Gchil2965.t2 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil2965.t2
Unique NameGchil2965.t2
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length929
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:518642..521428 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog45351.EDO38319
Preferred nameMSH2
PFAMsMutS_I,MutS_II,MutS_III,MutS_IV,MutS_V
Max annot lvl33208|Metazoa
KEGG koko:K08735
KEGG Pathwayko01524,ko03430,ko05200,ko05210,map01524,map03430,map05200,map05210
KEGG ModuleM00295
GOsGO:0000003,GO:0000018,GO:0000075,GO:0000077,GO:0000217,GO:0000278,GO:0000400,GO:0000403,GO:0000404,GO:0000406,GO:0001101,GO:0001701,GO:0001775,GO:0002200,GO:0002204,GO:0002208,GO:0002250,GO:0002252,GO:0002263,GO:0002285,GO:0002312,GO:0002366,GO:0002376,GO:0002377,GO:0002381,GO:0002440,GO:0002443,GO:0002449,GO:0002460,GO:0002520,GO:0002521,GO:0002562,GO:0002566,GO:0002637,GO:0002639,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002703,GO:0002705,GO:0002706,GO:0002708,GO:0002712,GO:0002714,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0002889,GO:0002891,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006259,GO:0006281,GO:0006298,GO:0006301,GO:0006302,GO:0006310,GO:0006311,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006955,GO:0006974,GO:0006996,GO:0007049,GO:0007050,GO:0007093,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007346,GO:0007548,GO:0007568,GO:0008022,GO:0008094,GO:0008150,GO:0008152,GO:0008219,GO:0008340,GO:0008406,GO:0008584,GO:0008630,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009790,GO:0009792,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010165,GO:0010212,GO:0010224,GO:0010243,GO:0010259,GO:0010520,GO:0010564,GO:0010604,GO:0010605,GO:0010639,GO:0010941,GO:0010948,GO:0012501,GO:0014070,GO:0016043,GO:0016064,GO:0016310,GO:0016444,GO:0016445,GO:0016446,GO:0016447,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0019219,GO:0019222,GO:0019237,GO:0019637,GO:0019693,GO:0019724,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0023052,GO:0030097,GO:0030098,GO:0030154,GO:0030183,GO:0030983,GO:0031323,GO:0031324,GO:0031325,GO:0031570,GO:0031573,GO:0031974,GO:0031981,GO:0032135,GO:0032137,GO:0032138,GO:0032300,GO:0032301,GO:0032302,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033043,GO:0033554,GO:0034641,GO:0035556,GO:0035822,GO:0036297,GO:0040020,GO:0042113,GO:0042221,GO:0042493,GO:0042623,GO:0042771,GO:0042802,GO:0042803,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043170,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043523,GO:0043524,GO:0043565,GO:0043570,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044703,GO:0044773,GO:0044774,GO:0045128,GO:0045137,GO:0045190,GO:0045191,GO:0045321,GO:0045786,GO:0045830,GO:0045835,GO:0045910,GO:0045911,GO:0045930,GO:0045934,GO:0045935,GO:0046034,GO:0046483,GO:0046546,GO:0046649,GO:0046661,GO:0046983,GO:0048232,GO:0048296,GO:0048298,GO:0048302,GO:0048304,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050864,GO:0050865,GO:0050867,GO:0050871,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051094,GO:0051095,GO:0051096,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051249,GO:0051251,GO:0051276,GO:0051321,GO:0051336,GO:0051345,GO:0051445,GO:0051447,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0055086,GO:0060255,GO:0060548,GO:0060631,GO:0061458,GO:0061982,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0072331,GO:0072332,GO:0072521,GO:0080090,GO:0090304,GO:0097159,GO:0097190,GO:0097193,GO:0110029,GO:1901135,GO:1901214,GO:1901215,GO:1901360,GO:1901363,GO:1901564,GO:1901698,GO:1901700,GO:1903046,GO:1903047,GO:1990391,GO:1990837,GO:2000026,GO:2000241,GO:2000242
Evalue1.03e-187
EggNOG OGsCOG0249@1|root,KOG0219@2759|Eukaryota,38BNJ@33154|Opisthokonta,3BBXU@33208|Metazoa
DescriptionComponent of the post-replicative DNA mismatch repair system (MMR)
COG categoryL
BRITEko00000,ko00001,ko00002,ko03400
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2965Gchil2965Gracilaria chilensis NLEC103_M9 malegenetig00000106_pilon 518642..521428 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2965.t2.stop1Gchil2965.t2.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000106_pilon 518642..518644 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2965.t2.CDS1Gchil2965.t2.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000106_pilon 518642..521428 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2965.t2.exon1Gchil2965.t2.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000106_pilon 518642..521428 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2965.t2.start1Gchil2965.t2.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000106_pilon 521426..521428 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2965.t2Gchil2965.t2Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000106_pilon 518642..521428 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil2965.t2 ID=Gchil2965.t2|Name=Gchil2965.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=929bp
