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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 45157.CMN138CT |
| Preferred name | FIGNL1 |
| PFAMs | AAA,Vps4_C |
| Max annot lvl | 2759|Eukaryota |
| GOs | GO:0000003,GO:0000018,GO:0000070,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000287,GO:0000819,GO:0001503,GO:0001649,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006163,GO:0006282,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007059,GO:0007140,GO:0007276,GO:0008150,GO:0008152,GO:0008283,GO:0008568,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009314,GO:0009611,GO:0009628,GO:0009966,GO:0009968,GO:0009987,GO:0010212,GO:0010569,GO:0010646,GO:0010648,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0019219,GO:0019222,GO:0019637,GO:0019693,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0023051,GO:0023057,GO:0030154,GO:0031110,GO:0031114,GO:0031323,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032886,GO:0033043,GO:0033687,GO:0034641,GO:0042623,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043244,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046034,GO:0046483,GO:0046872,GO:0048232,GO:0048285,GO:0048471,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048609,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051013,GO:0051052,GO:0051128,GO:0051171,GO:0051276,GO:0051321,GO:0051493,GO:0051704,GO:0051716,GO:0051726,GO:0055086,GO:0060255,GO:0060548,GO:0065007,GO:0070013,GO:0070507,GO:0071214,GO:0071478,GO:0071479,GO:0071704,GO:0071840,GO:0072521,GO:0080090,GO:0080134,GO:0080135,GO:0098813,GO:0104004,GO:0140013,GO:0140014,GO:0140096,GO:1901135,GO:1901360,GO:1901564,GO:1901879,GO:1902531,GO:1902532,GO:1902903,GO:1903046,GO:1903047,GO:2000779,GO:2001020,GO:2001233,GO:2001234,GO:2001242,GO:2001243 |
| Evalue | 6.87e-125 |
| EggNOG OGs | COG0464@1|root,KOG0740@2759|Eukaryota |
| Description | Belongs to the AAA ATPase family |
| COG category | O |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil2347.t1 ID=Gchil2347.t1|Name=Gchil2347.