Gchil2422.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gchil2422.t1
Unique Name	Gchil2422.t1
Type	mRNA
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	525

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004400_pilon	contig	tig00004400_pilon:841549..843123 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	45157.CMS484CT
Preferred name	GUK1
PFAMs	Guanylate_kin
Max annot lvl	2759\|Eukaryota
KEGG rclass	RC00002,RC00649
KEGG ko	ko:K00942,ko:K11151,ko:K15538
KEGG Reaction	R00332,R02090,R03048,R08379,R08380
KEGG Pathway	ko00230,ko00830,ko01100,map00230,map00830,map01100
KEGG Module	M00050
GOs	GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006185,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009151,GO:0009152,GO:0009153,GO:0009161,GO:0009162,GO:0009163,GO:0009165,GO:0009167,GO:0009170,GO:0009179,GO:0009180,GO:0009182,GO:0009183,GO:0009185,GO:0009186,GO:0009188,GO:0009189,GO:0009199,GO:0009200,GO:0009201,GO:0009205,GO:0009206,GO:0009215,GO:0009225,GO:0009259,GO:0009260,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015031,GO:0015833,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017144,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019673,GO:0019692,GO:0019693,GO:0033036,GO:0034404,GO:0034436,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046034,GO:0046037,GO:0046039,GO:0046054,GO:0046060,GO:0046066,GO:0046128,GO:0046129,GO:0046385,GO:0046390,GO:0046483,GO:0046710,GO:0046711,GO:0046939,GO:0046940,GO:0050145,GO:0051179,GO:0051234,GO:0055086,GO:0071702,GO:0071704,GO:0071705,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901264,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
Evalue	1.35e-59
EggNOG OGs	COG0194@1\|root,KOG0707@2759\|Eukaryota
EC	2.7.4.8,3.2.1.130
Description	guanylate kinase activity
COG category	F
CAZy	GH99
BRITE	ko00000,ko00001,ko00002,ko01000

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil2422	Gchil2422	Gracilaria chilensis NLEC103_M9 male	gene	tig00004400_pilon 841549..843123 +

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil2422.t1.start1	Gchil2422.t1.start1	Gracilaria chilensis NLEC103_M9 male	start_codon	tig00004400_pilon 841549..841551 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil2422.t1.CDS1	Gchil2422.t1.CDS1	Gracilaria chilensis NLEC103_M9 male	CDS	tig00004400_pilon 841549..843123 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil2422.t1.exon1	Gchil2422.t1.exon1	Gracilaria chilensis NLEC103_M9 male	exon	tig00004400_pilon 841549..843123 +

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil2422.t1.stop1	Gchil2422.t1.stop1	Gracilaria chilensis NLEC103_M9 male	stop_codon	tig00004400_pilon 843121..843123 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil2422.t1	Gchil2422.t1	Gracilaria chilensis NLEC103_M9 male	polypeptide	tig00004400_pilon 841549..843123 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00004400_pilon:841549..843123+
coding sequence from alignment at tig00004400_pilon:841549..843123+

mRNA sequence

>Gchil2422.t1 ID=Gchil2422.t1|Name=Gchil2422.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=525bp
MSSTLITAFLPAVPLALERTTSVHQTSSQRPASFRPSRSPIRASTAADER
LDSRGFVVPQPGDVVLYAGRWAGEQNAGVVDSVRDAQQRVIVDVQEMRRL
SNDLFAVQAARNRKLRWFDVAQIRVARDAVYVPGQDAYRIPNVPDGYAYV
KPMDDEARERAAVEYRKLKSNLLNTTLTIAAAGTLLSAALFGKNLATAYT
CGAAASVAYLVMLQGSVDALGSPTFFSRFLSFRFALLPLPFVLLAFSNGA
RSPSDMLGILDRRQAIAIVLGLLTYKVPFLARTFNEFVDSLSRIEIGKTG
MIGTVAALAARQIKRLQQDADDATQTETLISKPVFVFAGPSGVGKSTLIH
KLMDEFPLKFQYSVSHTTREPRSNELDGEDYIFITHQEFEDMIKSNRFVE
YAHVHGQYYGTSYDAVKAVLEKQTFCVLDLDIQGVEALRNKADLSWQPIF
VWIAPPNVSALEDRLKNRGTETSQTMKTRLTTAMREMSFAATSNIFDLTI
INDNLDEAYAQLHKFIEYQTKPFS*