MAVDNPTAIALQLEAPATLNRFARAASSALTSESTLALFEHRNNQYSVHG
SIHTQKAARLLPNDCHTSTDLPASPPLPTLHFDIRTARTLASLALQNGLK
IHIWGVCTDGRIVSRMDASPGNLSSLDAWLGDSRSAALDDGSVISVRILM
EKGQRVMGVCSWDDVSSTLSVLHVMEDDSFSNLETIIVATNTREALFCES
DTSDFEMAKLQNVLTKCGVAATSLNKRSFDPADVPSDLEKLVGSKHTIAN
FLDTRVSVSAISAIIEYIGLLRDTSREGCVNIKQLTTSAYMHLDNAAIRA
LNILPYPGDGGHRASLFGLLKKTKSAMGSRLLRRWLSQPLQDIDAINERL
DIVHAFLCNQRRREAILDDHLNKLPDLSVLCARFTKNNGARASLQDVVRL
YQCSIRLPFLCDELVSDDRNPLLKERFSDPLRKLASELGNFEALVETTID
LEQIENGEFVLSPSVHPDLQELREQQDNILSDVDTEYQKAMNSISGLKND
SLKLEKKDNLGYFFRLTRKEEKLIRGKKQFVVLETRKDGVRFQTRGLQRL
SSAYQEIADQYRQRESEMRIKTLEVAGTYIEVFLDVSAIIAELDVLCAFA
TVAAEGRGEYCRPEIKPAGCSLVIKGSRHPIVEENLIDASVFVSNDLSLI
REGSGSEDGEGGGSLLLVTGPNMGGKSTYIRSAGVLTLMAHVGCFVPATQ
ATVPITDRIFARVGAGDNQHRAISTFMSEMLETAAILKSATSKSLVIIDE
LGRGTGTMDGYGLAYAISRHIASKIKCVCLFATHFYELTSLEKDVHSVRN
VHVSAYTEPGSNKLTFLYEVQPGACDQSFGVNVAEMAHFPSTVVEAAKRK
AAELEGFNAPTKRVKLAEVSGEERKAGQKLITKFLADVRELPVATKAEAE
RSIISARALRSKLLLEKNAYVSALLTEG*
back to top

spliced messenger RNA

>Gchil2965.t2 ID=Gchil2965.t2|Name=Gchil2965.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2787bp|location=Sequence derived from alignment at tig00000106_pilon:518642..521428- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCGTCGACAATCCAACGGCCATCGCCTTGCAACTAGAGGCGCCCGC
CACGCTCAACCGCTTCGCCCGCGCTGCTAGCTCCGCATTAACATCCGAAT
CCACACTGGCGCTCTTCGAACATCGAAACAACCAATACTCTGTTCATGGT
TCCATCCATACTCAGAAAGCCGCCCGTCTGCTACCGAATGACTGCCACAC
TTCAACAGACCTTCCAGCATCCCCCCCATTGCCCACGTTGCACTTCGACA
TACGCACTGCCCGTACTTTGGCATCATTAGCCTTGCAGAACGGGCTCAAG
ATACACATATGGGGCGTCTGCACCGATGGCCGTATCGTTTCTAGGATGGA
TGCATCGCCTGGAAATCTCTCTTCATTGGACGCGTGGTTGGGCGATTCTC
GAAGCGCTGCCCTGGACGACGGCTCTGTGATTAGTGTTCGCATTCTCATG
GAAAAAGGCCAGAGAGTCATGGGTGTTTGCTCATGGGATGATGTTTCTTC
CACACTCTCTGTTCTGCACGTTATGGAGGATGATTCCTTTTCCAATTTGG
AGACCATCATAGTTGCCACAAATACGAGGGAGGCACTGTTTTGTGAGTCT
GATACTTCTGATTTTGAGATGGCCAAGCTACAAAATGTTCTCACCAAATG
TGGAGTCGCAGCTACCTCTCTCAACAAACGTTCTTTCGACCCCGCAGATG
TCCCTTCAGATTTAGAGAAACTCGTTGGTTCGAAGCATACTATCGCCAAC
TTTTTGGATACGCGAGTCTCTGTGTCGGCCATAAGTGCTATCATTGAGTA
TATTGGTCTTTTGAGGGACACAAGCCGAGAGGGCTGTGTGAACATAAAAC
