Gchil2528.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil2528.t1
Unique NameGchil2528.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length560
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:1496620..1498299 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2528Gchil2528Gracilaria chilensis NLEC103_M9 malegenetig00004400_pilon 1496620..1498299 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2528.t1.stop1Gchil2528.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004400_pilon 1496620..1496622 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2528.t1.CDS1Gchil2528.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004400_pilon 1496620..1498299 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2528.t1.exon1Gchil2528.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004400_pilon 1496620..1498299 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2528.t1.start1Gchil2528.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004400_pilon 1498297..1498299 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2528.t1Gchil2528.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004400_pilon 1496620..1498299 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil2528.t1 ID=Gchil2528.t1|Name=Gchil2528.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=560bp
MANSRISFAGLLAFFERESCEHASSNDVSKQSAKADSQNTESNVVQKDGI
NEKQELGSIVEDLMEEIFAHLRDRNMSITEQLYSAARGDTADGARVNVSR
EVLKREIVLALANSFQSRSEKNAGVTNSERDQATINSLKRCLHDMTCRAT
DAEETLELELNDKIIVMFTCEQYKERSKELASALRKRNNEVYGLTAKNAS
LAKMVQSMEEEIERLRKAVHAGDVKALQAQHDAEMAHLLAKQATLQSKLL
EKQLQEAERSSNTIHAQAEELQREQRGIRTLLVNNLDRQEARNVRGQFGV
QVEALVRKGSTALGRVGATLTRNATERRGVGANELGTPSERRNNDNSNNC
SVPSNAGQLPVDSPSSSRNAGEATPRPGISRKLTARFRRNGGNVGEHAAS
ETQGKRGPVLDGLRNLKRPNHRTENNPGSVPTANEGASMLRHFRRIFSMG
SGSGRSGQRSQRSGYTDHDNGVSKTSKKLDALDKNLETLQDIAGSKQKEV
SRLREELRAAKHQSDALEQRLRTEQYKRVAAERSRSFAQLDPVADAENAE
AVRSDRADE*
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spliced messenger RNA

>Gchil2528.t1 ID=Gchil2528.t1|Name=Gchil2528.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1680bp|location=Sequence derived from alignment at tig00004400_pilon:1496620..1498299- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGAACTCAAGGATATCTTTTGCTGGTTTGCTAGCTTTTTTCGAGCG
