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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 3055.EDO97013 |
| Max annot lvl | 3041|Chlorophyta |
| KEGG ko | ko:K15426 |
| Evalue | 2.8e-31 |
| EggNOG OGs | KOG0211@1|root,KOG0211@2759|Eukaryota,37M8M@33090|Viridiplantae,34J2Q@3041|Chlorophyta |
| Description | regulatory subunit |
| COG category | T |
| BRITE | ko00000,ko01009,ko03400 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil2241.t1 ID=Gchil2241.t1|Name=Gchil2241.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=859bp MAAEAATPDAPQASQSASEPSSSPPSANGTTPSATPTNPTARTPQTHAYS TIQPPNGINADPEAAALHSSDSQVDDQDSKAYDPDTSGVEFVVLNDEVLT SVANATLVLLDGSDLERLAVMFQFPQFLEHCPDDTLQIMVPEICRDAVRW KDEVQMAAAEALYFVVNMHVPETVAKRIVVAALRIIQMSESGDVFDAWGE ILSMMLPQVKREDVKSLVVPATVDRASSPTVESRRLAARIIGSLNDALTP NELEEQFLGQAMRLCDDQDPSVRAMIAQSLASVGAKLPLRISERQLWPKL DSLMTDDNARVRAAAMRAVARSAEAHKAECLNSLSFKNMLLPTFLRECAT ASTVASSDLRNVDDDTYLMLEIFSEVYGYLLCAVHPLFANEETWNTALNS LRRMVTCNGPTVRHWCAFNVPAVAVVCGSKRPEKIRGVVHALSADTDVET RATLAAGIHETARVLGKGELREEILNAISNLMTDQNPQVRMNSLSHFAEL LILLSTGPEEGQSESPNEKNSPAKELSPVFRSLETMSHDSWRTQELLARQ IDQCANRIPQDMLCEHVAPLLFQMARESTYLVRRASISALVSVVRYIPDV RRRDHILKHFRSEWARGKVYWTRLAYIDGSTAALKLLSHRLFTHLFASEL LSLSRDSVANVRLRLTRLMPEIATACGSKTAFKNAMESLLNDPDDEIRRE AELVQEKIRNAVPPTPEMEADNAAKEAAERKFFIQRQKRKNNNSNKDGAS DGGRNPDFKGPMRRNASFTNNTDGASGAKQTVVTHSVLGAPGYPSTDNLS PGHLAAGPGRQANGRKENEAGDGKPNGRTGQRPRPNGKAADRAQSGRRKG SVFRRCFA* back to topspliced messenger RNA >Gchil2241.t1 ID=Gchil2241.t1|Name=Gchil2241.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2577bp|location=Sequence derived from alignment at tig00000228_pilon:472892..475591+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCTGCCGAAGCAGCTACCCCGGACGCGCCGCAAGCATCTCAATCTGC ATCTGAGCCGTCGTCTTCTCCGCCAAGTGCAAACGGCACAACACCTTCTG CAACCCCAACCAACCCTACTGCCCGAACACCCCAAACCCATGCCTATTCC ACAATCCAGCCTCCAAACGGAATCAATGCTGATCCAGAGGCCGCGGCGCT