Gchil2604.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gchil2604.t1
Unique Name	Gchil2604.t1
Type	mRNA
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	1684

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004400_pilon	contig	tig00004400_pilon:1786974..1792025 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	130081.XP_005703600.1
Preferred name	POLR1A
PFAMs	RNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5
Max annot lvl	2759\|Eukaryota
KEGG rclass	RC02795
KEGG ko	ko:K02999,ko:K03018
KEGG Reaction	R00435,R00441,R00442,R00443
KEGG Pathway	ko00230,ko00240,ko01100,ko03020,ko04623,ko05169,map00230,map00240,map01100,map03020,map04623,map05169
KEGG Module	M00181,M00182
GOs	GO:0000428,GO:0001054,GO:0003674,GO:0003682,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005736,GO:0005911,GO:0006139,GO:0006351,GO:0006352,GO:0006353,GO:0006360,GO:0006361,GO:0006363,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009303,GO:0009506,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016072,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0030054,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032879,GO:0032880,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0040029,GO:0042790,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0048519,GO:0050789,GO:0055029,GO:0055044,GO:0060255,GO:0060341,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1900180,GO:1900181,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1903827,GO:1903828,GO:1904749,GO:1904750,GO:1990234,GO:1990841
Evalue	8.9e-287
EggNOG OGs	COG0086@1\|root,KOG0262@2759\|Eukaryota
EC	2.7.7.6
Description	negative regulation of protein localization to nucleolus
COG category	K
BRITE	br01611,ko00000,ko00001,ko00002,ko01000,ko03021

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil2604	Gchil2604	Gracilaria chilensis NLEC103_M9 male	gene	tig00004400_pilon 1786974..1792025 +

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil2604.t1.start1	Gchil2604.t1.start1	Gracilaria chilensis NLEC103_M9 male	start_codon	tig00004400_pilon 1786974..1786976 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil2604.t1.CDS1	Gchil2604.t1.CDS1	Gracilaria chilensis NLEC103_M9 male	CDS	tig00004400_pilon 1786974..1792025 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil2604.t1.exon1	Gchil2604.t1.exon1	Gracilaria chilensis NLEC103_M9 male	exon	tig00004400_pilon 1786974..1792025 +

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil2604.t1.stop1	Gchil2604.t1.stop1	Gracilaria chilensis NLEC103_M9 male	stop_codon	tig00004400_pilon 1792023..1792025 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil2604.t1	Gchil2604.t1	Gracilaria chilensis NLEC103_M9 male	polypeptide	tig00004400_pilon 1786974..1792025 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00004400_pilon:1786974..1792025+
coding sequence from alignment at tig00004400_pilon:1786974..1792025+

