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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 1121405.dsmv_0737 |
| PFAMs | Malectin |
| Max annot lvl | 28221|Deltaproteobacteria |
| Evalue | 2e-16 |
| EggNOG OGs | COG1649@1|root,COG2133@1|root,COG2755@1|root,COG3023@1|root,COG3250@1|root,COG3291@1|root,COG1649@2|Bacteria,COG2133@2|Bacteria,COG2755@2|Bacteria,COG3023@2|Bacteria,COG3250@2|Bacteria,COG3291@2|Bacteria,1R2HQ@1224|Proteobacteria,42ZN7@68525|delta/epsilon subdivisions,2WUV4@28221|Deltaproteobacteria |
| Description | PFAM Di-glucose binding within endoplasmic reticulum |
| COG category | GM |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil2917.t1 ID=Gchil2917.t1|Name=Gchil2917.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=839bp MAPLYSHAVALLLFASLALAARVLPPPNVSLPNSPRLLPFARQVTEADLP RVPPSFNINSGGPAVGRFVADNPAWLVGTSDVFVTDDAVIGGAEPINLPM YRSHRFGVDASTWGYDIPVADPGTYACTVHFAETDAASFVDGRRVFDLVL ATAHGPPAVFPNIDITAELAGAQFTVLTKTAPSLLITGILSVRVVSDVGN PIISGITCERHADLPDGVAPDLQAAPIIPTDAVVPTTPELTFPETNVDVN CGGPSLGRFVADTTEDYSWIRGETSMWEGPEGVVIGGAQPQDAPAVLSHR YGVAGSQWGYTIPVLHPGIYDCSLHFAETDTAFFVVGARVFDVTVNGVTL SDIDVFAETGRAEFTALVKTFSELTVTDSIVIDLKPKLGDAFLSAITCAK TAQLPFVFTPQPSATPATVGPQQTVTPPEMDRETLGPDTAETVNPDVTEP QVLVPQHDDAAATDVVIIAGGDQEETETPGVSETADAETAQTDDSAPPTA TPEIVPPVHAPESVLSTATLAPGESETPESMPPATIATPAPINPDETDMP VESPSPEASTPVSPEDTTSPSPQQSPLVEPTAQAAPSSTFDAAGEPLDSL RETALTPVDSQLLISYNLGVTIDDGSPLTSRVRDAIKKVGNDGITGDLQW AATDISRDDDAIRQSDTESDYIMVMQVLYEAEQDRERSQARFVEFVQSGE MNDNLREEGYGNVAISIRDASNALGSESESLTQTSTIVAVIVGCTLLVMV MVSIVVFYVLRRKRRSGDDFDAPPPTMSESEMSSVVERTETAASIEYLDD DSTFTAATSRAGENPDQMAYVKDALGRGTDGAHGTTSL* back to topspliced messenger RNA >Gchil2917.t1 ID=Gchil2917.t1|Name=Gchil2917.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2517bp|location=Sequence derived from alignment at tig00000106_pilon:258973..261489+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCTCCCCTCTACTCGCACGCCGTCGCTCTCCTTCTCTTCGCGTCGCT GGCCCTCGCCGCCCGCGTCCTTCCTCCCCCAAATGTGTCCCTCCCCAATT CCCCCCGCCTGCTCCCCTTCGCCAGACAGGTCACCGAAGCTGATCTACCC CGCGTCCCTCCTTCCTTCAACATCAACTCTGGCGGCCCCGCAGTCGGCCG CTTCGTTGCCGACAACCCAGCCTGGCTAGTCGGCACCTCCGACGTCTTCG TTACCGACGACGCCGTCATCGGCGGCGCAGAGCCTATCAACCTCCCCATG TACCGTTCCCATCGCTTCGGCGTCGACGCCTCCACCTGGGGCTATGACAT