AACTCACCACGTCTGCTTACATGCATCTCGACAATGCAGCTATTCGCGCG
TTGAATATACTTCCTTACCCTGGAGATGGTGGTCACAGGGCGAGCCTGTT
CGGACTCCTGAAGAAAACAAAGAGTGCCATGGGCTCGCGTCTGTTGCGTA
GGTGGCTCTCACAACCTCTACAAGACATCGATGCCATTAATGAACGCCTG
GATATTGTGCATGCATTTCTTTGCAATCAACGCCGTCGCGAAGCAATTCT
CGACGATCATTTGAACAAGTTGCCAGACCTGAGCGTGTTGTGTGCTCGCT
TTACAAAGAATAATGGTGCCAGAGCATCATTGCAGGATGTTGTTCGGCTC
TACCAATGTTCTATCCGCCTTCCGTTTCTTTGTGATGAACTCGTTAGTGA
TGATCGTAATCCCCTGTTGAAAGAGCGTTTCTCTGATCCTCTTAGAAAAC
TGGCATCGGAGCTTGGAAACTTCGAAGCGTTGGTCGAAACGACAATTGAT
CTCGAACAAATTGAAAATGGAGAGTTTGTGCTTAGCCCTTCGGTTCACCC
CGACCTCCAGGAACTTCGAGAGCAGCAAGATAATATCTTAAGTGATGTAG
ACACTGAGTATCAGAAAGCAATGAATTCTATATCTGGGCTGAAGAACGAT
TCACTCAAGCTCGAAAAGAAGGATAACCTGGGTTACTTTTTCCGACTTAC
GCGGAAAGAGGAGAAACTCATTCGCGGGAAAAAGCAGTTTGTAGTACTGG
AGACGAGAAAGGACGGAGTGCGATTTCAGACTAGGGGGTTACAAAGATTA
TCGTCAGCTTACCAAGAGATTGCTGACCAGTACCGCCAACGAGAAAGTGA
GATGCGCATCAAGACGTTGGAAGTTGCTGGAACCTACATTGAAGTGTTCC
TTGATGTGTCCGCAATTATCGCGGAGCTGGATGTCTTGTGTGCGTTTGCC
ACAGTGGCAGCCGAAGGGCGAGGTGAATATTGTCGCCCTGAAATCAAACC
AGCTGGTTGCAGCTTGGTCATCAAAGGGTCACGCCATCCCATTGTCGAAG
AAAATTTGATCGATGCATCCGTGTTTGTTTCCAACGATCTCAGTTTGATT
CGAGAGGGTAGTGGATCAGAAGACGGCGAGGGAGGAGGATCGCTGTTGTT
AGTGACTGGACCAAACATGGGTGGAAAATCTACTTACATTCGAAGTGCTG
GTGTTTTGACACTCATGGCGCACGTTGGATGTTTTGTGCCGGCGACTCAG
GCTACAGTCCCAATAACGGACAGAATCTTTGCTCGAGTCGGGGCTGGAGA
CAACCAGCACCGTGCTATATCTACGTTTATGTCCGAGATGCTCGAGACAG
CAGCAATTCTCAAGTCAGCTACGTCGAAGTCTCTAGTTATTATTGACGAA
TTAGGGCGGGGGACGGGCACTATGGACGGATATGGATTAGCATACGCAAT
TAGCAGACACATTGCGTCCAAGATCAAATGTGTTTGTTTGTTCGCCACTC
ACTTTTATGAACTCACGTCACTCGAAAAGGACGTTCATTCTGTAAGGAAT
GTGCATGTCTCAGCCTATACTGAGCCAGGTAGCAACAAATTAACATTTCT
TTATGAGGTGCAGCCCGGTGCTTGTGACCAGAGTTTCGGTGTGAACGTGG
CAGAGATGGCACACTTTCCGTCCACGGTTGTTGAGGCAGCCAAACGGAAG
GCAGCAGAACTCGAGGGCTTCAACGCTCCGACCAAACGCGTCAAACTCGC
AGAGGTATCAGGGGAAGAACGTAAGGCCGGCCAGAAACTCATTACTAAGT
TCTTGGCGGATGTAAGAGAGCTTCCAGTCGCCACAAAAGCGGAAGCAGAA
CGGTCTATCATATCGGCTCGTGCGCTGAGAAGCAAATTGCTTCTCGAGAA
AAACGCCTATGTCAGCGCGTTATTGACAGAAGGCTGA
back to top

protein sequence of Gchil2965.t2

>Gchil2965.t2 ID=Gchil2965.t2|Name=Gchil2965.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=929bp
MAVDNPTAIALQLEAPATLNRFARAASSALTSESTLALFEHRNNQYSVHG
SIHTQKAARLLPNDCHTSTDLPASPPLPTLHFDIRTARTLASLALQNGLK
IHIWGVCTDGRIVSRMDASPGNLSSLDAWLGDSRSAALDDGSVISVRILM
EKGQRVMGVCSWDDVSSTLSVLHVMEDDSFSNLETIIVATNTREALFCES