mRNA sequence

>Gchil2604.t1 ID=Gchil2604.t1|Name=Gchil2604.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1684bp
MDENTRCLRSLDIGHAVSKFSFRFYSEQEARNLSVRRITSAVSYDELGRP
VPYGLYDPVFGPTSFDDGACATCGLTYATCPGHFGHIELPIALPNPLSSA
LVLKLLRSSCWNCHCLRLSESDLCLYYAILLFEDADLPRCGFAVDAYRNL
RKKVAIKIGKLESEQSPIEATVFQPDPDRNSIIKNWHAFLHAMPRPIPQY
LDGINVYDTEAVERAMLKAAKASWRRAKDSKTLARQRSKGWKAIQRIMLE
SSIKSTCTSCDQDPGKIRPGDRGRLFIKRGAASRDLLLSPAEIETQIRSL
WEAHSELFELLYGLCGREVDSSEKARGYMRLFVRVVLVPPSRFRPSAVVG
EMSYAAEHPQNIFYQRILTLTKTLMTAKGSSAEEVEDADLGTSGSEKKKK
KDSVSSSDIVQLLCRMQQTLGELYDNDGKGLDKSTGIRQQLEAKAGLFRQ
HMMGKRVDHSCRSVIGPDVFLDTNEVGIPLSFAKQLTIPEAVIPSNLEQM
KQAVLNGPDNYPGAMAVEGWTLSGDRRMVRLNRAARGIRRTQASLLIQNR
MPNRSSKKYGFSDQTEDISSSVRVGNQIPKVVHRHLKTGDVVLFNRQPTL
HRVSIMAHKVRVLPGDRTIRFHYANCGSYNADFDGDEMNVHVPQDYISRA
EAEELMLSNRHYVVPTSGAPVRGLIQDHIVSATLLSRRDTFLDRQTFTQL
LYVATENIMLRTEMHGKTYELQPPAILKPKHLWTGKQLISAVLGVIRNGR
PGFNLDASSKTTANIVGVEESKILVRDGHLLRGIVDKSSLGASTFGIVHA
IQETYGCDASDDFLSSMSRLCLYFLRLHGHTTGISDLLLREVGDTRRLKI
LTKALDHVAIEATNSVYQTMNQSSKLGGKLAKSGTEARQLIAEMVQKDGA
EAEDRLDAAMKSSLNKVSSDVFRACIPIALSKPFPLNGFAVMTSTGAKGS
PVNSAQISCLLGQTSLEGKRVPRMGGRGATLPCFEPYDASPLAGGFIASR
FLTGVSPQEFFFHAMSGREGLLDTSLKTANSGYLQRCLIKHLEGVRLHYD
GTVRDSDRSVLQFIYGDDGIDPSKSLWLTKKVDWQVSNIKSLETEEIDDT
KSLGLKESVYLSNEVGESSTLLEKMSPGALSRVGVVSDTYSSAIRKAEEG
VGAHRGTVRRFLEKRYQQGAVHAGEAVGVLAGQGIGEPSTQMTLNTFHHA
GSSSAHVTLGIPRLRELLMTAAKYPKTPSMTIPVLGQRPEQKCEELSKKL
RLVRLSDLLLQVEVHEKSISFVPGVTRWALRTVALKMKFPPEEVYKDHLG
FGFGRIVQAVASEYVPHLHRIFEKEMLKISERKGIGIKTAIGCYLKSARK
PPTTNGKGANSDESCNGNLRDMGARLDDEDVNQEQSQEEIALTEAEEEEK
AIPSSSEDEDRSISGDEQQYDASTERKKSDENGNDGDLPSPITPRRSKKK
NGKRKMPKFKAVLSDDDEDMIEFGALGYVYSSVKGSERETVEFEWVLPMA
VLGKLNVSVLMKEIARAVSLSEVDRIQRCFIEFKDNQHNVITEGSNLREV
HELGWGLVDFDRLETNDLYGILQVYGVEALRAALIREFKEVFKAHGIPVN
IRHLSLIADYMTMNGTYRGFNRLSMWDSPGLFQRVTFETSMKFLRDATLD
GFEDITTNPSAAIALGQVYEGGTGGFQLLHTVN*

spliced messenger RNA

>Gchil2604.t1 ID=Gchil2604.t1|Name=Gchil2604.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=5052bp|location=Sequence derived from alignment at tig00004400_pilon:1786974..1792025+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACGAAAACACCAGATGCTTGCGTTCTCTGGACATTGGCCACGCTGT
TTCAAAGTTTTCATTTCGCTTCTACTCAGAACAAGAAGCACGCAACCTAA
GCGTGCGCAGAATAACTTCTGCCGTATCATACGATGAACTTGGTCGCCCA
GTTCCCTATGGTTTATATGATCCAGTTTTTGGACCAACTTCTTTCGATGA
TGGCGCTTGTGCAACATGCGGGCTTACCTATGCTACTTGTCCCGGTCACT
TTGGCCATATTGAACTGCCAATTGCCTTACCCAATCCGCTATCATCTGCT
CTCGTTTTAAAGCTTCTTCGTTCTTCCTGCTGGAACTGTCACTGTCTGCG
CCTTTCTGAGTCTGATCTCTGCCTTTATTATGCGATACTTCTCTTCGAAG
ACGCTGATTTACCCCGCTGCGGCTTCGCGGTAGATGCCTATCGAAACCTA
CGAAAGAAAGTCGCCATTAAAATTGGAAAGCTTGAGTCGGAGCAAAGCCC
GATCGAGGCAACTGTATTTCAACCTGATCCAGACCGCAACTCTATCATCA
AGAACTGGCACGCATTTCTGCACGCCATGCCGCGGCCAATTCCCCAATAC
CTTGACGGTATCAATGTGTATGACACGGAAGCTGTTGAACGAGCAATGTT
GAAAGCTGCAAAAGCTTCATGGAGGCGAGCAAAGGATTCGAAGACACTAG
CTCGCCAACGTTCAAAAGGATGGAAAGCGATTCAGAGAATAATGCTAGAG
