Gchil3102.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil3102.t1
Unique NameGchil3102.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length462
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:89066..90451 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3102Gchil3102Gracilaria chilensis NLEC103_M9 malegenetig00004382_pilon 89066..90451 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3102.t1.stop1Gchil3102.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004382_pilon 89066..89068 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3102.t1.CDS1Gchil3102.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004382_pilon 89066..90451 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3102.t1.exon1Gchil3102.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004382_pilon 89066..90451 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3102.t1.start1Gchil3102.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004382_pilon 90449..90451 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3102.t1Gchil3102.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004382_pilon 89066..90451 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil3102.t1 ID=Gchil3102.t1|Name=Gchil3102.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=462bp
MPSAFRSGRLAPRDERDRDTKAARHSRRGRGRMAQHHPASRTMDLGKLGR
DEELGIHDGLPAQLRSGGFASFFARLFRKNDYSTRPAARYADMRRADGVA
SSGRLGRHAAASSLGSLQSYATSTIRASSGPIHACLTPASTSEVGIKKRV
FIRKEDESQPVFSCQVRGKTLMSARPERLTYPDFKIKEFGGRDTWYSDVF
VLPHNAIRWEIMDLYTILSSIQRRWFSITLHDIAQLAEYWQTFEVFVAQY
FEIEDQIVFSFMQSAAEQSSEWKKYYMVVHYNRKRLESMLMSVGSTFELF
NTCAHGEVLPKVYQALCDFLPKLLDYMEQQEEVLPNVFRECCEQESRVLL
NRATANFIVRAANGRDGIAILTRWIEDSMILQIWKDENLSARAQSSHRRW
IMNLEASHVEIARRFQRRLRTMPKQNGEQPSGAMEDRVESTRKSASRNSF
KNQARRTLQLY*
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spliced messenger RNA

>Gchil3102.t1 ID=Gchil3102.t1|Name=Gchil3102.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1386bp|location=Sequence derived from alignment at tig00004382_pilon:89066..90451- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCTCTGCCTTCCGTTCCGGCCGCCTGGCGCCGCGCGATGAGCGCGA
TCGAGATACCAAGGCTGCGCGCCACAGCCGACGCGGTCGCGGACGCATGG
CGCAGCATCACCCCGCCTCCCGCACCATGGACCTTGGAAAACTTGGTCGC
GATGAGGAACTCGGAATTCACGACGGCCTGCCCGCGCAGCTCCGTTCCGG
TGGATTTGCTTCGTTTTTCGCCCGCCTCTTCCGCAAGAATGACTACAGTA
CTCGCCCGGCCGCCCGCTACGCCGACATGCGTCGCGCTGACGGTGTCGCA
AGTTCGGGGAGACTTGGACGCCATGCGGCTGCCAGCAGCCTGGGTAGTTT
ACAGAGCTATGCTACTAGCACTATTCGTGCCTCCAGCGGACCTATCCATG
CGTGTCTGACCCCGGCTAGTACCAGTGAGGTGGGTATCAAGAAGCGCGTC
TTTATTAGAAAGGAAGACGAGTCGCAACCGGTGTTTAGCTGTCAAGTTCG