CCCCGTCGCCGACCCCGGAACCTACGCCTGTACCGTCCACTTTGCCGAAA CCGATGCTGCCTCCTTTGTCGACGGCAGGCGCGTCTtcgacctcgtcctc gccaccgcccacggcccgcccGCCGTCTTCCCGAACATTGACATCACCGC CGAGCTGGCCGGCGCCCAATTCACCGTTCTCACCAAGACCGCCCCATCGC TCCTCATCACCGGCATTCTCTCCGTTCGCGTCGTGTCCGACGTTGGCAAC CCCATCATCTCCGGCATCACCTGCGAGCGTCACGCTGACCTACCGGACGG TGTCGCCCCAGACTTGCAAGCCGCTCCCATCATTCCCACTGATGCCGTTG TGCCCACCACCCCAGAGCTCACCTTCCCTGAAACCAACGTCGACGTCAAT TGCGGCGGCCCCTCGCTCGGCCGCTTCGTCGCAGACACCACAGAAGACTA TTCATGGATTCGCGGCGAAACCTCCATGTGGGAAGGCCCAGAAGGCGTCG TCATCGGCGGCGCGCAGCCGCAAGACGCCCCCGCCGTTCTCTCCCACCGA TACGGTGTCGCAGGATCTCAATGGGGCTACACCATCCCCGTGCTCCACCC CGGCATCTATGATTGCTCGCTTCATTTTGCCGAAACCGACACCGCGTTCT TTGTCGTTGGTGCTCGCGTCTTCGATGTCACCGTCAACGGCGTCACGCTT TCCGATATTGATGTCTTTGCCGAAACCGGCCGCGCTGAGTTCACTGCGCT TGTCAAGACTTTTTCCGAGCTCACTGTCACTGATTCCATTGTAATCGACC TCAAGCCCAAGCTTGGCGACGCCTTTCTCTCCGCCATCACTTGCGCAAAA ACCGCACAGCTTCCGTTCGTCTTCACCCCACAGCCTTCAGCTACCCCGGC AACCGTCGGTCCGCAGCAAACTGTCACTCCACCTGAGATGGACCGCGAAA CCCTCGGCCCAGACACCGCCGAAACAGTCAACCCGGACGTCACCGAGCCG CAAGTCCTCGTTCCTCAGCATGATGACGCAGCTGCCACCGACGTCGTCAT TATCGCCGGCGGTGACCAAGAGGAGACCGAGACTCCTGGCGTATCTGAAA CGGCCGATGCTGAAACTGCTCAAACTGATGACAGTGCGCCGCCCACTGCA ACTCCCGAGATTGTGCCGCCTGTGCATGCTCCCGAGAGCGTGCTATCCAC CGCAACTCTTGCGCCTGGTGAATCTGAAACTCCTGAGAGTATGCCGCCCG CCACAATTGCCACCCCCGCTCCCATCAACCCGGACGAGACGGACATGCCC GTGGAGAGTCCCTCGCCTGAGGCGAGCACGCCAGTGTCGCCGGAGGACAC TACTTCGCCCTCTCCACAACAGTCTCCGTTGGTTGAGCCCACGGCGCAGG CCGCGCCGTCAAGCACATTTGATGCCGCCGGAGAACCGCTCGATTCGCTT AGAGAGACAGCCCTCACACCCGTTGACTCTCAGCTTCTCATCAGTTACAA CCTGGGCGTCACCATTGACGACGGCAGCCCGCTAACGAGCCGGGTACGAG ACGCAATCAAGAAGGTTGGTAATGATGGCATAACTGGCGACTTGCAATGG GCCGCAACTGATATCAGTCGAGATGATGATGCTATCCGTCAGAGTGACAC CGAGTCTGATTACATTATGGTCATGCAGGTTCTGTACGAAGCAGAACAGG ATCGAGAGCGGTCGCAAGCACGATTTGTAGAATTTGTTCAGAGTGGCGAG ATGAACGATAACTTGAGAGAAGAAGGATATGGAAACGTGGCTATTTCTAT ACGCGATGCATCCAATGCACTTGGTTCTGAGTCGGAGTCTTTGACCCAAA CGTCTACCATTGTGGCTGTCATTGTCGGCTGCACGCTACTCGTTATGGTA ATGGTATCAATCGTCGTCTTTTACGTTCTTCGACGCAAACGCCGTAGCGG AGACGACTTCGACGCCCCTCCCCCTACCATGAGTGAATCTGAAATGTCTT CCGTTGTCGAAAGGACAGAGACGGCGGCCTCTATCGAGTATCTGGATGAT GATTCGACTTTCACTGCTGCCACCAGTCGTGCTGGAGAGAATCCAGACCA GATGGCCTATGTCAAGGACGCCTTAGGTCGCGGCACGGATGGTGCCCATG GAACAACCTCGCTCTGA back to topprotein sequence of Gchil2917.t1 >Gchil2917.t1 ID=Gchil2917.t1|Name=Gchil2917.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=839bp
