Gchil2237.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil2237.t1
Unique NameGchil2237.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length137
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000228_piloncontigtig00000228_pilon:440664..441074 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2237Gchil2237Gracilaria chilensis NLEC103_M9 malegenetig00000228_pilon 440664..441074 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2237.t1.stop1Gchil2237.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000228_pilon 440664..440666 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2237.t1.CDS1Gchil2237.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000228_pilon 440664..441074 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2237.t1.exon1Gchil2237.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000228_pilon 440664..441074 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2237.t1.start1Gchil2237.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000228_pilon 441072..441074 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2237.t1Gchil2237.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000228_pilon 440664..441074 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil2237.t1 ID=Gchil2237.t1|Name=Gchil2237.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=137bp
MEEIDTLGSGSVESRAVHSNSPESSDSVEDIHGVDMVRGTSSARGADATA
MIVTGSVKEVGGEQSIRQVVEYAQTMLPVTAYDVSVSTLRLFRTMKLSFG
DVLLKLESHTELMIWERQGIYRAKAVMLGSRSFRQR*
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spliced messenger RNA

>Gchil2237.t1 ID=Gchil2237.t1|Name=Gchil2237.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=411bp|location=Sequence derived from alignment at tig00000228_pilon:440664..441074- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAAGAAATTGATACTCTTGGCAGTGGCTCCGTGGAATCAAGAGCAGT
GCATTCAAATTCTCCAGAATCCTCCGATTCAGTTGAAGACATTCACGGAG
TGGATATGGTGAGAGGCACAAGTAGCGCTAGGGGTGCCGATGCAACGGCC
ATGATAGTCACTGGCTCAGTTAAGGAAGTGGGTGGTGAACAAAGCATTCG
ACAAGTTGTGGAATATGCGCAAACTATGCTTCCGGTAACGGCGTATGATG
TCAGTGTTTCAACCCTACGACTATTCCGTACAATGAAGTTGTCCTTCGGG
GATGTTTTGCTTAAGCTAGAGAGCCACACAGAGCTCATGATATGGGAAAG
ACAGGGGATTTATCGTGCAAAGGCAGTGATGCTGGGTAGCCGCTCATTTC
GACAGAGGTGA
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protein sequence of Gchil2237.t1

>Gchil2237.t1 ID=Gchil2237.t1|Name=Gchil2237.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=137bp
MEEIDTLGSGSVESRAVHSNSPESSDSVEDIHGVDMVRGTSSARGADATA
MIVTGSVKEVGGEQSIRQVVEYAQTMLPVTAYDVSVSTLRLFRTMKLSFG
DVLLKLESHTELMIWERQGIYRAKAVMLGSRSFRQR*
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mRNA from alignment at tig00000228_pilon:440664..441074-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil2237.t1 ID=Gchil2237.t1|Name=Gchil2237.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=411bp|location=Sequence derived from alignment at tig00000228_pilon:440664..441074- (Gracilaria chilensis NLEC103_M9 male)
ATGGAAGAAATTGATACTCTTGGCAGTGGCTCCGTGGAATCAAGAGCAGT
GCATTCAAATTCTCCAGAATCCTCCGATTCAGTTGAAGACATTCACGGAG
TGGATATGGTGAGAGGCACAAGTAGCGCTAGGGGTGCCGATGCAACGGCC
ATGATAGTCACTGGCTCAGTTAAGGAAGTGGGTGGTGAACAAAGCATTCG
ACAAGTTGTGGAATATGCGCAAACTATGCTTCCGGTAACGGCGTATGATG
TCAGTGTTTCAACCCTACGACTATTCCGTACAATGAAGTTGTCCTTCGGG
GATGTTTTGCTTAAGCTAGAGAGCCACACAGAGCTCATGATATGGGAAAG
ACAGGGGATTTATCGTGCAAAGGCAGTGATGCTGGGTAGCCGCTCATTTC
GACAGAGGTGA
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Coding sequence (CDS) from alignment at tig00000228_pilon:440664..441074-

>Gchil2237.t1 ID=Gchil2237.t1|Name=Gchil2237.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=411bp|location=Sequence derived from alignment at tig00000228_pilon:440664..441074- (Gracilaria chilensis NLEC103_M9 male)
ATGGAAGAAATTGATACTCTTGGCAGTGGCTCCGTGGAATCAAGAGCAGT
GCATTCAAATTCTCCAGAATCCTCCGATTCAGTTGAAGACATTCACGGAG
TGGATATGGTGAGAGGCACAAGTAGCGCTAGGGGTGCCGATGCAACGGCC
ATGATAGTCACTGGCTCAGTTAAGGAAGTGGGTGGTGAACAAAGCATTCG
ACAAGTTGTGGAATATGCGCAAACTATGCTTCCGGTAACGGCGTATGATG
TCAGTGTTTCAACCCTACGACTATTCCGTACAATGAAGTTGTCCTTCGGG
GATGTTTTGCTTAAGCTAGAGAGCCACACAGAGCTCATGATATGGGAAAG
ACAGGGGATTTATCGTGCAAAGGCAGTGATGCTGGGTAGCCGCTCATTTC
GACAGAGGTGA
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