GCACTCCTCGGATTCGCAAGTCGACGACCAGGATTCAAAAGCGTATGATC CCGATACCTCCGGTGTTGAATTTGTTGTTCTCAACGACGAAGTTCTTACC AGCGTCGCTAATGCCACCTTAGTTCTTCTTGATGGCTCTGACCTTGAGAG GTTGGCTGTTATGTTCCAGTTTCCCCAGTTTCTGGAGCACTGTCCGGATG ACACGCTCCAGATTATGGTTCCGGAAATATGTCGCGATGCAGTGCGATGG AAAGACGAAGTTCAAATGGCTGCCGCAGAAGCGTTGTACTTTGTGGTTAA CATGCATGTTCCCGAAACTGTTGCAAAGCGCATTGTTGTGGCTGCGTTGC GAATTATTCAAATGAGTGAGAGTGGCGATGTGTTTGATGCGTGGGGCGAG ATTCTTTCAATGATGCTTCCCCAGGTCAAGCGTGAGGATGTCAAGTCACT TGTAGTACCTGCTACCGTAGACCGCGCATCAAGTCCAACAGTTGAATCTC GACGTCTGGCAGCTAGAATCATAGGTTCCCTGAATGACGCTTTGACACCA AACGAATTGGAGGAGCAGTTTTTGGGCCAAGCGATGCGTCTTTGTGATGA CCAAGATCCCTCAGTTCGCGCTATGATAGCACAGTCTCTTGCATCGGTCG GAGCCAAATTACCTTTGCGCATCTCGGAAAGACAACTATGGCCGAAATTG GATTCTCTTATGACGGACGACAATGCGCGTGTTCGTGCCGCCGCTATGCG GGCCGTCGCTCGATCTGCTGAAGCACACAAAGCGGAGTGCTTGAATTCTC TAAGCTTCAAGAATATGTTACTTCCCACATTTTTGCGAGAGTGTGCAACA GCCAGCACCGTCGCTTCTTCTGACCTCCGAAATGTTGATGACGACACTTA TCTCATGCTTGAGATATTTTCAGAGGTCTATGGGTATCTCTTGTGCGCTG TGCATCCATTATTTGCAAACGAGGAGACATGGAACACTGCTTTGAATTCA CTGCGACGGATGGTCACGTGCAATGGTCCTACTGTTCGACATTGGTGCGC TTTCAATGTACCCGCGGTCGCCGTGGTGTGTGGTTCCAAACGACCGGAAA AGATTCGTGGGGTGGTTCATGCACTGTCCGCGGATACAGATGTCGAAACA AGAGCCACCCTTGCCGCCGGTATTCACGAGACTGCCCGCGTGCTTGGGAA GGGCGAGCTAAGAGAGGAGATTCTAAATGCTATTTCTAATCTGATGACAG ACCAGAATCCACAAGTCCGAATGAACTCATTGTCCCACTTTGCAGAACTT CTCATCCTGCTTTCGACTGGACCCGAGGAAGGTCAATCTGAAAGTCCAAA TGAGAAGAACTCCCCTGCAAAGGAGCTATCTCCAGTGTTCCGGTCTCTTG AAACTATGTCACATGATTCATGGAGAACTCAGGAGCTGTTGGCGAGGCAG ATCGACCAATGCGCCAATCGTATTCCACAAGATATGCTCTGTGAGCATGT CGCCCCTTTGTTGTTCCAAATGGCAAGAGAGTCTACGTATTTGGTGCGTA GGGCTTCTATATCTGCTCTCGTGTCGGTTGTGAGGTACATTCCCGACGTG AGGCGAAGAGACCATATTCTCAAACATTTTCGCTCAGAATGGGCGAGAGG GAAGGTGTACTGGACACGATTAGCATATATAGATGGAAGCACAGCTGCAC TCAAGCTCCTTAGCCACCGGTTATTTACTCATTTATTTGCTTCTGAGTTG CTTTCTTTGTCCAGAGATTCTGTCGCAAATGTCAGACTTCGTCTGACGAG GCTCATGCCGGAAATTGCCACAGCGTGCGGGTCAAAAACGGCCTTCAAAA ATGCAATGGAATCTCTTCTGAATGATCCGGACGATGAGATTAGGAGAGAG