TGAATCTTGTGAACATGCTTCAAGTAACGATGTTTCGAAGCAGTCTGCCA
AGGCCGATTCTCAGAACACAGAATCAAACGTTGTTCAGAAGGACGGTATT
AATGAAAAGCAAGAATTAGGCTCGATTGTGGAAGACTTAATGGAGGAAAT
CTTTGCTCACCTACGAGATCGTAACATGAGCATCACTGAGCAACTTTACT
CCGCAGCGAGAGGCGACACGGCGGATGGAGCAAGAGTGAACGTGTCGAGA
GAGGTTCTTAAAAGAGAGATTGTGCTCGCTCTGGCAAACAGTTTCCAGTC
TCGTTCCGAAAAGAACGCCGGCGTTACCAACTCGGAAAGAGACCAAGCTA
CCATCAATTCGTTGAAACGTTGCCTCCACGATATGACATGCAGAGCTACG
GATGCCGAAGAGACTCTAGAACTGGAATTGAACGATAAAATCATTGTAAT
GTTTACTTGTGAACAGTACAAGGAGAGGAGCAAAGAGCTAGCGTCGGCGC
TGCGCAAAAGGAATAACGAGGTGTATGGCCTGACTGCGAAGAATGCTTCT
CTCGCAAAAATGGTTCAGAGTATGGAAGAAGAGATCGAGCGTCTCCGGAA
GGCCGTCCATGCTGGAGACGTCAAAGCCCTCCAAGCTCAACATGACGCAG
AAATGGCCCATCTACTAGCGAAACAGGCCACTTTGCAATCGAAGCTTTTA
GAGAAGCAGCTTCAGGAAGCTGAGCGCTCCTCCAACACTATTCACGCACA
GGCAGAAGAACTACAGCGTGAGCAAAGGGGGATAAGGACGCTTCTGGTGA
ACAATTTGGATCGACAAGAGGCACGCAACGTCAGAGGCCAATTCGGAGTC
CAGGTAGAAGCTCTTGTTCGCAAAGGCTCCACGGCTCTGGGTCGAGTGGG
AGCCACACTCACCCGGAATGCAACGGAACGGCGGGGAGTTGGCGCAAATG
AACTCGGAACACCGTCTGAAAGGCGAAACAACGATAACTCTAACAATTGT
TCTGTGCCAAGCAATGCTGGTCAGCTCCCTGTGGACAGTCCATCATCATC
TAGAAATGCCGGCGAAGCCACGCCTCGACCAGGAATATCCCGCAAGCTGA
CGGCCCGTTTTCGACGAAACGGGGGAAACGTCGGAGAGCATGCAGCCTCG
GAAACACAGGGGAAACGAGGGCCAGTCTTGGATGGACTTCGAAACCTCAA
ACGCCCAAACCACAGAACCGAAAATAATCCTGGCTCAGTGCCAACTGCAA
ATGAGGGCGCCTCGATGCTTCGGCACTTCCGAAGGATTTTTTCGATGGGA
TCGGGTTCTGGACGAAGTGGGCAGCGAAGCCAGCGTTCTGGATACACAGA
CCATGACAATGGTGTGTCAAAAACATCAAAGAAGTTGGATGCACTAGACA
AAAACCTGGAAACACTGCAGGACATCGCGGGGAGCAAACAAAAAGAAGTT
AGCAGACTTCGTGAGGAGTTGCGAGCTGCAAAACATCAATCGGATGCTCT
CGAGCAGCGTTTGAGAACGGAACAATACAAACGTGTTGCGGCGGAACGCA
GTCGATCTTTCGCTCAATTAGATCCGGTGGCAGATGCTGAAAACGCTGAG
GCTGTCCGCAGCGACAGAGCTGATGAATAG
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protein sequence of Gchil2528.t1

>Gchil2528.t1 ID=Gchil2528.t1|Name=Gchil2528.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=560bp
MANSRISFAGLLAFFERESCEHASSNDVSKQSAKADSQNTESNVVQKDGI
NEKQELGSIVEDLMEEIFAHLRDRNMSITEQLYSAARGDTADGARVNVSR
EVLKREIVLALANSFQSRSEKNAGVTNSERDQATINSLKRCLHDMTCRAT
DAEETLELELNDKIIVMFTCEQYKERSKELASALRKRNNEVYGLTAKNAS
LAKMVQSMEEEIERLRKAVHAGDVKALQAQHDAEMAHLLAKQATLQSKLL
EKQLQEAERSSNTIHAQAEELQREQRGIRTLLVNNLDRQEARNVRGQFGV
QVEALVRKGSTALGRVGATLTRNATERRGVGANELGTPSERRNNDNSNNC