MAPLYSHAVALLLFASLALAARVLPPPNVSLPNSPRLLPFARQVTEADLP RVPPSFNINSGGPAVGRFVADNPAWLVGTSDVFVTDDAVIGGAEPINLPM YRSHRFGVDASTWGYDIPVADPGTYACTVHFAETDAASFVDGRRVFDLVL ATAHGPPAVFPNIDITAELAGAQFTVLTKTAPSLLITGILSVRVVSDVGN PIISGITCERHADLPDGVAPDLQAAPIIPTDAVVPTTPELTFPETNVDVN CGGPSLGRFVADTTEDYSWIRGETSMWEGPEGVVIGGAQPQDAPAVLSHR YGVAGSQWGYTIPVLHPGIYDCSLHFAETDTAFFVVGARVFDVTVNGVTL SDIDVFAETGRAEFTALVKTFSELTVTDSIVIDLKPKLGDAFLSAITCAK TAQLPFVFTPQPSATPATVGPQQTVTPPEMDRETLGPDTAETVNPDVTEP QVLVPQHDDAAATDVVIIAGGDQEETETPGVSETADAETAQTDDSAPPTA TPEIVPPVHAPESVLSTATLAPGESETPESMPPATIATPAPINPDETDMP VESPSPEASTPVSPEDTTSPSPQQSPLVEPTAQAAPSSTFDAAGEPLDSL RETALTPVDSQLLISYNLGVTIDDGSPLTSRVRDAIKKVGNDGITGDLQW AATDISRDDDAIRQSDTESDYIMVMQVLYEAEQDRERSQARFVEFVQSGE MNDNLREEGYGNVAISIRDASNALGSESESLTQTSTIVAVIVGCTLLVMV MVSIVVFYVLRRKRRSGDDFDAPPPTMSESEMSSVVERTETAASIEYLDD DSTFTAATSRAGENPDQMAYVKDALGRGTDGAHGTTSL* back to topmRNA from alignment at tig00000106_pilon:258973..261489+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil2917.t1 ID=Gchil2917.t1|Name=Gchil2917.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2517bp|location=Sequence derived from alignment at tig00000106_pilon:258973..261489+ (Gracilaria chilensis NLEC103_M9 male) ATGGCTCCCCTCTACTCGCACGCCGTCGCTCTCCTTCTCTTCGCGTCGCT
GGCCCTCGCCGCCCGCGTCCTTCCTCCCCCAAATGTGTCCCTCCCCAATT
CCCCCCGCCTGCTCCCCTTCGCCAGACAGGTCACCGAAGCTGATCTACCC
CGCGTCCCTCCTTCCTTCAACATCAACTCTGGCGGCCCCGCAGTCGGCCG
CTTCGTTGCCGACAACCCAGCCTGGCTAGTCGGCACCTCCGACGTCTTCG
TTACCGACGACGCCGTCATCGGCGGCGCAGAGCCTATCAACCTCCCCATG
TACCGTTCCCATCGCTTCGGCGTCGACGCCTCCACCTGGGGCTATGACAT
CCCCGTCGCCGACCCCGGAACCTACGCCTGTACCGTCCACTTTGCCGAAA
CCGATGCTGCCTCCTTTGTCGACGGCAGGCGCGTCTtcgacctcgtcctc
gccaccgcccacggcccgcccGCCGTCTTCCCGAACATTGACATCACCGC
CGAGCTGGCCGGCGCCCAATTCACCGTTCTCACCAAGACCGCCCCATCGC
TCCTCATCACCGGCATTCTCTCCGTTCGCGTCGTGTCCGACGTTGGCAAC
CCCATCATCTCCGGCATCACCTGCGAGCGTCACGCTGACCTACCGGACGG
TGTCGCCCCAGACTTGCAAGCCGCTCCCATCATTCCCACTGATGCCGTTG
TGCCCACCACCCCAGAGCTCACCTTCCCTGAAACCAACGTCGACGTCAAT
TGCGGCGGCCCCTCGCTCGGCCGCTTCGTCGCAGACACCACAGAAGACTA
TTCATGGATTCGCGGCGAAACCTCCATGTGGGAAGGCCCAGAAGGCGTCG
TCATCGGCGGCGCGCAGCCGCAAGACGCCCCCGCCGTTCTCTCCCACCGA
TACGGTGTCGCAGGATCTCAATGGGGCTACACCATCCCCGTGCTCCACCC
