCGTCATGATTGAAGG GGAAAAGACAATATCGCAATATGCCGAAGAGAAAAACCTCCGGATCAAAA TGCTTAATGATATTAGTGTGGTCGTGAAGAATTGCCAAGTAGGTCCCGAG TACGGGCCTGGGGCTGGAATTGTATGCACGCTCTGTGGGCACGCATGTCA TTTTTACGCTGCAGTCTGTGGATGTTGCGAAGGAGGTGAAGAAGCTCGAT GCCCAGAGCATTTTGGGTTCTCTAGGGTCTGCGATAAAAAGGGACACAAT TCGGTGTTGGTTCGAAGGCACGATCCAATCATGCTACTCGATTTGCTTGA TGATCTTGAGGAAATTGGAGGCGTGGGGGCTAGCGCAGAAGATCGGCTAA AACGATACAAAGGGTTTCTCCGGCCTTGGCAAACGCCGCTGCGGAAATCT GGCTTGCGTTTGCGGATAGACCTTCTGCGTGCCATGAGCTGCAATGGTCC GAAACCCAAAAGAAAGAAAGATGGGGCAACTCGCGAAAGAAAGAAAAAAT CGCGCTCAAGGGATGCCAAACACGTACACTTTGAAGCGGATGAATTCGCT CAACATGTCACGTGA back to top
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