SVPSNAGQLPVDSPSSSRNAGEATPRPGISRKLTARFRRNGGNVGEHAAS
ETQGKRGPVLDGLRNLKRPNHRTENNPGSVPTANEGASMLRHFRRIFSMG
SGSGRSGQRSQRSGYTDHDNGVSKTSKKLDALDKNLETLQDIAGSKQKEV
SRLREELRAAKHQSDALEQRLRTEQYKRVAAERSRSFAQLDPVADAENAE
AVRSDRADE*
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mRNA from alignment at tig00004400_pilon:1496620..1498299-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil2528.t1 ID=Gchil2528.t1|Name=Gchil2528.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1680bp|location=Sequence derived from alignment at tig00004400_pilon:1496620..1498299- (Gracilaria chilensis NLEC103_M9 male)
ATGGCGAACTCAAGGATATCTTTTGCTGGTTTGCTAGCTTTTTTCGAGCG
TGAATCTTGTGAACATGCTTCAAGTAACGATGTTTCGAAGCAGTCTGCCA
AGGCCGATTCTCAGAACACAGAATCAAACGTTGTTCAGAAGGACGGTATT
AATGAAAAGCAAGAATTAGGCTCGATTGTGGAAGACTTAATGGAGGAAAT
CTTTGCTCACCTACGAGATCGTAACATGAGCATCACTGAGCAACTTTACT
CCGCAGCGAGAGGCGACACGGCGGATGGAGCAAGAGTGAACGTGTCGAGA
GAGGTTCTTAAAAGAGAGATTGTGCTCGCTCTGGCAAACAGTTTCCAGTC
TCGTTCCGAAAAGAACGCCGGCGTTACCAACTCGGAAAGAGACCAAGCTA
CCATCAATTCGTTGAAACGTTGCCTCCACGATATGACATGCAGAGCTACG
GATGCCGAAGAGACTCTAGAACTGGAATTGAACGATAAAATCATTGTAAT
GTTTACTTGTGAACAGTACAAGGAGAGGAGCAAAGAGCTAGCGTCGGCGC
TGCGCAAAAGGAATAACGAGGTGTATGGCCTGACTGCGAAGAATGCTTCT
CTCGCAAAAATGGTTCAGAGTATGGAAGAAGAGATCGAGCGTCTCCGGAA
GGCCGTCCATGCTGGAGACGTCAAAGCCCTCCAAGCTCAACATGACGCAG
AAATGGCCCATCTACTAGCGAAACAGGCCACTTTGCAATCGAAGCTTTTA
GAGAAGCAGCTTCAGGAAGCTGAGCGCTCCTCCAACACTATTCACGCACA
GGCAGAAGAACTACAGCGTGAGCAAAGGGGGATAAGGACGCTTCTGGTGA
ACAATTTGGATCGACAAGAGGCACGCAACGTCAGAGGCCAATTCGGAGTC
CAGGTAGAAGCTCTTGTTCGCAAAGGCTCCACGGCTCTGGGTCGAGTGGG
AGCCACACTCACCCGGAATGCAACGGAACGGCGGGGAGTTGGCGCAAATG
AACTCGGAACACCGTCTGAAAGGCGAAACAACGATAACTCTAACAATTGT
TCTGTGCCAAGCAATGCTGGTCAGCTCCCTGTGGACAGTCCATCATCATC
TAGAAATGCCGGCGAAGCCACGCCTCGACCAGGAATATCCCGCAAGCTGA
CGGCCCGTTTTCGACGAAACGGGGGAAACGTCGGAGAGCATGCAGCCTCG
GAAACACAGGGGAAACGAGGGCCAGTCTTGGATGGACTTCGAAACCTCAA
ACGCCCAAACCACAGAACCGAAAATAATCCTGGCTCAGTGCCAACTGCAA
ATGAGGGCGCCTCGATGCTTCGGCACTTCCGAAGGATTTTTTCGATGGGA
TCGGGTTCTGGACGAAGTGGGCAGCGAAGCCAGCGTTCTGGATACACAGA
CCATGACAATGGTGTGTCAAAAACATCAAAGAAGTTGGATGCACTAGACA
AAAACCTGGAAACACTGCAGGACATCGCGGGGAGCAAACAAAAAGAAGTT
AGCAGACTTCGTGAGGAGTTGCGAGCTGCAAAACATCAATCGGATGCTCT
CGAGCAGCGTTTGAGAACGGAACAATACAAACGTGTTGCGGCGGAACGCA