CGGGAAAACTTTGATGTCTGCCAGACCTGAACGCCTCACCTACCCTGATT
TCAAGATCAAGGAGTTTGGCGGCCGCGATACTTGGTACAGTGACGTGTTT
GTTTTACCTCACAATGCTATTCGTTGGGAGATCATGGACCTGTATACCAT
TCTCTCTTCCATCCAGCGTCGATGGTTCTCAATCACTTTGCATGACATTG
CTCAACTAGCTGAATACTGGCAGACGTTCGAGGTTTTTGTTGCACAATAC
TTTGAAATCGAGGACCAGATTGTGTTTTCTTTCATGCAAAGCGCAGCCGA
ACAGTCTTCAGAATGGAAAAAGTACTACATGGTCGTCCATTACAACCGCA
AACGATTGGAGTCCATGTTGATGTCCGTCGGTTCTACCTTTGAGCTCTTC
AACACATGTGCTCACGGTGAGGTTCTTCCCAAAGTATACCAGGCGCTGTG
CGACTTTTTACCAAAGCTGCTCGACTACATGGAGCAGCAAGAAGAGGTCC
TGCCAAACGTATTTCGCGAATGCTGCGAACAGGAATCTAGGGTGCTTCTG
AACCGCGCTACCGCCAATTTCATAGTTCGCGCTGCCAACGGCAGAGATGG
AATAGCCATCCTCACAAGGTGGATCGAAGACTCCATGATTCTACAAATTT
GGAAGGACGAAAATCTCAGCGCTCGCGCCCAGTCCTCACACAGACGATGG
ATCATGAATCTGGAAGCTTCACATGTCGAAATAGCAAGACGCTTTCAGAG
ACGATTGAGAACCATGCCAAAGCAGAATGGCGAGCAGCCATCTGGCGCTA
TGGAGGATCGCGTCGAGTCCACCAGAAAATCTGCTTCTCGCAACTCGTTC
AAAAACCAGGCACGGAGGACGCTTCAGCTCTACTAG
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protein sequence of Gchil3102.t1

>Gchil3102.t1 ID=Gchil3102.t1|Name=Gchil3102.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=462bp
MPSAFRSGRLAPRDERDRDTKAARHSRRGRGRMAQHHPASRTMDLGKLGR
DEELGIHDGLPAQLRSGGFASFFARLFRKNDYSTRPAARYADMRRADGVA
SSGRLGRHAAASSLGSLQSYATSTIRASSGPIHACLTPASTSEVGIKKRV
FIRKEDESQPVFSCQVRGKTLMSARPERLTYPDFKIKEFGGRDTWYSDVF
VLPHNAIRWEIMDLYTILSSIQRRWFSITLHDIAQLAEYWQTFEVFVAQY
FEIEDQIVFSFMQSAAEQSSEWKKYYMVVHYNRKRLESMLMSVGSTFELF
NTCAHGEVLPKVYQALCDFLPKLLDYMEQQEEVLPNVFRECCEQESRVLL
NRATANFIVRAANGRDGIAILTRWIEDSMILQIWKDENLSARAQSSHRRW
IMNLEASHVEIARRFQRRLRTMPKQNGEQPSGAMEDRVESTRKSASRNSF
KNQARRTLQLY*
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mRNA from alignment at tig00004382_pilon:89066..90451-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil3102.t1 ID=Gchil3102.t1|Name=Gchil3102.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1386bp|location=Sequence derived from alignment at tig00004382_pilon:89066..90451- (Gracilaria chilensis NLEC103_M9 male)
ATGCCCTCTGCCTTCCGTTCCGGCCGCCTGGCGCCGCGCGATGAGCGCGA
TCGAGATACCAAGGCTGCGCGCCACAGCCGACGCGGTCGCGGACGCATGG
CGCAGCATCACCCCGCCTCCCGCACCATGGACCTTGGAAAACTTGGTCGC
GATGAGGAACTCGGAATTCACGACGGCCTGCCCGCGCAGCTCCGTTCCGG
TGGATTTGCTTCGTTTTTCGCCCGCCTCTTCCGCAAGAATGACTACAGTA
CTCGCCCGGCCGCCCGCTACGCCGACATGCGTCGCGCTGACGGTGTCGCA
AGTTCGGGGAGACTTGGACGCCATGCGGCTGCCAGCAGCCTGGGTAGTTT
ACAGAGCTATGCTACTAGCACTATTCGTGCCTCCAGCGGACCTATCCATG
CGTGTCTGACCCCGGCTAGTACCAGTGAGGTGGGTATCAAGAAGCGCGTC
TTTATTAGAAAGGAAGACGAGTCGCAACCGGTGTTTAGCTGTCAAGTTCG
CGGGAAAACTTTGATGTCTGCCAGACCTGAACGCCTCACCTACCCTGATT
TCAAGATCAAGGAGTTTGGCGGCCGCGATACTTGGTACAGTGACGTGTTT
GTTTTACCTCACAATGCTATTCGTTGGGAGATCATGGACCTGTATACCAT