CGGCATCTATGATTGCTCGCTTCATTTTGCCGAAACCGACACCGCGTTCT
TTGTCGTTGGTGCTCGCGTCTTCGATGTCACCGTCAACGGCGTCACGCTT
TCCGATATTGATGTCTTTGCCGAAACCGGCCGCGCTGAGTTCACTGCGCT
TGTCAAGACTTTTTCCGAGCTCACTGTCACTGATTCCATTGTAATCGACC
TCAAGCCCAAGCTTGGCGACGCCTTTCTCTCCGCCATCACTTGCGCAAAA
ACCGCACAGCTTCCGTTCGTCTTCACCCCACAGCCTTCAGCTACCCCGGC
AACCGTCGGTCCGCAGCAAACTGTCACTCCACCTGAGATGGACCGCGAAA
CCCTCGGCCCAGACACCGCCGAAACAGTCAACCCGGACGTCACCGAGCCG
CAAGTCCTCGTTCCTCAGCATGATGACGCAGCTGCCACCGACGTCGTCAT
TATCGCCGGCGGTGACCAAGAGGAGACCGAGACTCCTGGCGTATCTGAAA
CGGCCGATGCTGAAACTGCTCAAACTGATGACAGTGCGCCGCCCACTGCA
ACTCCCGAGATTGTGCCGCCTGTGCATGCTCCCGAGAGCGTGCTATCCAC
CGCAACTCTTGCGCCTGGTGAATCTGAAACTCCTGAGAGTATGCCGCCCG
CCACAATTGCCACCCCCGCTCCCATCAACCCGGACGAGACGGACATGCCC
GTGGAGAGTCCCTCGCCTGAGGCGAGCACGCCAGTGTCGCCGGAGGACAC
TACTTCGCCCTCTCCACAACAGTCTCCGTTGGTTGAGCCCACGGCGCAGG
CCGCGCCGTCAAGCACATTTGATGCCGCCGGAGAACCGCTCGATTCGCTT
AGAGAGACAGCCCTCACACCCGTTGACTCTCAGCTTCTCATCAGTTACAA
CCTGGGCGTCACCATTGACGACGGCAGCCCGCTAACGAGCCGGGTACGAG
ACGCAATCAAGAAGGTTGGTAATGATGGCATAACTGGCGACTTGCAATGG
GCCGCAACTGATATCAGTCGAGATGATGATGCTATCCGTCAGAGTGACAC
CGAGTCTGATTACATTATGGTCATGCAGGTTCTGTACGAAGCAGAACAGG
ATCGAGAGCGGTCGCAAGCACGATTTGTAGAATTTGTTCAGAGTGGCGAG
ATGAACGATAACTTGAGAGAAGAAGGATATGGAAACGTGGCTATTTCTAT
ACGCGATGCATCCAATGCACTTGGTTCTGAGTCGGAGTCTTTGACCCAAA
CGTCTACCATTGTGGCTGTCATTGTCGGCTGCACGCTACTCGTTATGGTA
ATGGTATCAATCGTCGTCTTTTACGTTCTTCGACGCAAACGCCGTAGCGG
AGACGACTTCGACGCCCCTCCCCCTACCATGAGTGAATCTGAAATGTCTT
CCGTTGTCGAAAGGACAGAGACGGCGGCCTCTATCGAGTATCTGGATGAT
GATTCGACTTTCACTGCTGCCACCAGTCGTGCTGGAGAGAATCCAGACCA
GATGGCCTATGTCAAGGACGCCTTAGGTCGCGGCACGGATGGTGCCCATG
GAACAACCTCGCTCTGA back to topCoding sequence (CDS) from alignment at tig00000106_pilon:258973..261489+ >Gchil2917.t1 ID=Gchil2917.t1|Name=Gchil2917.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2517bp|location=Sequence derived from alignment at tig00000106_pilon:258973..261489+ (Gracilaria chilensis NLEC103_M9 male) ATGGCTCCCCTCTACTCGCACGCCGTCGCTCTCCTTCTCTTCGCGTCGCT GGCCCTCGCCGCCCGCGTCCTTCCTCCCCCAAATGTGTCCCTCCCCAATT CCCCCCGCCTGCTCCCCTTCGCCAGACAGGTCACCGAAGCTGATCTACCC CGCGTCCCTCCTTCCTTCAACATCAACTCTGGCGGCCCCGCAGTCGGCCG CTTCGTTGCCGACAACCCAGCCTGGCTAGTCGGCACCTCCGACGTCTTCG TTACCGACGACGCCGTCATCGGCGGCGCAGAGCCTATCAACCTCCCCATG TACCGTTCCCATCGCTTCGGCGTCGACGCCTCCACCTGGGGCTATGACAT