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=689bp MAAAVTSAPILPAGYKRSKECGNLVSVVPFRPFSELAEQLLADKPMEAPL DNGRVSLIVERPDINMRCLVEKTRLTVERGMLNSGWIEREDMGKTDQICI MSEAAIRVITNGENRLEWAAAGDNLFFDMDLGKDNLDTGDRVQVGEQVVL EVTSKPHRGCSKFAERYGKDALKVRYSRLVALNDTSLHMALDTLSISRSV ASLPPRKRPTKSPDVFSPFNYPPPSSTIEIEQPSLFLTPLSKEVVTALFN AARSEHSSLPPRAKHKLLRRENGAINQAAPEAPKIDPLSAPPRKLLARRV SHPLLKSYGSNTTSTSTFRTARSRLGLKRRPSELSSSLRDLAHQLQSVDN LRAKRSRLLGGQEKPQDIPDVPGAEPRFVELVTQEMLEKSPNVQWDDIAG LDFAKTCVKEAVIWPMQRPDIFVGLRGPPKGLLLFGPPGTGKTMIGKAIA SQSKAKFFNISASSLMSKWIGDAEKTVRALFLTARAMQPSVVFVDEIDSI LTSRNENEHESSRRLKTEFLVQMDGAGTSREDRVLVVGATNRPQELDEAA RRRLVKRLYIPLPDMSARKSLVRRLLEKQQGNDVREDEIEQVAKITDGYS GSDLYALCAEASLGPVRELGDKIGSVEASSVRAIRISDFEYASRVVRASV GKHELSGYVNWNKTYGSFSAGENGKNGPGMESVNDMYI* back to topspliced messenger RNA >Gchil2347.t1 ID=Gchil2347.t1|Name=Gchil2347.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2067bp|location=Sequence derived from alignment at tig00004400_pilon:82509..85352- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCAGCAGCAGTCACAAGTGCTCCCATTCTTCCTGCAGGATACAAACG CAGCAAAGAGTGTGGGAACCTGGTATCGGTCGTACCTTTCAGGCCGTTCT CAGAACTGGCGGAGCAACTGTTGGCAGACAAGCCCATGGAAGCGCCGCTT GACAACGGAAGAGTATCACTTATAGTGGAACGGCCCGATATAAATATGCG TTGCTTGGTGGAGAAAACTAGGTTAACAGTTGAGCGGGGAATGTTAAATT CTGGATGGATTGAGCGGGAAGACATGGGCAAAACTGATCAAATATGCATA ATGTCCGAAGCAGCCATTCGAGTGATCACAAACGGTGAAAATAGGCTCGA GTGGGCTGCTGCGGGGGACAATTTGTTCTTTGATATGGATCTTGGAAAGG ATAACCTTGACACAGGTGATCGAGTGCAGGTTGGTGAACAGGTTGTACTG GAGGTCACATCGAAGCCACACAGAGGTTGCAGTAAATTTGCTGAACGGTA TGGAAAAGATGCATTGAAGGTTCGATATTCACGTCTCGTCGCACTCAACG ATACTTCCCTTCACATGGCTTTAGACACATTGTCCATTTCTCGCTCCGTT GCATCTCTTCCACCTCGAAAACGACCCACAAAATCCCCAGATGTTTTCTC ACCATTCAACTATCCGCCCCCATCGTCCACCATTGAAATTGAGCAGCCGT CACTGTTTCTCACCCCGCTCTCAAAGGAGGTTGTAACAGCCCTTTTCAAC GCCGCGCGTTCCGAACATTCCTCACTGCCTCCACGCGCCAAACACAAGCT ACTGCGCCGAGAAAACGGTGCTATCAACCAAGCAGCTCCCGAAGCACCCA AGATCGATCCACTCTCGGCCCCCCCGCGCAAACTTTTAGCCCGAAGGGTT TCTCACCCCTTACTCAAGTCTTATGGCTCCAATACTACCTCCACTTCTAC CTTCCGCACCGCAAGGTCCAGGTTGGGCTTGAAGAGAAGACCATCTGAGC TTTCTTCAAGTCTCAGAGATCTCGCCCACCAGTTGCAAAGCGTCGACAAT CTCCGCGCGAAGCGCTCCCGACTGCTGGGAGGCCAGGAAAAACCCCAGGA CATTCCTGACGTCCCAGGCGCTGAACCTCGCTTTGTCGAGCTGGTGACAC AGGAGATGCTCGAGAAAAGCCCAAACGTCCAATGGGATGACATTGCAGGT TTGGACTTTGCCAAAACATGCGTCAAGGAAGCTGTCATATGGCCAATGCA AAGACCAGATATTTTTGTCGGACTGAGAGGTCCGCCAAAGGGGTTGCTAT TGTTCGGACCCCCGGGTACTGGAAAAACCATGATTGGGAAAGCGATTGCT TCTCAGTCGAAAGCCAAGTTCTTTAACATTAGTGCATCTTCTCTGATGTC CAAGTGGATAGGTGACGCTGAAAAGACCGTCAGGGCCCTGTTTTTGACCG CAAGAGCAATGCAACCCAGCGTGGTGTTCGTGGATGAGATTGACAGCATA CTCACCTCCAGAAATGAAAATGAACATGAGTCTTCCAGAAGGTTGAAAAC CGAATTCCTCGTCCAAATGGATGGCGCAGGTACTAGCAGAGAAGACCGCG