DTSDFEMAKLQNVLTKCGVAATSLNKRSFDPADVPSDLEKLVGSKHTIAN
FLDTRVSVSAISAIIEYIGLLRDTSREGCVNIKQLTTSAYMHLDNAAIRA
LNILPYPGDGGHRASLFGLLKKTKSAMGSRLLRRWLSQPLQDIDAINERL
DIVHAFLCNQRRREAILDDHLNKLPDLSVLCARFTKNNGARASLQDVVRL
YQCSIRLPFLCDELVSDDRNPLLKERFSDPLRKLASELGNFEALVETTID
LEQIENGEFVLSPSVHPDLQELREQQDNILSDVDTEYQKAMNSISGLKND
SLKLEKKDNLGYFFRLTRKEEKLIRGKKQFVVLETRKDGVRFQTRGLQRL
SSAYQEIADQYRQRESEMRIKTLEVAGTYIEVFLDVSAIIAELDVLCAFA
TVAAEGRGEYCRPEIKPAGCSLVIKGSRHPIVEENLIDASVFVSNDLSLI
REGSGSEDGEGGGSLLLVTGPNMGGKSTYIRSAGVLTLMAHVGCFVPATQ
ATVPITDRIFARVGAGDNQHRAISTFMSEMLETAAILKSATSKSLVIIDE
LGRGTGTMDGYGLAYAISRHIASKIKCVCLFATHFYELTSLEKDVHSVRN
VHVSAYTEPGSNKLTFLYEVQPGACDQSFGVNVAEMAHFPSTVVEAAKRK
AAELEGFNAPTKRVKLAEVSGEERKAGQKLITKFLADVRELPVATKAEAE
RSIISARALRSKLLLEKNAYVSALLTEG*
back to top

mRNA from alignment at tig00000106_pilon:518642..521428-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil2965.t2 ID=Gchil2965.t2|Name=Gchil2965.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2787bp|location=Sequence derived from alignment at tig00000106_pilon:518642..521428- (Gracilaria chilensis NLEC103_M9 male)
ATGGCCGTCGACAATCCAACGGCCATCGCCTTGCAACTAGAGGCGCCCGC CACGCTCAACCGCTTCGCCCGCGCTGCTAGCTCCGCATTAACATCCGAAT CCACACTGGCGCTCTTCGAACATCGAAACAACCAATACTCTGTTCATGGT TCCATCCATACTCAGAAAGCCGCCCGTCTGCTACCGAATGACTGCCACAC TTCAACAGACCTTCCAGCATCCCCCCCATTGCCCACGTTGCACTTCGACA TACGCACTGCCCGTACTTTGGCATCATTAGCCTTGCAGAACGGGCTCAAG ATACACATATGGGGCGTCTGCACCGATGGCCGTATCGTTTCTAGGATGGA TGCATCGCCTGGAAATCTCTCTTCATTGGACGCGTGGTTGGGCGATTCTC GAAGCGCTGCCCTGGACGACGGCTCTGTGATTAGTGTTCGCATTCTCATG GAAAAAGGCCAGAGAGTCATGGGTGTTTGCTCATGGGATGATGTTTCTTC CACACTCTCTGTTCTGCACGTTATGGAGGATGATTCCTTTTCCAATTTGG AGACCATCATAGTTGCCACAAATACGAGGGAGGCACTGTTTTGTGAGTCT GATACTTCTGATTTTGAGATGGCCAAGCTACAAAATGTTCTCACCAAATG TGGAGTCGCAGCTACCTCTCTCAACAAACGTTCTTTCGACCCCGCAGATG TCCCTTCAGATTTAGAGAAACTCGTTGGTTCGAAGCATACTATCGCCAAC TTTTTGGATACGCGAGTCTCTGTGTCGGCCATAAGTGCTATCATTGAGTA TATTGGTCTTTTGAGGGACACAAGCCGAGAGGGCTGTGTGAACATAAAAC AACTCACCACGTCTGCTTACATGCATCTCGACAATGCAGCTATTCGCGCG TTGAATATACTTCCTTACCCTGGAGATGGTGGTCACAGGGCGAGCCTGTT CGGACTCCTGAAGAAAACAAAGAGTGCCATGGGCTCGCGTCTGTTGCGTA GGTGGCTCTCACAACCTCTACAAGACATCGATGCCATTAATGAACGCCTG GATATTGTGCATGCATTTCTTTGCAATCAACGCCGTCGCGAAGCAATTCT CGACGATCATTTGAACAAGTTGCCAGACCTGAGCGTGTTGTGTGCTCGCT TTACAAAGAATAATGGTGCCAGAGCATCATTGCAGGATGTTGTTCGGCTC TACCAATGTTCTATCCGCCTTCCGTTTCTTTGTGATGAACTCGTTAGTGA