TCGTCTATCAAGTCTACGTGCACAAGTTGTGATCAAGACCCGGGCAAAAT
CAGACCAGGGGATCGCGGGCGCCTTTTCATAAAGCGGGGAGCTGCAAGTC
GTGACTTATTGCTCTCGCCAGCCGAGATAGAGACGCAGATTCGATCTTTG
TGGGAAGCACATTCAGAGCTTTTTGAATTACTTTATGGTTTGTGTGGCAG
AGAAGTTGATTCTAGTGAAAAAGCCCGCGGATACATGCGTTTGTTTGTTC
GTGTAGTTTTGGTTCCTCCTTCGAGGTTTCGCCCATCGGCTGTAGTTGGC
GAAATGTCTTATGCTGCCGAACATCCGCAAAATATCTTCTACCAACGCAT
CCTAACCCTGACGAAAACGTTGATGACTGCCAAGGGAAGCAGTGCGGAAG
AAGTAGAAGATGCTGACCTAGGAACTTCTGGTTCTGAAAAGAAGAAAAAG
AAAGATTCCGTTTCGAGCAGTGATATCGTGCAGTTGCTCTGTCGAATGCA
GCAGACATTGGGGGAACTTTATGACAATGACGGGAAAGGGCTGGATAAAT
CAACGGGCATACGACAGCAACTCGAAGCGAAAGCGGGTCTGTTCCGTCAA
CACATGATGGGAAAACGTGTAGATCATAGTTGCAGGTCTGTAATTGGCCC
AGATGTCTTCTTGGATACAAATGAAGTTGGCATACCCCTTAGCTTCGCCA
AGCAATTGACAATCCCAGAAGCGGTCATCCCCAGCAATCTAGAGCAGATG
AAGCAAGCAGTACTGAACGGTCCTGATAATTATCCGGGAGCAATGGCGGT
AGAAGGCTGGACTCTAAGCGGGGATCGACGAATGGTTAGACTGAATCGAG
CGGCTCGTGGAATTCGTCGAACGCAAGCTAGTCTGCTCATTCAAAACCGA
ATGCCGAATAGAAGCAGCAAGAAATATGGTTTCTCGGATCAAACTGAAGA
CATCAGTAGCAGCGTTCGTGTTGGGAACCAGATTCCAAAAGTAGTTCACA
GGCATTTGAAAACCGGTGATGTTGTGCTATTCAATCGGCAGCCTACTCTC
CACAGAGTTTCTATAATGGCTCATAAAGTGCGAGTTCTTCCTGGTGATCG
CACTATCAGGTTCCACTATGCAAACTGTGGGTCTTATAATGCAGATTTTG
ATGGGGATGAGATGAACGTACATGTTCCACAGGATTACATATCTCGAGCG
GAAGCGGAAGAGCTTATGTTGAGCAATAGGCACTACGTTGTCCCTACTTC
GGGAGCACCTGTACGGGGGCTCATTCAGGATCACATTGTCTCTGCGACCT
TACTAAGCCGACGAGACACTTTCTTAGATCGACAGACATTTACACAGTTG
CTCTACGTCGCTACAGAGAACATCATGTTGCGAACTGAAATGCACGGTAA
AACATATGAGCTTCAACCACCGGCAATTTTGAAACCAAAACACCTATGGA
CTGGAAAGCAGCTTATATCCGCCGTACTTGGAGTGATTCGGAATGGGCGA
CCTGGCTTTAATCTTGATGCAAGTTCGAAAACAACGGCAAACATTGTTGG
AGTGGAGGAATCAAAAATCCTAGTACGGGATGGTCACCTTTTGCGTGGTA
TCGTCGACAAAAGTTCCCTCGGTGCTTCCACGTTTGGTATTGTCCACGCT
ATTCAGGAAACTTATGGGTGCGATGCGTCAGATGATTTTTTGAGTTCCAT
GAGTCGCCTATGCTTATACTTTCTTCGACTCCATGGGCATACAACTGGCA
TTAGCGACCTTTTATTGAGGGAAGTTGGTGATACGCGAAGATTGAAAATT
CTGACCAAAGCATTGGACCATGTTGCAATTGAAGCAACCAATTCAGTATA
CCAAACAATGAACCAAAGCTCGAAATTGGGTGGAAAGCTTGCAAAGAGTG
GCACAGAGGCGAGGCAACTAATAGCTGAGATGGTTCAGAAGGATGGCGCT
GAAGCTGAGGATAGACTTGATGCAGCGATGAAGTCTTCCTTGAACAAGGT
TTCTTCAGATGTTTTCAGAGCATGCATTCCGATAGCTCTGTCGAAACCTT
TTCCGTTAAATGGGTTTGCTGTGATGACTAGTACTGGCGCAAAAGGCTCC
CCAGTTAATTCTGCTCAGATTTCTTGCCTTTTGGGGCAAACTAGTTTGGA
AGGGAAGCGCGTTCCGCGAATGGGAGGCAGAGGGGCCACTCTACCATGCT
TTGAGCCTTACGATGCATCACCGCTGGCTGGTGGTTTTATTGCAAGTCGA
TTCTTAACGGGCGTAAGCCCACAAGagttcttctttcacgctatgtctgg
tcgagaaggtctacttgacacatccctgaagacagctaattctggatatc
tgcaaagatgcctgataaagcatcttgaaggagtgcgattgcattatgat
ggaactgtgagggatAGCGACAGATCAGTCTTGCAATTCATTTACGGGGA
TGATGGAATCGATCCCTCGAAATCCTTATGGCTTACGAAGAAGGTTGACT
GGCAGGTATCTAACATCAAGAGTCTGGAGACCGAGGAGATCGATGATACG
AAGAGCCTGGGCCTGAAGGAAAGTGTTTATCTCTCAAACGAGGTAGGCGA
GAGCAGTACATTGCTGGAAAAAATGTCTCCTGGCGCACTTAGCCGGGTTG
GAGTAGTTTCTGATACTTACTCATCAGCTATTAGAAAGGCGGAGGAAGGG
GTTGGAGCGCACCGTGGTACTGTTCGGAGATTCCTGGAGAAAAGATATCA
ACAAGGGGCAGTTCATGCAGGTGAGGCTGTTGGTGTGCTTGCTGGGCAAG