TTTTGGTTGTTGGTGCTACGAATCGTCCGCAAGAACTGGACGAAGCCGCC AGAAGAAGACTTGTGAAACGATTGTACATCCCACTACCCGATATGTCAGC ACGAAAGAGTTTGGTGCGACGTTTGCTCGAAAAGCAGCAGGGAAATGATG TGAGGGAGGATGAAATAGAGCAAGTAGCGAAGATAACTGATGGATACTCT GGAAGCGATTTGTATGCTTTGTGCGCGGAAGCCTCGTTGGGGCCTGTGCG GGAACTGGGTGATAAGATCGGCAGCGTTGAAGCTTCTAGCGTAAGGGCCA TTCGAATATCGGACTTTGAGTACGCTTCACGAGTCGTGAGAGCTAGCGTA GGAAAGCATGAACTCTCTGGTTATGTGAATTGGAACAAGACGTATGGATC TTTCTCAGCTGGTGAAAATGGTAAAAACGGTCCCGGAATGGAATCAGTGA ATGACATGTACATTTGA back to topprotein sequence of Gchil2347.t1 >Gchil2347.t1 ID=Gchil2347.t1|Name=Gchil2347.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=689bp
MAAAVTSAPILPAGYKRSKECGNLVSVVPFRPFSELAEQLLADKPMEAPL DNGRVSLIVERPDINMRCLVEKTRLTVERGMLNSGWIEREDMGKTDQICI MSEAAIRVITNGENRLEWAAAGDNLFFDMDLGKDNLDTGDRVQVGEQVVL EVTSKPHRGCSKFAERYGKDALKVRYSRLVALNDTSLHMALDTLSISRSV ASLPPRKRPTKSPDVFSPFNYPPPSSTIEIEQPSLFLTPLSKEVVTALFN AARSEHSSLPPRAKHKLLRRENGAINQAAPEAPKIDPLSAPPRKLLARRV SHPLLKSYGSNTTSTSTFRTARSRLGLKRRPSELSSSLRDLAHQLQSVDN LRAKRSRLLGGQEKPQDIPDVPGAEPRFVELVTQEMLEKSPNVQWDDIAG LDFAKTCVKEAVIWPMQRPDIFVGLRGPPKGLLLFGPPGTGKTMIGKAIA SQSKAKFFNISASSLMSKWIGDAEKTVRALFLTARAMQPSVVFVDEIDSI LTSRNENEHESSRRLKTEFLVQMDGAGTSREDRVLVVGATNRPQELDEAA RRRLVKRLYIPLPDMSARKSLVRRLLEKQQGNDVREDEIEQVAKITDGYS GSDLYALCAEASLGPVRELGDKIGSVEASSVRAIRISDFEYASRVVRASV GKHELSGYVNWNKTYGSFSAGENGKNGPGMESVNDMYI* back to topmRNA from alignment at tig00004400_pilon:82509..85352- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil2347.t1 ID=Gchil2347.t1|Name=Gchil2347.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2844bp|location=Sequence derived from alignment at tig00004400_pilon:82509..85352- (Gracilaria chilensis NLEC103_M9 male) ATGGCAGCAGCAGTCACAAGTGCTCCCATTCTTCCTGCAGGATACAAACG
CAGCAAAGAGTGTGGGAACCTGGTATCGGTCGTACCTTTCAGGCCGTTCT
CAGAACTGGCGGAGCAACTGTTGGCAGACAAGCCCATGGAAGCGCCGCTT
GACAACGGAAGAGTATCACTTATAGTGGAACGGCCCGATATAAATATGCG
TTGCTTGGTGGAGAAAACTAGGTTAACAGTTGAGCGGGGAATGTTAAATT
CTGGATGGATTGAGCGGGAAGACATGGGCAAAACTGATCAAATATGCATA
ATGTCCGAAGCAGCCATTCGAGTGATCACAAACGGTGAAAATAGGCTCGA
GTGGGCTGCTGCGGGGGACAATTTGTTCTTTGATATGGATCTTGGAAAGG
ATAACCTTGACACAGGTGATCGAGTGCAGGTTGGTGAACAGGTTGTACTG
GAGGTCACATCGAAGCCACACAGAGGTTGCAGTAAATTTGCTGAACGGTA
TGGAAAAGATGCATTGAAGGTTGTGAGTATGCCTTTGGGTAGACAGCGAA
GGTTGCGTGGTATATATTTTTCGGTCGTGAGGGGGGGAGAAGTAAAGGTC
GGCGATATTGTGAAGAAGATTGCAAAAGAAGACGAGACTTGAAAGATAAA