spliced messenger RNA

>Gchil2422.t1 ID=Gchil2422.t1|Name=Gchil2422.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1575bp|location=Sequence derived from alignment at tig00004400_pilon:841549..843123+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTTCTACGCTCATCACAGCTTTTTTGCCTGCCGTTCCGCTGGCATT
AGAGCGAACAACCTCTGTTCATCAAACGAGCTCGCAGCGCCCAGCTTCCT
TCCGCCCATCACGCTCCCCAATTCGCGCGTCGACGGCGGCTGATGAACGC
CTTGATTCTCGTGGATTCGTCGTACCGCAACCAGGGGACGTAGTTCTTTA
CGCCGGGAGATGGGCAGGGGAGCAAAATGCGGGTGTGGTAGACAGCGTAA
GAGACGCTCAGCAACGAGTGATTGTCGACGTTCAAGAGATGCGTCGACTG
AGCAATGATCTTTTTGCCGTACAAGCTGCGCGGAATAGAAAGCTCAGGTG
GTTTGATGTGGCTCAAATTCGTGTCGCTCGCGATGCCGTCTATGTTCCAG
GTCAGGACGCGTATCGCATTCCAAACGTGCCTGACGGATATGCATATGTG
AAACCCATGGATGACGAAGCTCGTGAGCGTGCTGCCGTAGAGTACCGAAA
ACTCAAGTCCAATTTATTGAACACCACGCTAACCATTGCAGCCGCAGGGA
CTCTTCTTTCAGCCGCATTGTTTGGAAAGAACCTAGCTACAGCGTATACA
TGTGGCGCAGCGGCTTCCGTAGCATATCTAGTAATGTTGCAAGGCAGTGT
AGATGCGCTTGGTAGCCCTACCTTTTTCTCCCGATTTCTTTCATTTCGAT
TCGCCCTTCTGCCGCTGCCGTTTGTTCTCCTCGCTTTCTCGAACGGGGCT
AGATCGCCGTCAGATATGTTGGGAATTCTTGATCGAAGGCAAGCGATTGC
TATTGTCTTAGGCCTGCTAACATACAAGGTTCCATTTCTTGCTCGCACGT
TCAATGAATTTGTGGACAGTCTTTCCCGAATTGAAATAGGAAAGACAGGC
ATGATCGGCACGGTAGCGGCACTTGCCGCCCGGCAGATCAAGAGGTTGCA
GCAAGATGCTGATGATGCTACACAAACTGAAACGCTAATATCCAAACCTG
TCTTTGTGTTTGCAGGACCATCCGGAGTTGGCAAATCAACGTTGATACAC
AAACTCATGGATGAATTCCCTCTAAAGTTTCAATACAGTGTCTCTCACAC
TACACGTGAACCACGCTCGAATGAACTTGATGGTGAAGATTACATTTTTA
TCACACATCAAGAGTTCGAAGATATGATAAAGTCAAATCGGTTTGTGGAG
TATGCCCACGTTCATGGGCAGTACTATGGTACATCTTATGATGCTGTGAA
GGCCGTTTTGGAGAAACAAACATTTTGCGTATTAGACTTGGATATCCAGG
GAGTTGAAGCTCTGCGAAACAAAGCTGACTTATCCTGGCAACCTATCTTT
GTGTGGATAGCACCGCCTAATGTGTCTGCCCTGGAAGACCGGTTGAAGAA
TCGCGGAACTGAGACGAGCCAAACAATGAAGACACGGCTTACCACAGCAA
TGAGAGAAATGTCGTTTGCGGCCACAAGCAATATTTTTGATTTAACAATT
ATTAACGACAACTTGGATGAAGCATATGCACAACTCCATAAGTTTATAGA
GTATCAAACTAAGCCTTTTTCATGA