GAATAGGAGAGCCTTCAACTCAAATGACCCTGAATACATTTCATCATGCA
GGGTCAAGCTCAGCTCATGTGACCCTCGGTATACCTCGTTTGCGAGAGCT
ACTCATGACAGCAGCGAAGTATCCCAAAACCCCAAGTATGACAATTCCTG
TGCTCGGACAGAGACCAGAACAGAAATGCGAGGAATTAAGCAAAAAGCTT
CGTCTTGTGAGACTCAGTGATTTACTGCTACAAGTCGAAGTACATGAAAA
GTCCATTAGCTTTGTTCCCGGTGTCACGCGATGGGCTCTAAGAACAGTGG
CTTTGAAGATGAAATTTCCACCTGAAGAGGTTTACAAGGATCATCTTGGG
TTCGGGTTCGGAAGAATTGTCCAAGCTGTGGCAAGTGAATATGTGCCACA
CTTGCACCGAATCTTTGAGAAAGAAATGCTCAAGATTTCAGAACGAAAAG
GAATAGGCATAAAGACGGCGATTGGATGTTATCTCAAAAGTGCTCGGAAA
CCCCCAACGACGAATGGTAAAGGTGCGAATAGTGATGAATCATGTAACGG
GAATCTGAGAGATATGGGTGCACGTTTGGATGATGAAGATGTCAACCAGG
AGCAGTCTCAGGAAGAAATCGCTTTAACTGAAGCCGAAGAGGAAGAAAAA
GCGATCCCGTCTTCATCAGAAGACGAAGATCGTTCCATTTCAGGCGATGA
GCAGCAATACGATGCCAGTACAGAGAGAAAGAAATCCGATGAAAACGGTA
ACGATGGTGACCTTCCTTCCCCAATCACTCCAAGGAGATCAAAGAAGAAA
AATGGAAAGCGCAAAATGCCCAAGTTCAAAGCAGTTCTCTCCGATGACGA
CGAAGATATGATAGAATTCGGAGCTTTGGGCTATGTGTACTCCTCCGTCA
AAGGCTCGGAGAGGGAAACCGTCGAATTTGAATGGGTTCTGCCTATGGCT
GTACTCGGTAAGCTGAATGTTTCAGTGCTGATGAAAGAAATAGCTCGCGC
AGTTAGCCTCTCCGAAGTCGATCGAATCCAAAGATGTTTCATAGAATTCA
AAGACAATCAACATAATGTGATAACAGAGGGGTCTAATCTCCGGGAAGTG
CATGAACTTGGATGGGGTCTGGTGGACTTTGATCGACTCGAGACCAACGA
TTTGTACGGGATCTTGCAAGTTTACGGTGTAGAAGCATTGAGAGCTGCTC
TGATCAGGGAATTCAAAGAAGTCTTCAAGGCCCACGGTATTCCAGTCAAC
ATTCGACATCTTTCTCTGATAGCAGACTATATGACTATGAATGGGACCTA
CCGAGGGTTTAATAGATTGAGTATGTGGGATTCGCCGGGATTGTTCCAGC
GCGTTACTTTCGAGACGAGCATGAAATTCCTGCGTGACGCAACCTTAGAT
GGTTTCGAAGACATCACGACCAACCCAAGTGCGGCCATTGCCTTGGGACA
AGTGTATGAGGGCGGCACAGGAGGGTTCCAGTTGCTTCACACAGTAAATT
AA

protein sequence of Gchil2604.t1

>Gchil2604.t1 ID=Gchil2604.t1|Name=Gchil2604.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1684bp
MDENTRCLRSLDIGHAVSKFSFRFYSEQEARNLSVRRITSAVSYDELGRP
VPYGLYDPVFGPTSFDDGACATCGLTYATCPGHFGHIELPIALPNPLSSA
LVLKLLRSSCWNCHCLRLSESDLCLYYAILLFEDADLPRCGFAVDAYRNL
RKKVAIKIGKLESEQSPIEATVFQPDPDRNSIIKNWHAFLHAMPRPIPQY
LDGINVYDTEAVERAMLKAAKASWRRAKDSKTLARQRSKGWKAIQRIMLE
SSIKSTCTSCDQDPGKIRPGDRGRLFIKRGAASRDLLLSPAEIETQIRSL
WEAHSELFELLYGLCGREVDSSEKARGYMRLFVRVVLVPPSRFRPSAVVG
EMSYAAEHPQNIFYQRILTLTKTLMTAKGSSAEEVEDADLGTSGSEKKKK
KDSVSSSDIVQLLCRMQQTLGELYDNDGKGLDKSTGIRQQLEAKAGLFRQ
HMMGKRVDHSCRSVIGPDVFLDTNEVGIPLSFAKQLTIPEAVIPSNLEQM
KQAVLNGPDNYPGAMAVEGWTLSGDRRMVRLNRAARGIRRTQASLLIQNR
MPNRSSKKYGFSDQTEDISSSVRVGNQIPKVVHRHLKTGDVVLFNRQPTL
HRVSIMAHKVRVLPGDRTIRFHYANCGSYNADFDGDEMNVHVPQDYISRA
EAEELMLSNRHYVVPTSGAPVRGLIQDHIVSATLLSRRDTFLDRQTFTQL
LYVATENIMLRTEMHGKTYELQPPAILKPKHLWTGKQLISAVLGVIRNGR
PGFNLDASSKTTANIVGVEESKILVRDGHLLRGIVDKSSLGASTFGIVHA
IQETYGCDASDDFLSSMSRLCLYFLRLHGHTTGISDLLLREVGDTRRLKI
LTKALDHVAIEATNSVYQTMNQSSKLGGKLAKSGTEARQLIAEMVQKDGA
EAEDRLDAAMKSSLNKVSSDVFRACIPIALSKPFPLNGFAVMTSTGAKGS
PVNSAQISCLLGQTSLEGKRVPRMGGRGATLPCFEPYDASPLAGGFIASR
FLTGVSPQEFFFHAMSGREGLLDTSLKTANSGYLQRCLIKHLEGVRLHYD
GTVRDSDRSVLQFIYGDDGIDPSKSLWLTKKVDWQVSNIKSLETEEIDDT
KSLGLKESVYLSNEVGESSTLLEKMSPGALSRVGVVSDTYSSAIRKAEEG
VGAHRGTVRRFLEKRYQQGAVHAGEAVGVLAGQGIGEPSTQMTLNTFHHA