CCCCGTCGCCGACCCCGGAACCTACGCCTGTACCGTCCACTTTGCCGAAA CCGATGCTGCCTCCTTTGTCGACGGCAGGCGCGTCTtcgacctcgtcctc gccaccgcccacggcccgcccGCCGTCTTCCCGAACATTGACATCACCGC CGAGCTGGCCGGCGCCCAATTCACCGTTCTCACCAAGACCGCCCCATCGC TCCTCATCACCGGCATTCTCTCCGTTCGCGTCGTGTCCGACGTTGGCAAC CCCATCATCTCCGGCATCACCTGCGAGCGTCACGCTGACCTACCGGACGG TGTCGCCCCAGACTTGCAAGCCGCTCCCATCATTCCCACTGATGCCGTTG TGCCCACCACCCCAGAGCTCACCTTCCCTGAAACCAACGTCGACGTCAAT TGCGGCGGCCCCTCGCTCGGCCGCTTCGTCGCAGACACCACAGAAGACTA TTCATGGATTCGCGGCGAAACCTCCATGTGGGAAGGCCCAGAAGGCGTCG TCATCGGCGGCGCGCAGCCGCAAGACGCCCCCGCCGTTCTCTCCCACCGA TACGGTGTCGCAGGATCTCAATGGGGCTACACCATCCCCGTGCTCCACCC CGGCATCTATGATTGCTCGCTTCATTTTGCCGAAACCGACACCGCGTTCT TTGTCGTTGGTGCTCGCGTCTTCGATGTCACCGTCAACGGCGTCACGCTT TCCGATATTGATGTCTTTGCCGAAACCGGCCGCGCTGAGTTCACTGCGCT TGTCAAGACTTTTTCCGAGCTCACTGTCACTGATTCCATTGTAATCGACC TCAAGCCCAAGCTTGGCGACGCCTTTCTCTCCGCCATCACTTGCGCAAAA ACCGCACAGCTTCCGTTCGTCTTCACCCCACAGCCTTCAGCTACCCCGGC AACCGTCGGTCCGCAGCAAACTGTCACTCCACCTGAGATGGACCGCGAAA CCCTCGGCCCAGACACCGCCGAAACAGTCAACCCGGACGTCACCGAGCCG CAAGTCCTCGTTCCTCAGCATGATGACGCAGCTGCCACCGACGTCGTCAT TATCGCCGGCGGTGACCAAGAGGAGACCGAGACTCCTGGCGTATCTGAAA CGGCCGATGCTGAAACTGCTCAAACTGATGACAGTGCGCCGCCCACTGCA ACTCCCGAGATTGTGCCGCCTGTGCATGCTCCCGAGAGCGTGCTATCCAC CGCAACTCTTGCGCCTGGTGAATCTGAAACTCCTGAGAGTATGCCGCCCG CCACAATTGCCACCCCCGCTCCCATCAACCCGGACGAGACGGACATGCCC GTGGAGAGTCCCTCGCCTGAGGCGAGCACGCCAGTGTCGCCGGAGGACAC TACTTCGCCCTCTCCACAACAGTCTCCGTTGGTTGAGCCCACGGCGCAGG CCGCGCCGTCAAGCACATTTGATGCCGCCGGAGAACCGCTCGATTCGCTT AGAGAGACAGCCCTCACACCCGTTGACTCTCAGCTTCTCATCAGTTACAA CCTGGGCGTCACCATTGACGACGGCAGCCCGCTAACGAGCCGGGTACGAG ACGCAATCAAGAAGGTTGGTAATGATGGCATAACTGGCGACTTGCAATGG GCCGCAACTGATATCAGTCGAGATGATGATGCTATCCGTCAGAGTGACAC CGAGTCTGATTACATTATGGTCATGCAGGTTCTGTACGAAGCAGAACAGG ATCGAGAGCGGTCGCAAGCACGATTTGTAGAATTTGTTCAGAGTGGCGAG ATGAACGATAACTTGAGAGAAGAAGGATATGGAAACGTGGCTATTTCTAT ACGCGATGCATCCAATGCACTTGGTTCTGAGTCGGAGTCTTTGACCCAAA CGTCTACCATTGTGGCTGTCATTGTCGGCTGCACGCTACTCGTTATGGTA ATGGTATCAATCGTCGTCTTTTACGTTCTTCGACGCAAACGCCGTAGCGG AGACGACTTCGACGCCCCTCCCCCTACCATGAGTGAATCTGAAATGTCTT CCGTTGTCGAAAGGACAGAGACGGCGGCCTCTATCGAGTATCTGGATGAT GATTCGACTTTCACTGCTGCCACCAGTCGTGCTGGAGAGAATCCAGACCA GATGGCCTATGTCAAGGACGCCTTAGGTCGCGGCACGGATGGTGCCCATG GAACAACCTCGCTCTGA back to top
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