TGATCGTAATCCCCTGTTGAAAGAGCGTTTCTCTGATCCTCTTAGAAAAC TGGCATCGGAGCTTGGAAACTTCGAAGCGTTGGTCGAAACGACAATTGAT CTCGAACAAATTGAAAATGGAGAGTTTGTGCTTAGCCCTTCGGTTCACCC CGACCTCCAGGAACTTCGAGAGCAGCAAGATAATATCTTAAGTGATGTAG ACACTGAGTATCAGAAAGCAATGAATTCTATATCTGGGCTGAAGAACGAT TCACTCAAGCTCGAAAAGAAGGATAACCTGGGTTACTTTTTCCGACTTAC GCGGAAAGAGGAGAAACTCATTCGCGGGAAAAAGCAGTTTGTAGTACTGG AGACGAGAAAGGACGGAGTGCGATTTCAGACTAGGGGGTTACAAAGATTA TCGTCAGCTTACCAAGAGATTGCTGACCAGTACCGCCAACGAGAAAGTGA GATGCGCATCAAGACGTTGGAAGTTGCTGGAACCTACATTGAAGTGTTCC TTGATGTGTCCGCAATTATCGCGGAGCTGGATGTCTTGTGTGCGTTTGCC ACAGTGGCAGCCGAAGGGCGAGGTGAATATTGTCGCCCTGAAATCAAACC AGCTGGTTGCAGCTTGGTCATCAAAGGGTCACGCCATCCCATTGTCGAAG AAAATTTGATCGATGCATCCGTGTTTGTTTCCAACGATCTCAGTTTGATT CGAGAGGGTAGTGGATCAGAAGACGGCGAGGGAGGAGGATCGCTGTTGTT AGTGACTGGACCAAACATGGGTGGAAAATCTACTTACATTCGAAGTGCTG GTGTTTTGACACTCATGGCGCACGTTGGATGTTTTGTGCCGGCGACTCAG GCTACAGTCCCAATAACGGACAGAATCTTTGCTCGAGTCGGGGCTGGAGA CAACCAGCACCGTGCTATATCTACGTTTATGTCCGAGATGCTCGAGACAG CAGCAATTCTCAAGTCAGCTACGTCGAAGTCTCTAGTTATTATTGACGAA TTAGGGCGGGGGACGGGCACTATGGACGGATATGGATTAGCATACGCAAT TAGCAGACACATTGCGTCCAAGATCAAATGTGTTTGTTTGTTCGCCACTC ACTTTTATGAACTCACGTCACTCGAAAAGGACGTTCATTCTGTAAGGAAT GTGCATGTCTCAGCCTATACTGAGCCAGGTAGCAACAAATTAACATTTCT TTATGAGGTGCAGCCCGGTGCTTGTGACCAGAGTTTCGGTGTGAACGTGG CAGAGATGGCACACTTTCCGTCCACGGTTGTTGAGGCAGCCAAACGGAAG GCAGCAGAACTCGAGGGCTTCAACGCTCCGACCAAACGCGTCAAACTCGC AGAGGTATCAGGGGAAGAACGTAAGGCCGGCCAGAAACTCATTACTAAGT TCTTGGCGGATGTAAGAGAGCTTCCAGTCGCCACAAAAGCGGAAGCAGAA CGGTCTATCATATCGGCTCGTGCGCTGAGAAGCAAATTGCTTCTCGAGAA AAACGCCTATGTCAGCGCGTTATTGACAGAAGGCTGA
back to top

Coding sequence (CDS) from alignment at tig00000106_pilon:518642..521428-

>Gchil2965.t2 ID=Gchil2965.t2|Name=Gchil2965.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2787bp|location=Sequence derived from alignment at tig00000106_pilon:518642..521428- (Gracilaria chilensis NLEC103_M9 male)
ATGGCCGTCGACAATCCAACGGCCATCGCCTTGCAACTAGAGGCGCCCGC
CACGCTCAACCGCTTCGCCCGCGCTGCTAGCTCCGCATTAACATCCGAAT
CCACACTGGCGCTCTTCGAACATCGAAACAACCAATACTCTGTTCATGGT
TCCATCCATACTCAGAAAGCCGCCCGTCTGCTACCGAATGACTGCCACAC
TTCAACAGACCTTCCAGCATCCCCCCCATTGCCCACGTTGCACTTCGACA
TACGCACTGCCCGTACTTTGGCATCATTAGCCTTGCAGAACGGGCTCAAG
ATACACATATGGGGCGTCTGCACCGATGGCCGTATCGTTTCTAGGATGGA
TGCATCGCCTGGAAATCTCTCTTCATTGGACGCGTGGTTGGGCGATTCTC
GAAGCGCTGCCCTGGACGACGGCTCTGTGATTAGTGTTCGCATTCTCATG
GAAAAAGGCCAGAGAGTCATGGGTGTTTGCTCATGGGATGATGTTTCTTC