TCTCTCTTCCATCCAGCGTCGATGGTTCTCAATCACTTTGCATGACATTG
CTCAACTAGCTGAATACTGGCAGACGTTCGAGGTTTTTGTTGCACAATAC
TTTGAAATCGAGGACCAGATTGTGTTTTCTTTCATGCAAAGCGCAGCCGA
ACAGTCTTCAGAATGGAAAAAGTACTACATGGTCGTCCATTACAACCGCA
AACGATTGGAGTCCATGTTGATGTCCGTCGGTTCTACCTTTGAGCTCTTC
AACACATGTGCTCACGGTGAGGTTCTTCCCAAAGTATACCAGGCGCTGTG
CGACTTTTTACCAAAGCTGCTCGACTACATGGAGCAGCAAGAAGAGGTCC
TGCCAAACGTATTTCGCGAATGCTGCGAACAGGAATCTAGGGTGCTTCTG
AACCGCGCTACCGCCAATTTCATAGTTCGCGCTGCCAACGGCAGAGATGG
AATAGCCATCCTCACAAGGTGGATCGAAGACTCCATGATTCTACAAATTT
GGAAGGACGAAAATCTCAGCGCTCGCGCCCAGTCCTCACACAGACGATGG
ATCATGAATCTGGAAGCTTCACATGTCGAAATAGCAAGACGCTTTCAGAG
ACGATTGAGAACCATGCCAAAGCAGAATGGCGAGCAGCCATCTGGCGCTA
TGGAGGATCGCGTCGAGTCCACCAGAAAATCTGCTTCTCGCAACTCGTTC
AAAAACCAGGCACGGAGGACGCTTCAGCTCTACTAG
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Coding sequence (CDS) from alignment at tig00004382_pilon:89066..90451-

>Gchil3102.t1 ID=Gchil3102.t1|Name=Gchil3102.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1386bp|location=Sequence derived from alignment at tig00004382_pilon:89066..90451- (Gracilaria chilensis NLEC103_M9 male)
ATGCCCTCTGCCTTCCGTTCCGGCCGCCTGGCGCCGCGCGATGAGCGCGA
TCGAGATACCAAGGCTGCGCGCCACAGCCGACGCGGTCGCGGACGCATGG
CGCAGCATCACCCCGCCTCCCGCACCATGGACCTTGGAAAACTTGGTCGC
GATGAGGAACTCGGAATTCACGACGGCCTGCCCGCGCAGCTCCGTTCCGG
TGGATTTGCTTCGTTTTTCGCCCGCCTCTTCCGCAAGAATGACTACAGTA
CTCGCCCGGCCGCCCGCTACGCCGACATGCGTCGCGCTGACGGTGTCGCA
AGTTCGGGGAGACTTGGACGCCATGCGGCTGCCAGCAGCCTGGGTAGTTT
ACAGAGCTATGCTACTAGCACTATTCGTGCCTCCAGCGGACCTATCCATG
CGTGTCTGACCCCGGCTAGTACCAGTGAGGTGGGTATCAAGAAGCGCGTC
TTTATTAGAAAGGAAGACGAGTCGCAACCGGTGTTTAGCTGTCAAGTTCG
CGGGAAAACTTTGATGTCTGCCAGACCTGAACGCCTCACCTACCCTGATT
TCAAGATCAAGGAGTTTGGCGGCCGCGATACTTGGTACAGTGACGTGTTT
GTTTTACCTCACAATGCTATTCGTTGGGAGATCATGGACCTGTATACCAT
TCTCTCTTCCATCCAGCGTCGATGGTTCTCAATCACTTTGCATGACATTG
CTCAACTAGCTGAATACTGGCAGACGTTCGAGGTTTTTGTTGCACAATAC
TTTGAAATCGAGGACCAGATTGTGTTTTCTTTCATGCAAAGCGCAGCCGA
ACAGTCTTCAGAATGGAAAAAGTACTACATGGTCGTCCATTACAACCGCA
AACGATTGGAGTCCATGTTGATGTCCGTCGGTTCTACCTTTGAGCTCTTC
AACACATGTGCTCACGGTGAGGTTCTTCCCAAAGTATACCAGGCGCTGTG
CGACTTTTTACCAAAGCTGCTCGACTACATGGAGCAGCAAGAAGAGGTCC
TGCCAAACGTATTTCGCGAATGCTGCGAACAGGAATCTAGGGTGCTTCTG
AACCGCGCTACCGCCAATTTCATAGTTCGCGCTGCCAACGGCAGAGATGG
AATAGCCATCCTCACAAGGTGGATCGAAGACTCCATGATTCTACAAATTT
GGAAGGACGAAAATCTCAGCGCTCGCGCCCAGTCCTCACACAGACGATGG
ATCATGAATCTGGAAGCTTCACATGTCGAAATAGCAAGACGCTTTCAGAG
ACGATTGAGAACCATGCCAAAGCAGAATGGCGAGCAGCCATCTGGCGCTA
TGGAGGATCGCGTCGAGTCCACCAGAAAATCTGCTTCTCGCAACTCGTTC
AAAAACCAGGCACGGAGGACGCTTCAGCTCTACTAG
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