protein sequence of Gchil2422.t1

>Gchil2422.t1 ID=Gchil2422.t1|Name=Gchil2422.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=525bp
MSSTLITAFLPAVPLALERTTSVHQTSSQRPASFRPSRSPIRASTAADER
LDSRGFVVPQPGDVVLYAGRWAGEQNAGVVDSVRDAQQRVIVDVQEMRRL
SNDLFAVQAARNRKLRWFDVAQIRVARDAVYVPGQDAYRIPNVPDGYAYV
KPMDDEARERAAVEYRKLKSNLLNTTLTIAAAGTLLSAALFGKNLATAYT
CGAAASVAYLVMLQGSVDALGSPTFFSRFLSFRFALLPLPFVLLAFSNGA
RSPSDMLGILDRRQAIAIVLGLLTYKVPFLARTFNEFVDSLSRIEIGKTG
MIGTVAALAARQIKRLQQDADDATQTETLISKPVFVFAGPSGVGKSTLIH
KLMDEFPLKFQYSVSHTTREPRSNELDGEDYIFITHQEFEDMIKSNRFVE
YAHVHGQYYGTSYDAVKAVLEKQTFCVLDLDIQGVEALRNKADLSWQPIF
VWIAPPNVSALEDRLKNRGTETSQTMKTRLTTAMREMSFAATSNIFDLTI
INDNLDEAYAQLHKFIEYQTKPFS*

mRNA from alignment at tig00004400_pilon:841549..843123+

Legend: start_codonpolypeptideCDSexonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gchil2422.t1 ID=Gchil2422.t1|Name=Gchil2422.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1575bp|location=Sequence derived from alignment at tig00004400_pilon:841549..843123+ (Gracilaria chilensis NLEC103_M9 male)
ATGTCTTCTACGCTCATCACAGCTTTTTTGCCTGCCGTTCCGCTGGCATT
AGAGCGAACAACCTCTGTTCATCAAACGAGCTCGCAGCGCCCAGCTTCCT
TCCGCCCATCACGCTCCCCAATTCGCGCGTCGACGGCGGCTGATGAACGC
CTTGATTCTCGTGGATTCGTCGTACCGCAACCAGGGGACGTAGTTCTTTA
CGCCGGGAGATGGGCAGGGGAGCAAAATGCGGGTGTGGTAGACAGCGTAA
GAGACGCTCAGCAACGAGTGATTGTCGACGTTCAAGAGATGCGTCGACTG
AGCAATGATCTTTTTGCCGTACAAGCTGCGCGGAATAGAAAGCTCAGGTG
GTTTGATGTGGCTCAAATTCGTGTCGCTCGCGATGCCGTCTATGTTCCAG
GTCAGGACGCGTATCGCATTCCAAACGTGCCTGACGGATATGCATATGTG
AAACCCATGGATGACGAAGCTCGTGAGCGTGCTGCCGTAGAGTACCGAAA
ACTCAAGTCCAATTTATTGAACACCACGCTAACCATTGCAGCCGCAGGGA
CTCTTCTTTCAGCCGCATTGTTTGGAAAGAACCTAGCTACAGCGTATACA
TGTGGCGCAGCGGCTTCCGTAGCATATCTAGTAATGTTGCAAGGCAGTGT
AGATGCGCTTGGTAGCCCTACCTTTTTCTCCCGATTTCTTTCATTTCGAT
TCGCCCTTCTGCCGCTGCCGTTTGTTCTCCTCGCTTTCTCGAACGGGGCT
AGATCGCCGTCAGATATGTTGGGAATTCTTGATCGAAGGCAAGCGATTGC
TATTGTCTTAGGCCTGCTAACATACAAGGTTCCATTTCTTGCTCGCACGT
TCAATGAATTTGTGGACAGTCTTTCCCGAATTGAAATAGGAAAGACAGGC
ATGATCGGCACGGTAGCGGCACTTGCCGCCCGGCAGATCAAGAGGTTGCA
GCAAGATGCTGATGATGCTACACAAACTGAAACGCTAATATCCAAACCTG
TCTTTGTGTTTGCAGGACCATCCGGAGTTGGCAAATCAACGTTGATACAC
AAACTCATGGATGAATTCCCTCTAAAGTTTCAATACAGTGTCTCTCACAC
TACACGTGAACCACGCTCGAATGAACTTGATGGTGAAGATTACATTTTTA
TCACACATCAAGAGTTCGAAGATATGATAAAGTCAAATCGGTTTGTGGAG
TATGCCCACGTTCATGGGCAGTACTATGGTACATCTTATGATGCTGTGAA
GGCCGTTTTGGAGAAACAAACATTTTGCGTATTAGACTTGGATATCCAGG
GAGTTGAAGCTCTGCGAAACAAAGCTGACTTATCCTGGCAACCTATCTTT
GTGTGGATAGCACCGCCTAATGTGTCTGCCCTGGAAGACCGGTTGAAGAA
TCGCGGAACTGAGACGAGCCAAACAATGAAGACACGGCTTACCACAGCAA
TGAGAGAAATGTCGTTTGCGGCCACAAGCAATATTTTTGATTTAACAATT
ATTAACGACAACTTGGATGAAGCATATGCACAACTCCATAAGTTTATAGA
GTATCAAACTAAGCCTTTTTCATGA