GCGGAGCTGGTACAAGAGAAGATCAGGAATGCTGTGCCTCCCACCCCAGA AATGGAAGCAGATAATGCTGCAAAGGAAGCCGCAGAGCGCAAGTTCTTTA TACAAAGACAGAAAAGAAAGAATAACAATTCTAACAAAGACGGTGCCTCT GATGGAGGTAGAAATCCCGATTTCAAGGGTCCTATGCGTCGTAATGCATC ATTCACAAACAACACCGATGGTGCTTCCGGAGCGAAGCAAACAGTGGTCA CCCACAGTGTTCTTGGGGCACCGGGCTACCCGTCAACTGATAATCTCTCT CCAGGCCATCTGGCTGCAGGACCTGGTAGACAGGCTAATGGTCGAAAAGA AAATGAAGCTGGGGATGGAAAACCAAACGGCCGAACTGGTCAAAGACCTC GGCCAAACGGGAAGGCTGCAGACCGGGCGCAGAGTGGAAGAAGAAAAGGT TCTGTTTTCCGACGTTGCTTTGCATGA back to topprotein sequence of Gchil2241.t1 >Gchil2241.t1 ID=Gchil2241.t1|Name=Gchil2241.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=859bp
MAAEAATPDAPQASQSASEPSSSPPSANGTTPSATPTNPTARTPQTHAYS TIQPPNGINADPEAAALHSSDSQVDDQDSKAYDPDTSGVEFVVLNDEVLT SVANATLVLLDGSDLERLAVMFQFPQFLEHCPDDTLQIMVPEICRDAVRW KDEVQMAAAEALYFVVNMHVPETVAKRIVVAALRIIQMSESGDVFDAWGE ILSMMLPQVKREDVKSLVVPATVDRASSPTVESRRLAARIIGSLNDALTP NELEEQFLGQAMRLCDDQDPSVRAMIAQSLASVGAKLPLRISERQLWPKL DSLMTDDNARVRAAAMRAVARSAEAHKAECLNSLSFKNMLLPTFLRECAT ASTVASSDLRNVDDDTYLMLEIFSEVYGYLLCAVHPLFANEETWNTALNS LRRMVTCNGPTVRHWCAFNVPAVAVVCGSKRPEKIRGVVHALSADTDVET RATLAAGIHETARVLGKGELREEILNAISNLMTDQNPQVRMNSLSHFAEL LILLSTGPEEGQSESPNEKNSPAKELSPVFRSLETMSHDSWRTQELLARQ IDQCANRIPQDMLCEHVAPLLFQMARESTYLVRRASISALVSVVRYIPDV RRRDHILKHFRSEWARGKVYWTRLAYIDGSTAALKLLSHRLFTHLFASEL LSLSRDSVANVRLRLTRLMPEIATACGSKTAFKNAMESLLNDPDDEIRRE AELVQEKIRNAVPPTPEMEADNAAKEAAERKFFIQRQKRKNNNSNKDGAS DGGRNPDFKGPMRRNASFTNNTDGASGAKQTVVTHSVLGAPGYPSTDNLS PGHLAAGPGRQANGRKENEAGDGKPNGRTGQRPRPNGKAADRAQSGRRKG SVFRRCFA* back to topmRNA from alignment at tig00000228_pilon:472892..475591+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil2241.t1 ID=Gchil2241.t1|Name=Gchil2241.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2700bp|location=Sequence derived from alignment at tig00000228_pilon:472892..475591+ (Gracilaria chilensis NLEC103_M9 male) ATGGCTGCCGAAGCAGCTACCCCGGACGCGCCGCAAGCATCTCAATCTGC