GSSSAHVTLGIPRLRELLMTAAKYPKTPSMTIPVLGQRPEQKCEELSKKL
RLVRLSDLLLQVEVHEKSISFVPGVTRWALRTVALKMKFPPEEVYKDHLG
FGFGRIVQAVASEYVPHLHRIFEKEMLKISERKGIGIKTAIGCYLKSARK
PPTTNGKGANSDESCNGNLRDMGARLDDEDVNQEQSQEEIALTEAEEEEK
AIPSSSEDEDRSISGDEQQYDASTERKKSDENGNDGDLPSPITPRRSKKK
NGKRKMPKFKAVLSDDDEDMIEFGALGYVYSSVKGSERETVEFEWVLPMA
VLGKLNVSVLMKEIARAVSLSEVDRIQRCFIEFKDNQHNVITEGSNLREV
HELGWGLVDFDRLETNDLYGILQVYGVEALRAALIREFKEVFKAHGIPVN
IRHLSLIADYMTMNGTYRGFNRLSMWDSPGLFQRVTFETSMKFLRDATLD
GFEDITTNPSAAIALGQVYEGGTGGFQLLHTVN*

mRNA from alignment at tig00004400_pilon:1786974..1792025+

Legend: start_codonpolypeptideCDSexonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gchil2604.t1 ID=Gchil2604.t1|Name=Gchil2604.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=5052bp|location=Sequence derived from alignment at tig00004400_pilon:1786974..1792025+ (Gracilaria chilensis NLEC103_M9 male)
ATGGACGAAAACACCAGATGCTTGCGTTCTCTGGACATTGGCCACGCTGT
TTCAAAGTTTTCATTTCGCTTCTACTCAGAACAAGAAGCACGCAACCTAA
GCGTGCGCAGAATAACTTCTGCCGTATCATACGATGAACTTGGTCGCCCA
GTTCCCTATGGTTTATATGATCCAGTTTTTGGACCAACTTCTTTCGATGA
TGGCGCTTGTGCAACATGCGGGCTTACCTATGCTACTTGTCCCGGTCACT
TTGGCCATATTGAACTGCCAATTGCCTTACCCAATCCGCTATCATCTGCT
CTCGTTTTAAAGCTTCTTCGTTCTTCCTGCTGGAACTGTCACTGTCTGCG
CCTTTCTGAGTCTGATCTCTGCCTTTATTATGCGATACTTCTCTTCGAAG
ACGCTGATTTACCCCGCTGCGGCTTCGCGGTAGATGCCTATCGAAACCTA
CGAAAGAAAGTCGCCATTAAAATTGGAAAGCTTGAGTCGGAGCAAAGCCC
GATCGAGGCAACTGTATTTCAACCTGATCCAGACCGCAACTCTATCATCA
AGAACTGGCACGCATTTCTGCACGCCATGCCGCGGCCAATTCCCCAATAC
CTTGACGGTATCAATGTGTATGACACGGAAGCTGTTGAACGAGCAATGTT
GAAAGCTGCAAAAGCTTCATGGAGGCGAGCAAAGGATTCGAAGACACTAG
CTCGCCAACGTTCAAAAGGATGGAAAGCGATTCAGAGAATAATGCTAGAG
TCGTCTATCAAGTCTACGTGCACAAGTTGTGATCAAGACCCGGGCAAAAT
CAGACCAGGGGATCGCGGGCGCCTTTTCATAAAGCGGGGAGCTGCAAGTC
GTGACTTATTGCTCTCGCCAGCCGAGATAGAGACGCAGATTCGATCTTTG
TGGGAAGCACATTCAGAGCTTTTTGAATTACTTTATGGTTTGTGTGGCAG
AGAAGTTGATTCTAGTGAAAAAGCCCGCGGATACATGCGTTTGTTTGTTC
GTGTAGTTTTGGTTCCTCCTTCGAGGTTTCGCCCATCGGCTGTAGTTGGC
GAAATGTCTTATGCTGCCGAACATCCGCAAAATATCTTCTACCAACGCAT
CCTAACCCTGACGAAAACGTTGATGACTGCCAAGGGAAGCAGTGCGGAAG
AAGTAGAAGATGCTGACCTAGGAACTTCTGGTTCTGAAAAGAAGAAAAAG
AAAGATTCCGTTTCGAGCAGTGATATCGTGCAGTTGCTCTGTCGAATGCA
GCAGACATTGGGGGAACTTTATGACAATGACGGGAAAGGGCTGGATAAAT
CAACGGGCATACGACAGCAACTCGAAGCGAAAGCGGGTCTGTTCCGTCAA
CACATGATGGGAAAACGTGTAGATCATAGTTGCAGGTCTGTAATTGGCCC
AGATGTCTTCTTGGATACAAATGAAGTTGGCATACCCCTTAGCTTCGCCA
AGCAATTGACAATCCCAGAAGCGGTCATCCCCAGCAATCTAGAGCAGATG
AAGCAAGCAGTACTGAACGGTCCTGATAATTATCCGGGAGCAATGGCGGT
AGAAGGCTGGACTCTAAGCGGGGATCGACGAATGGTTAGACTGAATCGAG
CGGCTCGTGGAATTCGTCGAACGCAAGCTAGTCTGCTCATTCAAAACCGA
ATGCCGAATAGAAGCAGCAAGAAATATGGTTTCTCGGATCAAACTGAAGA
CATCAGTAGCAGCGTTCGTGTTGGGAACCAGATTCCAAAAGTAGTTCACA
GGCATTTGAAAACCGGTGATGTTGTGCTATTCAATCGGCAGCCTACTCTC
CACAGAGTTTCTATAATGGCTCATAAAGTGCGAGTTCTTCCTGGTGATCG
CACTATCAGGTTCCACTATGCAAACTGTGGGTCTTATAATGCAGATTTTG
ATGGGGATGAGATGAACGTACATGTTCCACAGGATTACATATCTCGAGCG