GTCGATCTTTCGCTCAATTAGATCCGGTGGCAGATGCTGAAAACGCTGAG
GCTGTCCGCAGCGACAGAGCTGATGAATAG
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Coding sequence (CDS) from alignment at tig00004400_pilon:1496620..1498299-

>Gchil2528.t1 ID=Gchil2528.t1|Name=Gchil2528.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1680bp|location=Sequence derived from alignment at tig00004400_pilon:1496620..1498299- (Gracilaria chilensis NLEC103_M9 male)
ATGGCGAACTCAAGGATATCTTTTGCTGGTTTGCTAGCTTTTTTCGAGCG
TGAATCTTGTGAACATGCTTCAAGTAACGATGTTTCGAAGCAGTCTGCCA
AGGCCGATTCTCAGAACACAGAATCAAACGTTGTTCAGAAGGACGGTATT
AATGAAAAGCAAGAATTAGGCTCGATTGTGGAAGACTTAATGGAGGAAAT
CTTTGCTCACCTACGAGATCGTAACATGAGCATCACTGAGCAACTTTACT
CCGCAGCGAGAGGCGACACGGCGGATGGAGCAAGAGTGAACGTGTCGAGA
GAGGTTCTTAAAAGAGAGATTGTGCTCGCTCTGGCAAACAGTTTCCAGTC
TCGTTCCGAAAAGAACGCCGGCGTTACCAACTCGGAAAGAGACCAAGCTA
CCATCAATTCGTTGAAACGTTGCCTCCACGATATGACATGCAGAGCTACG
GATGCCGAAGAGACTCTAGAACTGGAATTGAACGATAAAATCATTGTAAT
GTTTACTTGTGAACAGTACAAGGAGAGGAGCAAAGAGCTAGCGTCGGCGC
TGCGCAAAAGGAATAACGAGGTGTATGGCCTGACTGCGAAGAATGCTTCT
CTCGCAAAAATGGTTCAGAGTATGGAAGAAGAGATCGAGCGTCTCCGGAA
GGCCGTCCATGCTGGAGACGTCAAAGCCCTCCAAGCTCAACATGACGCAG
AAATGGCCCATCTACTAGCGAAACAGGCCACTTTGCAATCGAAGCTTTTA
GAGAAGCAGCTTCAGGAAGCTGAGCGCTCCTCCAACACTATTCACGCACA
GGCAGAAGAACTACAGCGTGAGCAAAGGGGGATAAGGACGCTTCTGGTGA
ACAATTTGGATCGACAAGAGGCACGCAACGTCAGAGGCCAATTCGGAGTC
CAGGTAGAAGCTCTTGTTCGCAAAGGCTCCACGGCTCTGGGTCGAGTGGG
AGCCACACTCACCCGGAATGCAACGGAACGGCGGGGAGTTGGCGCAAATG
AACTCGGAACACCGTCTGAAAGGCGAAACAACGATAACTCTAACAATTGT
TCTGTGCCAAGCAATGCTGGTCAGCTCCCTGTGGACAGTCCATCATCATC
TAGAAATGCCGGCGAAGCCACGCCTCGACCAGGAATATCCCGCAAGCTGA
CGGCCCGTTTTCGACGAAACGGGGGAAACGTCGGAGAGCATGCAGCCTCG
GAAACACAGGGGAAACGAGGGCCAGTCTTGGATGGACTTCGAAACCTCAA
ACGCCCAAACCACAGAACCGAAAATAATCCTGGCTCAGTGCCAACTGCAA
ATGAGGGCGCCTCGATGCTTCGGCACTTCCGAAGGATTTTTTCGATGGGA
TCGGGTTCTGGACGAAGTGGGCAGCGAAGCCAGCGTTCTGGATACACAGA
CCATGACAATGGTGTGTCAAAAACATCAAAGAAGTTGGATGCACTAGACA
AAAACCTGGAAACACTGCAGGACATCGCGGGGAGCAAACAAAAAGAAGTT
AGCAGACTTCGTGAGGAGTTGCGAGCTGCAAAACATCAATCGGATGCTCT
CGAGCAGCGTTTGAGAACGGAACAATACAAACGTGTTGCGGCGGAACGCA
GTCGATCTTTCGCTCAATTAGATCCGGTGGCAGATGCTGAAAACGCTGAG
GCTGTCCGCAGCGACAGAGCTGATGAATAG
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