ATCTGAGCCGTCGTCTTCTCCGCCAAGTGCAAACGGCACAACACCTTCTG
CAACCCCAACCAACCCTACTGCCCGAACACCCCAAACCCATGCCTATTCC
ACAATCCAGCCTCCAAACGGAATCAATGCTGATCCAGAGGCCGCGGCGCT
GCACTCCTCGGATTCGCAAGTCGACGACCAGGATTCAAAAGCGTATGATC
CCGATACCTCCGGTGTTGAATTTGTTGTTCTCAACGACGAAGTTCTTACC
AGCGTCGCTAATGCCACCTTAGTTCTTCTTGATGGCTCTGACCTTGAGAG
GTTGGCTGTTATGTTCCAGTTTCCCCAGTTTCTGGAGCACTGTCCGGATG
ACACGCTCCAGATTATGGTTCCGGAAATATGTCGCGATGCAGTGCGATGG
AAAGACGAAGTTCAAATGGCTGCCGCAGAAGCGTTGTACTTTGTGGTTAA
CATGCATGTTCCCGAAACTGTTGCAAAGCGCATTGTTGTGGCTGCGTTGC
GAATTATTCAAATGAGTGAGAGTGGCGATGTGTTTGATGCGTGGGGCGAG
ATTCTTTCAATGATGCTTCCCCAGGTCAAGCGTGAGGATGTCAAGTCACT
TGTAGTACCTGCTACCGTAGACCGCGCATCAAGTCCAACAGTTGAATCTC
GACGTCTGGCAGCTAGAATCATAGGTTCCCTGAATGACGCTTTGACACCA
AACGAATTGGAGGAGCAGTTTTTGGGCCAAGCGATGCGTCTTTGTGATGA
CCAAGATCCCTCAGTTCGCGCTATGATAGCACAGTCTCTTGCATCGGTCG
GAGCCAAATTACCTTTGCGCATCTCGGAAAGACAACTATGGCCGAAATTG
GATTCTCTTATGACGGACGACAATGCGCGTGTTCGTGCCGCCGCTATGCG
GGCCGTCGCTCGATCTGCTGAAGCACACAAAGCGGAGTGCTTGAATTCTC
TAAGCTTCAAGAATATGTTACTTCCCACATTTTTGCGAGAGTGTGCAACA
GCCAGCACCGTCGCTTCTTCTGACCTCCGAAATGTTGATGACGACACTTA
TCTCATGCTTGAGATATTTTCAGAGGTCTATGGGTATCTCTTGTGCGCTG
TGCATCCATTATTTGCAAACGAGGAGACATGGAACACTGCTTTGAATTCA
CTGCGACGGATGGTCACGTGCAATGGTCCTACTGTTCGACATTGGTGCGC
TTTCAATGTACCCGCGGTCGCCGTGGTGTGTGGTTCCAAACGACCGGAAA
AGATTCGTGGGGTGGTTCATGCACTGTCCGCGGATACAGATGTCGAAACA
AGAGCCACCCTTGCCGCCGGTATTCACGAGACTGCCCGCGTGCTTGGGAA
GGGCGAGCTAAGAGAGGAGATTCTAAATGCTATTTCTAATCTGATGACAG
ACCAGAATCCACAAGTCCGAATGAACTCATTGTCCCACTTTGCAGAACTT
CTCATCCTGCTTTCGACTGGACCCGAGGAAGGTCAATCTGAAAGTCCAAA
TGAGAAGAACTCCCCTGCAAAGGAGCTATCTCCAGTGTTCCGGTCTCTTG
AAACTATGTCACATGATTCATGGAGAACTCAGGAGCTGTTGGCGAGGCAG
ATCGACCAATGCGCCAATCGTATTCCACAAGATATGCTCTGTGAGCATGT
CGCCCCTTTGTTGTTCCAAATGGCAAGAGAGTCTACGTATTTGGTGCGTA
GGGCTTCTATATCTGCTCTCGTGTCGGTTGTGAGGTACATTCCCGACGTG
AGGCGAAGAGACCATATTCTCAAACATTTTCGCTCAGAATGGGCGAGAGG
GAAGGTGTACTGGACACGATTAGCATATATAGATGGAAGCACAGCTGCAC