GAAGCGGAAGAGCTTATGTTGAGCAATAGGCACTACGTTGTCCCTACTTC
GGGAGCACCTGTACGGGGGCTCATTCAGGATCACATTGTCTCTGCGACCT
TACTAAGCCGACGAGACACTTTCTTAGATCGACAGACATTTACACAGTTG
CTCTACGTCGCTACAGAGAACATCATGTTGCGAACTGAAATGCACGGTAA
AACATATGAGCTTCAACCACCGGCAATTTTGAAACCAAAACACCTATGGA
CTGGAAAGCAGCTTATATCCGCCGTACTTGGAGTGATTCGGAATGGGCGA
CCTGGCTTTAATCTTGATGCAAGTTCGAAAACAACGGCAAACATTGTTGG
AGTGGAGGAATCAAAAATCCTAGTACGGGATGGTCACCTTTTGCGTGGTA
TCGTCGACAAAAGTTCCCTCGGTGCTTCCACGTTTGGTATTGTCCACGCT
ATTCAGGAAACTTATGGGTGCGATGCGTCAGATGATTTTTTGAGTTCCAT
GAGTCGCCTATGCTTATACTTTCTTCGACTCCATGGGCATACAACTGGCA
TTAGCGACCTTTTATTGAGGGAAGTTGGTGATACGCGAAGATTGAAAATT
CTGACCAAAGCATTGGACCATGTTGCAATTGAAGCAACCAATTCAGTATA
CCAAACAATGAACCAAAGCTCGAAATTGGGTGGAAAGCTTGCAAAGAGTG
GCACAGAGGCGAGGCAACTAATAGCTGAGATGGTTCAGAAGGATGGCGCT
GAAGCTGAGGATAGACTTGATGCAGCGATGAAGTCTTCCTTGAACAAGGT
TTCTTCAGATGTTTTCAGAGCATGCATTCCGATAGCTCTGTCGAAACCTT
TTCCGTTAAATGGGTTTGCTGTGATGACTAGTACTGGCGCAAAAGGCTCC
CCAGTTAATTCTGCTCAGATTTCTTGCCTTTTGGGGCAAACTAGTTTGGA
AGGGAAGCGCGTTCCGCGAATGGGAGGCAGAGGGGCCACTCTACCATGCT
TTGAGCCTTACGATGCATCACCGCTGGCTGGTGGTTTTATTGCAAGTCGA
TTCTTAACGGGCGTAAGCCCACAAGagttcttctttcacgctatgtctgg
tcgagaaggtctacttgacacatccctgaagacagctaattctggatatc
tgcaaagatgcctgataaagcatcttgaaggagtgcgattgcattatgat
ggaactgtgagggatAGCGACAGATCAGTCTTGCAATTCATTTACGGGGA
TGATGGAATCGATCCCTCGAAATCCTTATGGCTTACGAAGAAGGTTGACT
GGCAGGTATCTAACATCAAGAGTCTGGAGACCGAGGAGATCGATGATACG
AAGAGCCTGGGCCTGAAGGAAAGTGTTTATCTCTCAAACGAGGTAGGCGA
GAGCAGTACATTGCTGGAAAAAATGTCTCCTGGCGCACTTAGCCGGGTTG
GAGTAGTTTCTGATACTTACTCATCAGCTATTAGAAAGGCGGAGGAAGGG
GTTGGAGCGCACCGTGGTACTGTTCGGAGATTCCTGGAGAAAAGATATCA
ACAAGGGGCAGTTCATGCAGGTGAGGCTGTTGGTGTGCTTGCTGGGCAAG
GAATAGGAGAGCCTTCAACTCAAATGACCCTGAATACATTTCATCATGCA
GGGTCAAGCTCAGCTCATGTGACCCTCGGTATACCTCGTTTGCGAGAGCT
ACTCATGACAGCAGCGAAGTATCCCAAAACCCCAAGTATGACAATTCCTG
TGCTCGGACAGAGACCAGAACAGAAATGCGAGGAATTAAGCAAAAAGCTT
CGTCTTGTGAGACTCAGTGATTTACTGCTACAAGTCGAAGTACATGAAAA
GTCCATTAGCTTTGTTCCCGGTGTCACGCGATGGGCTCTAAGAACAGTGG
CTTTGAAGATGAAATTTCCACCTGAAGAGGTTTACAAGGATCATCTTGGG
TTCGGGTTCGGAAGAATTGTCCAAGCTGTGGCAAGTGAATATGTGCCACA
CTTGCACCGAATCTTTGAGAAAGAAATGCTCAAGATTTCAGAACGAAAAG
GAATAGGCATAAAGACGGCGATTGGATGTTATCTCAAAAGTGCTCGGAAA
CCCCCAACGACGAATGGTAAAGGTGCGAATAGTGATGAATCATGTAACGG
GAATCTGAGAGATATGGGTGCACGTTTGGATGATGAAGATGTCAACCAGG
AGCAGTCTCAGGAAGAAATCGCTTTAACTGAAGCCGAAGAGGAAGAAAAA
GCGATCCCGTCTTCATCAGAAGACGAAGATCGTTCCATTTCAGGCGATGA
GCAGCAATACGATGCCAGTACAGAGAGAAAGAAATCCGATGAAAACGGTA
ACGATGGTGACCTTCCTTCCCCAATCACTCCAAGGAGATCAAAGAAGAAA
AATGGAAAGCGCAAAATGCCCAAGTTCAAAGCAGTTCTCTCCGATGACGA
CGAAGATATGATAGAATTCGGAGCTTTGGGCTATGTGTACTCCTCCGTCA
AAGGCTCGGAGAGGGAAACCGTCGAATTTGAATGGGTTCTGCCTATGGCT
GTACTCGGTAAGCTGAATGTTTCAGTGCTGATGAAAGAAATAGCTCGCGC
AGTTAGCCTCTCCGAAGTCGATCGAATCCAAAGATGTTTCATAGAATTCA
AAGACAATCAACATAATGTGATAACAGAGGGGTCTAATCTCCGGGAAGTG
CATGAACTTGGATGGGGTCTGGTGGACTTTGATCGACTCGAGACCAACGA
TTTGTACGGGATCTTGCAAGTTTACGGTGTAGAAGCATTGAGAGCTGCTC