CACACTCTCTGTTCTGCACGTTATGGAGGATGATTCCTTTTCCAATTTGG
AGACCATCATAGTTGCCACAAATACGAGGGAGGCACTGTTTTGTGAGTCT
GATACTTCTGATTTTGAGATGGCCAAGCTACAAAATGTTCTCACCAAATG
TGGAGTCGCAGCTACCTCTCTCAACAAACGTTCTTTCGACCCCGCAGATG
TCCCTTCAGATTTAGAGAAACTCGTTGGTTCGAAGCATACTATCGCCAAC
TTTTTGGATACGCGAGTCTCTGTGTCGGCCATAAGTGCTATCATTGAGTA
TATTGGTCTTTTGAGGGACACAAGCCGAGAGGGCTGTGTGAACATAAAAC
AACTCACCACGTCTGCTTACATGCATCTCGACAATGCAGCTATTCGCGCG
TTGAATATACTTCCTTACCCTGGAGATGGTGGTCACAGGGCGAGCCTGTT
CGGACTCCTGAAGAAAACAAAGAGTGCCATGGGCTCGCGTCTGTTGCGTA
GGTGGCTCTCACAACCTCTACAAGACATCGATGCCATTAATGAACGCCTG
GATATTGTGCATGCATTTCTTTGCAATCAACGCCGTCGCGAAGCAATTCT
CGACGATCATTTGAACAAGTTGCCAGACCTGAGCGTGTTGTGTGCTCGCT
TTACAAAGAATAATGGTGCCAGAGCATCATTGCAGGATGTTGTTCGGCTC
TACCAATGTTCTATCCGCCTTCCGTTTCTTTGTGATGAACTCGTTAGTGA
TGATCGTAATCCCCTGTTGAAAGAGCGTTTCTCTGATCCTCTTAGAAAAC
TGGCATCGGAGCTTGGAAACTTCGAAGCGTTGGTCGAAACGACAATTGAT
CTCGAACAAATTGAAAATGGAGAGTTTGTGCTTAGCCCTTCGGTTCACCC
CGACCTCCAGGAACTTCGAGAGCAGCAAGATAATATCTTAAGTGATGTAG
ACACTGAGTATCAGAAAGCAATGAATTCTATATCTGGGCTGAAGAACGAT
TCACTCAAGCTCGAAAAGAAGGATAACCTGGGTTACTTTTTCCGACTTAC
GCGGAAAGAGGAGAAACTCATTCGCGGGAAAAAGCAGTTTGTAGTACTGG
AGACGAGAAAGGACGGAGTGCGATTTCAGACTAGGGGGTTACAAAGATTA
TCGTCAGCTTACCAAGAGATTGCTGACCAGTACCGCCAACGAGAAAGTGA
GATGCGCATCAAGACGTTGGAAGTTGCTGGAACCTACATTGAAGTGTTCC
TTGATGTGTCCGCAATTATCGCGGAGCTGGATGTCTTGTGTGCGTTTGCC
ACAGTGGCAGCCGAAGGGCGAGGTGAATATTGTCGCCCTGAAATCAAACC
AGCTGGTTGCAGCTTGGTCATCAAAGGGTCACGCCATCCCATTGTCGAAG
AAAATTTGATCGATGCATCCGTGTTTGTTTCCAACGATCTCAGTTTGATT
CGAGAGGGTAGTGGATCAGAAGACGGCGAGGGAGGAGGATCGCTGTTGTT
AGTGACTGGACCAAACATGGGTGGAAAATCTACTTACATTCGAAGTGCTG
GTGTTTTGACACTCATGGCGCACGTTGGATGTTTTGTGCCGGCGACTCAG
GCTACAGTCCCAATAACGGACAGAATCTTTGCTCGAGTCGGGGCTGGAGA
CAACCAGCACCGTGCTATATCTACGTTTATGTCCGAGATGCTCGAGACAG
CAGCAATTCTCAAGTCAGCTACGTCGAAGTCTCTAGTTATTATTGACGAA
TTAGGGCGGGGGACGGGCACTATGGACGGATATGGATTAGCATACGCAAT
TAGCAGACACATTGCGTCCAAGATCAAATGTGTTTGTTTGTTCGCCACTC
ACTTTTATGAACTCACGTCACTCGAAAAGGACGTTCATTCTGTAAGGAAT
GTGCATGTCTCAGCCTATACTGAGCCAGGTAGCAACAAATTAACATTTCT
TTATGAGGTGCAGCCCGGTGCTTGTGACCAGAGTTTCGGTGTGAACGTGG
CAGAGATGGCACACTTTCCGTCCACGGTTGTTGAGGCAGCCAAACGGAAG
GCAGCAGAACTCGAGGGCTTCAACGCTCCGACCAAACGCGTCAAACTCGC
AGAGGTATCAGGGGAAGAACGTAAGGCCGGCCAGAAACTCATTACTAAGT
TCTTGGCGGATGTAAGAGAGCTTCCAGTCGCCACAAAAGCGGAAGCAGAA
CGGTCTATCATATCGGCTCGTGCGCTGAGAAGCAAATTGCTTCTCGAGAA
AAACGCCTATGTCAGCGCGTTATTGACAGAAGGCTGA
back to top