TCAAGCTCCTTAGCCACCGGTTATTTACTCATTTATTTGCTTCTGAGTTG
CTTTCTTTGTCCAGAGATTCTGTCGCAAATGTCAGACTTCGTCTGACGAG
GCTCATGCCGGAAATTGCCACAGCGTGCGGGTCAAAAACGGCCTTCAAAA
ATGCAATGGAATCTCTTCTGAATGATCCGGACGATGAGATTAGGAGAGAG
GCGGAGCTGGTACAAGAGAAGATCAGGAATGCTGTGCCTCCCACCCCAGA
AATGGAAGCAGATAATGCTGCAAAGGAAGCCGCAGAGCGCAAGTTCTTTA
TACAAAGACAGAAAAGAAAGAATAACAATTCTAACAAAGACGGTGCCTCT
GATGGAGGTAGAAATCCCGATTTCAAGGGTCCTATGCGTCGTAATGCATC
ATTCACAAACAACACCGATGGTGCTTCCGGAGCGAAGCAAACAGTGGTCA
CCCACAGTGTTCTTGGGGCACCGGGCTACCCGTCAACTGATAATCTCTCT
CCAGGCCATCTGGCTGCAGGACCTGGTAGACAGGCTAATGGTCGAAAAGA
AAATGAAGCTGGGGATGGAAAACCAAACGGCCGAACTGGTCAAAGACCTC
GGCCAAACGGGAAGGCTGCAGACCGGGCGCAGAGTGGAAGAAGAAAAGGT
AAGTTTTGTATTTCATTGCGCATGACATCTATTATTGTTTCCTTTTCCTG
GAGTTGAATCCCCCGCTTCTGACCGACGTTTTTCTCAATGTGTTAATTGA
TGATCCTCATCCATTTTATAGGTTCTGTTTTCCGACGTTGCTTTGCATGA
back to topCoding sequence (CDS) from alignment at tig00000228_pilon:472892..475591+ >Gchil2241.t1 ID=Gchil2241.t1|Name=Gchil2241.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2577bp|location=Sequence derived from alignment at tig00000228_pilon:472892..475591+ (Gracilaria chilensis NLEC103_M9 male) ATGGCTGCCGAAGCAGCTACCCCGGACGCGCCGCAAGCATCTCAATCTGC ATCTGAGCCGTCGTCTTCTCCGCCAAGTGCAAACGGCACAACACCTTCTG CAACCCCAACCAACCCTACTGCCCGAACACCCCAAACCCATGCCTATTCC ACAATCCAGCCTCCAAACGGAATCAATGCTGATCCAGAGGCCGCGGCGCT GCACTCCTCGGATTCGCAAGTCGACGACCAGGATTCAAAAGCGTATGATC CCGATACCTCCGGTGTTGAATTTGTTGTTCTCAACGACGAAGTTCTTACC AGCGTCGCTAATGCCACCTTAGTTCTTCTTGATGGCTCTGACCTTGAGAG GTTGGCTGTTATGTTCCAGTTTCCCCAGTTTCTGGAGCACTGTCCGGATG ACACGCTCCAGATTATGGTTCCGGAAATATGTCGCGATGCAGTGCGATGG AAAGACGAAGTTCAAATGGCTGCCGCAGAAGCGTTGTACTTTGTGGTTAA CATGCATGTTCCCGAAACTGTTGCAAAGCGCATTGTTGTGGCTGCGTTGC GAATTATTCAAATGAGTGAGAGTGGCGATGTGTTTGATGCGTGGGGCGAG ATTCTTTCAATGATGCTTCCCCAGGTCAAGCGTGAGGATGTCAAGTCACT TGTAGTACCTGCTACCGTAGACCGCGCATCAAGTCCAACAGTTGAATCTC GACGTCTGGCAGCTAGAATCATAGGTTCCCTGAATGACGCTTTGACACCA