TGATCAGGGAATTCAAAGAAGTCTTCAAGGCCCACGGTATTCCAGTCAAC
ATTCGACATCTTTCTCTGATAGCAGACTATATGACTATGAATGGGACCTA
CCGAGGGTTTAATAGATTGAGTATGTGGGATTCGCCGGGATTGTTCCAGC
GCGTTACTTTCGAGACGAGCATGAAATTCCTGCGTGACGCAACCTTAGAT
GGTTTCGAAGACATCACGACCAACCCAAGTGCGGCCATTGCCTTGGGACA
AGTGTATGAGGGCGGCACAGGAGGGTTCCAGTTGCTTCACACAGTAAATT
AA

Coding sequence (CDS) from alignment at tig00004400_pilon:1786974..1792025+

>Gchil2604.t1 ID=Gchil2604.t1|Name=Gchil2604.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=5052bp|location=Sequence derived from alignment at tig00004400_pilon:1786974..1792025+ (Gracilaria chilensis NLEC103_M9 male)
ATGGACGAAAACACCAGATGCTTGCGTTCTCTGGACATTGGCCACGCTGT
TTCAAAGTTTTCATTTCGCTTCTACTCAGAACAAGAAGCACGCAACCTAA
GCGTGCGCAGAATAACTTCTGCCGTATCATACGATGAACTTGGTCGCCCA
GTTCCCTATGGTTTATATGATCCAGTTTTTGGACCAACTTCTTTCGATGA
TGGCGCTTGTGCAACATGCGGGCTTACCTATGCTACTTGTCCCGGTCACT
TTGGCCATATTGAACTGCCAATTGCCTTACCCAATCCGCTATCATCTGCT
CTCGTTTTAAAGCTTCTTCGTTCTTCCTGCTGGAACTGTCACTGTCTGCG
CCTTTCTGAGTCTGATCTCTGCCTTTATTATGCGATACTTCTCTTCGAAG
ACGCTGATTTACCCCGCTGCGGCTTCGCGGTAGATGCCTATCGAAACCTA
CGAAAGAAAGTCGCCATTAAAATTGGAAAGCTTGAGTCGGAGCAAAGCCC
GATCGAGGCAACTGTATTTCAACCTGATCCAGACCGCAACTCTATCATCA
AGAACTGGCACGCATTTCTGCACGCCATGCCGCGGCCAATTCCCCAATAC
CTTGACGGTATCAATGTGTATGACACGGAAGCTGTTGAACGAGCAATGTT
GAAAGCTGCAAAAGCTTCATGGAGGCGAGCAAAGGATTCGAAGACACTAG
CTCGCCAACGTTCAAAAGGATGGAAAGCGATTCAGAGAATAATGCTAGAG
TCGTCTATCAAGTCTACGTGCACAAGTTGTGATCAAGACCCGGGCAAAAT
CAGACCAGGGGATCGCGGGCGCCTTTTCATAAAGCGGGGAGCTGCAAGTC
GTGACTTATTGCTCTCGCCAGCCGAGATAGAGACGCAGATTCGATCTTTG
TGGGAAGCACATTCAGAGCTTTTTGAATTACTTTATGGTTTGTGTGGCAG
AGAAGTTGATTCTAGTGAAAAAGCCCGCGGATACATGCGTTTGTTTGTTC
GTGTAGTTTTGGTTCCTCCTTCGAGGTTTCGCCCATCGGCTGTAGTTGGC
GAAATGTCTTATGCTGCCGAACATCCGCAAAATATCTTCTACCAACGCAT
CCTAACCCTGACGAAAACGTTGATGACTGCCAAGGGAAGCAGTGCGGAAG
AAGTAGAAGATGCTGACCTAGGAACTTCTGGTTCTGAAAAGAAGAAAAAG
AAAGATTCCGTTTCGAGCAGTGATATCGTGCAGTTGCTCTGTCGAATGCA
GCAGACATTGGGGGAACTTTATGACAATGACGGGAAAGGGCTGGATAAAT
CAACGGGCATACGACAGCAACTCGAAGCGAAAGCGGGTCTGTTCCGTCAA
CACATGATGGGAAAACGTGTAGATCATAGTTGCAGGTCTGTAATTGGCCC
AGATGTCTTCTTGGATACAAATGAAGTTGGCATACCCCTTAGCTTCGCCA
AGCAATTGACAATCCCAGAAGCGGTCATCCCCAGCAATCTAGAGCAGATG
AAGCAAGCAGTACTGAACGGTCCTGATAATTATCCGGGAGCAATGGCGGT
AGAAGGCTGGACTCTAAGCGGGGATCGACGAATGGTTAGACTGAATCGAG
CGGCTCGTGGAATTCGTCGAACGCAAGCTAGTCTGCTCATTCAAAACCGA
ATGCCGAATAGAAGCAGCAAGAAATATGGTTTCTCGGATCAAACTGAAGA
CATCAGTAGCAGCGTTCGTGTTGGGAACCAGATTCCAAAAGTAGTTCACA
GGCATTTGAAAACCGGTGATGTTGTGCTATTCAATCGGCAGCCTACTCTC
CACAGAGTTTCTATAATGGCTCATAAAGTGCGAGTTCTTCCTGGTGATCG
CACTATCAGGTTCCACTATGCAAACTGTGGGTCTTATAATGCAGATTTTG
ATGGGGATGAGATGAACGTACATGTTCCACAGGATTACATATCTCGAGCG
GAAGCGGAAGAGCTTATGTTGAGCAATAGGCACTACGTTGTCCCTACTTC
GGGAGCACCTGTACGGGGGCTCATTCAGGATCACATTGTCTCTGCGACCT
TACTAAGCCGACGAGACACTTTCTTAGATCGACAGACATTTACACAGTTG
CTCTACGTCGCTACAGAGAACATCATGTTGCGAACTGAAATGCACGGTAA
AACATATGAGCTTCAACCACCGGCAATTTTGAAACCAAAACACCTATGGA
CTGGAAAGCAGCTTATATCCGCCGTACTTGGAGTGATTCGGAATGGGCGA