GGTGATAACAAAGCAAACGTGAGCAGCAAAAGCTTATAAACGTAGAGCTG
GTGCTGTTGGTACGTTCGACCAAGCCGTTCCCCCGCGGTGGATGCGTCGA
AAGCATGAGTATGTCGCCGTAACAAATGGGCACAGCAAGAAGCAATCGCA
GCCGCAAGCACTCGGCGTTCAAATCGGAGCAAGAGAAGCGCCAAGCGTCT
TCCACGCGGAGTCGAAATGCGAGCAAACGTTTCTCCGGGCCACGTCGCAC
CGCCGCCATGGCCATGAAACCACAGCGGCGGAGGCGTTCACCACTGTACT
CGAACCGAAAAGCCATGCATGCGCGAAAACAGCGTTTGCAAAGGCCAGCA
CAGCCGCTCTCAAAATACCAAATCACCGTGCCACAGCACCCACCCGCGTA
CACCGCCTCACTGCGGCCGCCTGCCCTTTGCCTGCTGCCCTTCGCCTGCC
CTCGCCTATCATCCATCTCCGCCCACCCCACCGCCCACCCTCCCCCCCCT
TCCCCCAAACCCCAGTCCCCCAAAACCGCCTCCAACCTCCTCCCACCGTA
CCCTCCCAACCTCCTCCGCACCTGTCTCCTCCTCGCCTCTATCCCTTCTC
GCCCACGCGTTCTACCCACCCATCCTCCGCCCTGGACATGCAAAACCAGC
GATATTCACGTCTCGTCGCACTCAACGATACTTCCCTTCACATGGCTTTA
GACACATTGTCCATTTCTCGCTCCGTTGCATCTCTTCCACCTCGAAAACG
ACCCACAAAATCCCCAGATGTTTTCTCACCATTCAACTATCCGCCCCCAT
CGTCCACCATTGAAATTGAGCAGCCGTCACTGTTTCTCACCCCGCTCTCA
AAGGAGGTTGTAACAGCCCTTTTCAACGCCGCGCGTTCCGAACATTCCTC
ACTGCCTCCACGCGCCAAACACAAGCTACTGCGCCGAGAAAACGGTGCTA
TCAACCAAGCAGCTCCCGAAGCACCCAAGATCGATCCACTCTCGGCCCCC
CCGCGCAAACTTTTAGCCCGAAGGGTTTCTCACCCCTTACTCAAGTCTTA
TGGCTCCAATACTACCTCCACTTCTACCTTCCGCACCGCAAGGTCCAGGT
TGGGCTTGAAGAGAAGACCATCTGAGCTTTCTTCAAGTCTCAGAGATCTC
GCCCACCAGTTGCAAAGCGTCGACAATCTCCGCGCGAAGCGCTCCCGACT
GCTGGGAGGCCAGGAAAAACCCCAGGACATTCCTGACGTCCCAGGCGCTG
AACCTCGCTTTGTCGAGCTGGTGACACAGGAGATGCTCGAGAAAAGCCCA
AACGTCCAATGGGATGACATTGCAGGTTTGGACTTTGCCAAAACATGCGT
CAAGGAAGCTGTCATATGGCCAATGCAAAGACCAGATATTTTTGTCGGAC
TGAGAGGTCCGCCAAAGGGGTTGCTATTGTTCGGACCCCCGGGTACTGGA
AAAACCATGATTGGGAAAGCGATTGCTTCTCAGTCGAAAGCCAAGTTCTT
TAACATTAGTGCATCTTCTCTGATGTCCAAGTGGATAGGTGACGCTGAAA
AGACCGTCAGGGCCCTGTTTTTGACCGCAAGAGCAATGCAACCCAGCGTG
GTGTTCGTGGATGAGATTGACAGCATACTCACCTCCAGAAATGAAAATGA
ACATGAGTCTTCCAGAAGGTTGAAAACCGAATTCCTCGTCCAAATGGATG
GCGCAGGTACTAGCAGAGAAGACCGCGTTTTGGTTGTTGGTGCTACGAAT
CGTCCGCAAGAACTGGACGAAGCCGCCAGAAGAAGACTTGTGAAACGATT
GTACATCCCACTACCCGATATGTCAGCACGAAAGAGTTTGGTGCGACGTT
TGCTCGAAAAGCAGCAGGGAAATGATGTGAGGGAGGATGAAATAGAGCAA
GTAGCGAAGATAACTGATGGATACTCTGGAAGCGATTTGTATGCTTTGTG
CGCGGAAGCCTCGTTGGGGCCTGTGCGGGAACTGGGTGATAAGATCGGCA
GCGTTGAAGCTTCTAGCGTAAGGGCCATTCGAATATCGGACTTTGAGTAC
GCTTCACGAGTCGTGAGAGCTAGCGTAGGAAAGCATGAACTCTCTGGTTA
TGTGAATTGGAACAAGACGTATGGATCTTTCTCAGCTGGTGAAAATGGTA