AACGAATTGGAGGAGCAGTTTTTGGGCCAAGCGATGCGTCTTTGTGATGA CCAAGATCCCTCAGTTCGCGCTATGATAGCACAGTCTCTTGCATCGGTCG GAGCCAAATTACCTTTGCGCATCTCGGAAAGACAACTATGGCCGAAATTG GATTCTCTTATGACGGACGACAATGCGCGTGTTCGTGCCGCCGCTATGCG GGCCGTCGCTCGATCTGCTGAAGCACACAAAGCGGAGTGCTTGAATTCTC TAAGCTTCAAGAATATGTTACTTCCCACATTTTTGCGAGAGTGTGCAACA GCCAGCACCGTCGCTTCTTCTGACCTCCGAAATGTTGATGACGACACTTA TCTCATGCTTGAGATATTTTCAGAGGTCTATGGGTATCTCTTGTGCGCTG TGCATCCATTATTTGCAAACGAGGAGACATGGAACACTGCTTTGAATTCA CTGCGACGGATGGTCACGTGCAATGGTCCTACTGTTCGACATTGGTGCGC TTTCAATGTACCCGCGGTCGCCGTGGTGTGTGGTTCCAAACGACCGGAAA AGATTCGTGGGGTGGTTCATGCACTGTCCGCGGATACAGATGTCGAAACA AGAGCCACCCTTGCCGCCGGTATTCACGAGACTGCCCGCGTGCTTGGGAA GGGCGAGCTAAGAGAGGAGATTCTAAATGCTATTTCTAATCTGATGACAG ACCAGAATCCACAAGTCCGAATGAACTCATTGTCCCACTTTGCAGAACTT CTCATCCTGCTTTCGACTGGACCCGAGGAAGGTCAATCTGAAAGTCCAAA TGAGAAGAACTCCCCTGCAAAGGAGCTATCTCCAGTGTTCCGGTCTCTTG AAACTATGTCACATGATTCATGGAGAACTCAGGAGCTGTTGGCGAGGCAG ATCGACCAATGCGCCAATCGTATTCCACAAGATATGCTCTGTGAGCATGT CGCCCCTTTGTTGTTCCAAATGGCAAGAGAGTCTACGTATTTGGTGCGTA GGGCTTCTATATCTGCTCTCGTGTCGGTTGTGAGGTACATTCCCGACGTG AGGCGAAGAGACCATATTCTCAAACATTTTCGCTCAGAATGGGCGAGAGG GAAGGTGTACTGGACACGATTAGCATATATAGATGGAAGCACAGCTGCAC TCAAGCTCCTTAGCCACCGGTTATTTACTCATTTATTTGCTTCTGAGTTG CTTTCTTTGTCCAGAGATTCTGTCGCAAATGTCAGACTTCGTCTGACGAG GCTCATGCCGGAAATTGCCACAGCGTGCGGGTCAAAAACGGCCTTCAAAA ATGCAATGGAATCTCTTCTGAATGATCCGGACGATGAGATTAGGAGAGAG GCGGAGCTGGTACAAGAGAAGATCAGGAATGCTGTGCCTCCCACCCCAGA AATGGAAGCAGATAATGCTGCAAAGGAAGCCGCAGAGCGCAAGTTCTTTA TACAAAGACAGAAAAGAAAGAATAACAATTCTAACAAAGACGGTGCCTCT GATGGAGGTAGAAATCCCGATTTCAAGGGTCCTATGCGTCGTAATGCATC ATTCACAAACAACACCGATGGTGCTTCCGGAGCGAAGCAAACAGTGGTCA CCCACAGTGTTCTTGGGGCACCGGGCTACCCGTCAACTGATAATCTCTCT CCAGGCCATCTGGCTGCAGGACCTGGTAGACAGGCTAATGGTCGAAAAGA AAATGAAGCTGGGGATGGAAAACCAAACGGCCGAACTGGTCAAAGACCTC GGCCAAACGGGAAGGCTGCAGACCGGGCGCAGAGTGGAAGAAGAAAAGGT TCTGTTTTCCGACGTTGCTTTGCATGA back to top
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