CCTGGCTTTAATCTTGATGCAAGTTCGAAAACAACGGCAAACATTGTTGG
AGTGGAGGAATCAAAAATCCTAGTACGGGATGGTCACCTTTTGCGTGGTA
TCGTCGACAAAAGTTCCCTCGGTGCTTCCACGTTTGGTATTGTCCACGCT
ATTCAGGAAACTTATGGGTGCGATGCGTCAGATGATTTTTTGAGTTCCAT
GAGTCGCCTATGCTTATACTTTCTTCGACTCCATGGGCATACAACTGGCA
TTAGCGACCTTTTATTGAGGGAAGTTGGTGATACGCGAAGATTGAAAATT
CTGACCAAAGCATTGGACCATGTTGCAATTGAAGCAACCAATTCAGTATA
CCAAACAATGAACCAAAGCTCGAAATTGGGTGGAAAGCTTGCAAAGAGTG
GCACAGAGGCGAGGCAACTAATAGCTGAGATGGTTCAGAAGGATGGCGCT
GAAGCTGAGGATAGACTTGATGCAGCGATGAAGTCTTCCTTGAACAAGGT
TTCTTCAGATGTTTTCAGAGCATGCATTCCGATAGCTCTGTCGAAACCTT
TTCCGTTAAATGGGTTTGCTGTGATGACTAGTACTGGCGCAAAAGGCTCC
CCAGTTAATTCTGCTCAGATTTCTTGCCTTTTGGGGCAAACTAGTTTGGA
AGGGAAGCGCGTTCCGCGAATGGGAGGCAGAGGGGCCACTCTACCATGCT
TTGAGCCTTACGATGCATCACCGCTGGCTGGTGGTTTTATTGCAAGTCGA
TTCTTAACGGGCGTAAGCCCACAAGagttcttctttcacgctatgtctgg
tcgagaaggtctacttgacacatccctgaagacagctaattctggatatc
tgcaaagatgcctgataaagcatcttgaaggagtgcgattgcattatgat
ggaactgtgagggatAGCGACAGATCAGTCTTGCAATTCATTTACGGGGA
TGATGGAATCGATCCCTCGAAATCCTTATGGCTTACGAAGAAGGTTGACT
GGCAGGTATCTAACATCAAGAGTCTGGAGACCGAGGAGATCGATGATACG
AAGAGCCTGGGCCTGAAGGAAAGTGTTTATCTCTCAAACGAGGTAGGCGA
GAGCAGTACATTGCTGGAAAAAATGTCTCCTGGCGCACTTAGCCGGGTTG
GAGTAGTTTCTGATACTTACTCATCAGCTATTAGAAAGGCGGAGGAAGGG
GTTGGAGCGCACCGTGGTACTGTTCGGAGATTCCTGGAGAAAAGATATCA
ACAAGGGGCAGTTCATGCAGGTGAGGCTGTTGGTGTGCTTGCTGGGCAAG
GAATAGGAGAGCCTTCAACTCAAATGACCCTGAATACATTTCATCATGCA
GGGTCAAGCTCAGCTCATGTGACCCTCGGTATACCTCGTTTGCGAGAGCT
ACTCATGACAGCAGCGAAGTATCCCAAAACCCCAAGTATGACAATTCCTG
TGCTCGGACAGAGACCAGAACAGAAATGCGAGGAATTAAGCAAAAAGCTT
CGTCTTGTGAGACTCAGTGATTTACTGCTACAAGTCGAAGTACATGAAAA
GTCCATTAGCTTTGTTCCCGGTGTCACGCGATGGGCTCTAAGAACAGTGG
CTTTGAAGATGAAATTTCCACCTGAAGAGGTTTACAAGGATCATCTTGGG
TTCGGGTTCGGAAGAATTGTCCAAGCTGTGGCAAGTGAATATGTGCCACA
CTTGCACCGAATCTTTGAGAAAGAAATGCTCAAGATTTCAGAACGAAAAG
GAATAGGCATAAAGACGGCGATTGGATGTTATCTCAAAAGTGCTCGGAAA
CCCCCAACGACGAATGGTAAAGGTGCGAATAGTGATGAATCATGTAACGG
GAATCTGAGAGATATGGGTGCACGTTTGGATGATGAAGATGTCAACCAGG
AGCAGTCTCAGGAAGAAATCGCTTTAACTGAAGCCGAAGAGGAAGAAAAA
GCGATCCCGTCTTCATCAGAAGACGAAGATCGTTCCATTTCAGGCGATGA
GCAGCAATACGATGCCAGTACAGAGAGAAAGAAATCCGATGAAAACGGTA
ACGATGGTGACCTTCCTTCCCCAATCACTCCAAGGAGATCAAAGAAGAAA
AATGGAAAGCGCAAAATGCCCAAGTTCAAAGCAGTTCTCTCCGATGACGA
CGAAGATATGATAGAATTCGGAGCTTTGGGCTATGTGTACTCCTCCGTCA
AAGGCTCGGAGAGGGAAACCGTCGAATTTGAATGGGTTCTGCCTATGGCT
GTACTCGGTAAGCTGAATGTTTCAGTGCTGATGAAAGAAATAGCTCGCGC
AGTTAGCCTCTCCGAAGTCGATCGAATCCAAAGATGTTTCATAGAATTCA
AAGACAATCAACATAATGTGATAACAGAGGGGTCTAATCTCCGGGAAGTG
CATGAACTTGGATGGGGTCTGGTGGACTTTGATCGACTCGAGACCAACGA
TTTGTACGGGATCTTGCAAGTTTACGGTGTAGAAGCATTGAGAGCTGCTC
TGATCAGGGAATTCAAAGAAGTCTTCAAGGCCCACGGTATTCCAGTCAAC
ATTCGACATCTTTCTCTGATAGCAGACTATATGACTATGAATGGGACCTA
CCGAGGGTTTAATAGATTGAGTATGTGGGATTCGCCGGGATTGTTCCAGC
GCGTTACTTTCGAGACGAGCATGAAATTCCTGCGTGACGCAACCTTAGAT
GGTTTCGAAGACATCACGACCAACCCAAGTGCGGCCATTGCCTTGGGACA
AGTGTATGAGGGCGGCACAGGAGGGTTCCAGTTGCTTCACACAGTAAATT
AA