AAAACGGTCCCGGAATGGAATCAGTGAATGACATGTACATTTGA back to topCoding sequence (CDS) from alignment at tig00004400_pilon:82509..85352- >Gchil2347.t1 ID=Gchil2347.t1|Name=Gchil2347.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2067bp|location=Sequence derived from alignment at tig00004400_pilon:82509..85352- (Gracilaria chilensis NLEC103_M9 male) ATGGCAGCAGCAGTCACAAGTGCTCCCATTCTTCCTGCAGGATACAAACG CAGCAAAGAGTGTGGGAACCTGGTATCGGTCGTACCTTTCAGGCCGTTCT CAGAACTGGCGGAGCAACTGTTGGCAGACAAGCCCATGGAAGCGCCGCTT GACAACGGAAGAGTATCACTTATAGTGGAACGGCCCGATATAAATATGCG TTGCTTGGTGGAGAAAACTAGGTTAACAGTTGAGCGGGGAATGTTAAATT CTGGATGGATTGAGCGGGAAGACATGGGCAAAACTGATCAAATATGCATA ATGTCCGAAGCAGCCATTCGAGTGATCACAAACGGTGAAAATAGGCTCGA GTGGGCTGCTGCGGGGGACAATTTGTTCTTTGATATGGATCTTGGAAAGG ATAACCTTGACACAGGTGATCGAGTGCAGGTTGGTGAACAGGTTGTACTG GAGGTCACATCGAAGCCACACAGAGGTTGCAGTAAATTTGCTGAACGGTA TGGAAAAGATGCATTGAAGGTTCGATATTCACGTCTCGTCGCACTCAACG ATACTTCCCTTCACATGGCTTTAGACACATTGTCCATTTCTCGCTCCGTT GCATCTCTTCCACCTCGAAAACGACCCACAAAATCCCCAGATGTTTTCTC ACCATTCAACTATCCGCCCCCATCGTCCACCATTGAAATTGAGCAGCCGT CACTGTTTCTCACCCCGCTCTCAAAGGAGGTTGTAACAGCCCTTTTCAAC GCCGCGCGTTCCGAACATTCCTCACTGCCTCCACGCGCCAAACACAAGCT ACTGCGCCGAGAAAACGGTGCTATCAACCAAGCAGCTCCCGAAGCACCCA AGATCGATCCACTCTCGGCCCCCCCGCGCAAACTTTTAGCCCGAAGGGTT TCTCACCCCTTACTCAAGTCTTATGGCTCCAATACTACCTCCACTTCTAC CTTCCGCACCGCAAGGTCCAGGTTGGGCTTGAAGAGAAGACCATCTGAGC TTTCTTCAAGTCTCAGAGATCTCGCCCACCAGTTGCAAAGCGTCGACAAT CTCCGCGCGAAGCGCTCCCGACTGCTGGGAGGCCAGGAAAAACCCCAGGA CATTCCTGACGTCCCAGGCGCTGAACCTCGCTTTGTCGAGCTGGTGACAC AGGAGATGCTCGAGAAAAGCCCAAACGTCCAATGGGATGACATTGCAGGT TTGGACTTTGCCAAAACATGCGTCAAGGAAGCTGTCATATGGCCAATGCA AAGACCAGATATTTTTGTCGGACTGAGAGGTCCGCCAAAGGGGTTGCTAT TGTTCGGACCCCCGGGTACTGGAAAAACCATGATTGGGAAAGCGATTGCT TCTCAGTCGAAAGCCAAGTTCTTTAACATTAGTGCATCTTCTCTGATGTC CAAGTGGATAGGTGACGCTGAAAAGACCGTCAGGGCCCTGTTTTTGACCG CAAGAGCAATGCAACCCAGCGTGGTGTTCGTGGATGAGATTGACAGCATA CTCACCTCCAGAAATGAAAATGAACATGAGTCTTCCAGAAGGTTGAAAAC CGAATTCCTCGTCCAAATGGATGGCGCAGGTACTAGCAGAGAAGACCGCG TTTTGGTTGTTGGTGCTACGAATCGTCCGCAAGAACTGGACGAAGCCGCC AGAAGAAGACTTGTGAAACGATTGTACATCCCACTACCCGATATGTCAGC ACGAAAGAGTTTGGTGCGACGTTTGCTCGAAAAGCAGCAGGGAAATGATG TGAGGGAGGATGAAATAGAGCAAGTAGCGAAGATAACTGATGGATACTCT GGAAGCGATTTGTATGCTTTGTGCGCGGAAGCCTCGTTGGGGCCTGTGCG GGAACTGGGTGATAAGATCGGCAGCGTTGAAGCTTCTAGCGTAAGGGCCA TTCGAATATCGGACTTTGAGTACGCTTCACGAGTCGTGAGAGCTAGCGTA GGAAAGCATGAACTCTCTGGTTATGTGAATTGGAACAAGACGTATGGATC TTTCTCAGCTGGTGAAAATGGTAAAAACGGTCCCGGAATGGAATCAGTGA ATGACATGTACATTTGA back to top
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