Coding sequence (CDS) from alignment at tig00004400_pilon:841549..843123+

>Gchil2422.t1 ID=Gchil2422.t1|Name=Gchil2422.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1575bp|location=Sequence derived from alignment at tig00004400_pilon:841549..843123+ (Gracilaria chilensis NLEC103_M9 male)
ATGTCTTCTACGCTCATCACAGCTTTTTTGCCTGCCGTTCCGCTGGCATT
AGAGCGAACAACCTCTGTTCATCAAACGAGCTCGCAGCGCCCAGCTTCCT
TCCGCCCATCACGCTCCCCAATTCGCGCGTCGACGGCGGCTGATGAACGC
CTTGATTCTCGTGGATTCGTCGTACCGCAACCAGGGGACGTAGTTCTTTA
CGCCGGGAGATGGGCAGGGGAGCAAAATGCGGGTGTGGTAGACAGCGTAA
GAGACGCTCAGCAACGAGTGATTGTCGACGTTCAAGAGATGCGTCGACTG
AGCAATGATCTTTTTGCCGTACAAGCTGCGCGGAATAGAAAGCTCAGGTG
GTTTGATGTGGCTCAAATTCGTGTCGCTCGCGATGCCGTCTATGTTCCAG
GTCAGGACGCGTATCGCATTCCAAACGTGCCTGACGGATATGCATATGTG
AAACCCATGGATGACGAAGCTCGTGAGCGTGCTGCCGTAGAGTACCGAAA
ACTCAAGTCCAATTTATTGAACACCACGCTAACCATTGCAGCCGCAGGGA
CTCTTCTTTCAGCCGCATTGTTTGGAAAGAACCTAGCTACAGCGTATACA
TGTGGCGCAGCGGCTTCCGTAGCATATCTAGTAATGTTGCAAGGCAGTGT
AGATGCGCTTGGTAGCCCTACCTTTTTCTCCCGATTTCTTTCATTTCGAT
TCGCCCTTCTGCCGCTGCCGTTTGTTCTCCTCGCTTTCTCGAACGGGGCT
AGATCGCCGTCAGATATGTTGGGAATTCTTGATCGAAGGCAAGCGATTGC
TATTGTCTTAGGCCTGCTAACATACAAGGTTCCATTTCTTGCTCGCACGT
TCAATGAATTTGTGGACAGTCTTTCCCGAATTGAAATAGGAAAGACAGGC
ATGATCGGCACGGTAGCGGCACTTGCCGCCCGGCAGATCAAGAGGTTGCA
GCAAGATGCTGATGATGCTACACAAACTGAAACGCTAATATCCAAACCTG
TCTTTGTGTTTGCAGGACCATCCGGAGTTGGCAAATCAACGTTGATACAC
AAACTCATGGATGAATTCCCTCTAAAGTTTCAATACAGTGTCTCTCACAC
TACACGTGAACCACGCTCGAATGAACTTGATGGTGAAGATTACATTTTTA
TCACACATCAAGAGTTCGAAGATATGATAAAGTCAAATCGGTTTGTGGAG
TATGCCCACGTTCATGGGCAGTACTATGGTACATCTTATGATGCTGTGAA
GGCCGTTTTGGAGAAACAAACATTTTGCGTATTAGACTTGGATATCCAGG
GAGTTGAAGCTCTGCGAAACAAAGCTGACTTATCCTGGCAACCTATCTTT
GTGTGGATAGCACCGCCTAATGTGTCTGCCCTGGAAGACCGGTTGAAGAA
TCGCGGAACTGAGACGAGCCAAACAATGAAGACACGGCTTACCACAGCAA
TGAGAGAAATGTCGTTTGCGGCCACAAGCAATATTTTTGATTTAACAATT
ATTAACGACAACTTGGATGAAGCATATGCACAACTCCATAAGTTTATAGA
GTATCAAACTAAGCCTTTTTCATGA