Gchil2151.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil2151.t1
Unique NameGchil2151.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length506
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000228_piloncontigtig00000228_pilon:56719..58236 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2151Gchil2151Gracilaria chilensis NLEC103_M9 malegenetig00000228_pilon 56719..58236 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2151.t1.start1Gchil2151.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000228_pilon 56719..56721 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2151.t1.CDS1Gchil2151.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000228_pilon 56719..58236 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2151.t1.exon1Gchil2151.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000228_pilon 56719..58236 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2151.t1.stop1Gchil2151.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000228_pilon 58234..58236 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2151.t1Gchil2151.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000228_pilon 56719..58236 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil2151.t1 ID=Gchil2151.t1|Name=Gchil2151.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=506bp
MRALSKLLFLQAFVAVLSLAQARNGFFSAMCIIFQERCPIGMQNESEGCK
PVPMVQQARQCLEAACTYCGSLANQFPCLRTEIRQVCDGSQVRSTLVLSA
PATIPAEPVTSAPTPMPMQVVATPTPMTMEPMVVTPTPMAMEPAVVTPTP
MAMENVVNTPSPMAMEPMMAMATPTPMTPGVAPSPPVSPMGDLDTIIGGG
ESPVTDVDPFNSEQPAEPSPEMTTEDSMLPDAMSTSDPIATPMYTPKPGE
ISMMDDEATMPSMMNETAMPPTTMPDTTSTTTESSTTTTPPTTMPPATEP
PTTEPPTTMAPMSDSDPSGCTYTGTDRVTISLGSVTPADGWVRKNRDGMS
GLVFRPDKNHGILKPGLEGVMCFAVRLEIPGDYHLTAVSAAPDRTENNDM
WIKSSKPLTLIRNGVVQNGNTDWYKGYQNDGGNKIADHLKTVDNRGHDFV
VTNVRANENFNICISGRSYRYEVFKIILNQCGSARCLSGSSPRGSLLDST
PSLCS*
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spliced messenger RNA

>Gchil2151.t1 ID=Gchil2151.t1|Name=Gchil2151.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1518bp|location=Sequence derived from alignment at tig00000228_pilon:56719..58236+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGTGCTCTTTCGAAGCTCTTGTTTCTACAAGCTTTTGTTGCTGTGCT
CTCCCTCGCCCAAGCTCGTAATGGCTTCTTTTCGGCCATGTGTATAATCT
TTCAGGAGAGATGCCCTATTGGAATGCAAAACGAATCAGAAGGATGCAAG
CCCGTCCCCATGGTCCAACAAGCTCGCCAATGTCTTGAAGCGGCTTGCAC
ATACTGCGGAAGCCTTGCCAACCAGTTCCCTTGCCTCAGGACTGAAATCC
GACAAGTATGCGATGGAAGTCAAGTCCGTAGTACTCTCGTCCTTTCCGCA
CCCGCTACGATTCCCGCGGAACCCGTCACGAGCGCCCCGACGCCCATGCC
CATGCAAGTTGTGGCTACCCCTACCCCGATGACCATGGAACCCATGGTGG
TCACCCCGACCCCGATGGCCATGGAACCTGCAGTAGTTACCCCGACCCCG
ATGGCCATGGAAAATGTAGTTAATACCCCGAGCCCAATGGCTATGGAACC
CATGATGGCGATGGCTACTCCGACCCCGATGACGCCAGGCGTCGCTCCTT
CCCCGCCCGTGTCTCCCATGGGCGACCTTGATACAATTATTGGTGGTGGT
GAATCACCTGTCACGGATGTGGATCCGTTCAACAGCGAGCAACCTGCCGA
GCCATCCCCGGAAATGACCACGGAAGATTCGATGTTGCCAGATGCAATGT
CGACCTCCGACCCAATTGCCACTCCGATGTACACGCCAAAACCCGGCGAA
ATCTCCATGATGGATGATGAGGCCACTATGCCATCCATGATGAATGAAAC
TGCCATGCCTCCCACCACCATGCCAGACACAACATCGACAACAACCGAGT
CATCAACCACTACTACGCCGCCTACCACGATGCCTCCTGCGACAGAGCCA
CCGACCACGGAACCCCCAACAACCATGGCGCCAATGAGTGACTCCGATCC
CTCAGGGTGCACTTACACAGGTACTGACAGAGTTACCATCTCTCTTGGCT
CTGTTACACCAGCAGACGGATGGGTCCGCAAGAACAGGGATGGAATGAGC
GGTTTGGTGTTCCGTCCTGATAAGAATCATGGCATTCTAAAGCCAGGCCT
TGAAGGAGTGATGTGTTTCGCCGTTCGGCTAGAAATACCTGGGGATTATC
ATCTTACAGCGGTATCAGCAGCTCCCGACAGAACTGAGAACAACGACATG
TGGATAAAGTCGTCCAAGCCACTGACTCTCATTCGAAATGGAGTCGTGCA
GAACGGAAACACCGACTGGTACAAGGGTTATCAGAACGACGGAGGTAATA
AAATAGCAGACCATCTAAAAACTGTCGATAACAGGGGCCATGACTTTGTC
GTGACCAACGTGCGTGCAAACGAGAACTTCAACATTTGCATATCGGGAAG
AAGTTACAGGTACGAGGTATTCAAAATTATTCTTAATCAGTGTGGCAGTG
CGCGATGTCTGTCTGGTTCCTCGCCACGGGGGTCTCTGTTAGACTCGACC
CCTTCTCTCTGCTCGTAG
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protein sequence of Gchil2151.t1

>Gchil2151.t1 ID=Gchil2151.t1|Name=Gchil2151.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=506bp
MRALSKLLFLQAFVAVLSLAQARNGFFSAMCIIFQERCPIGMQNESEGCK
PVPMVQQARQCLEAACTYCGSLANQFPCLRTEIRQVCDGSQVRSTLVLSA
PATIPAEPVTSAPTPMPMQVVATPTPMTMEPMVVTPTPMAMEPAVVTPTP
MAMENVVNTPSPMAMEPMMAMATPTPMTPGVAPSPPVSPMGDLDTIIGGG
ESPVTDVDPFNSEQPAEPSPEMTTEDSMLPDAMSTSDPIATPMYTPKPGE
ISMMDDEATMPSMMNETAMPPTTMPDTTSTTTESSTTTTPPTTMPPATEP
PTTEPPTTMAPMSDSDPSGCTYTGTDRVTISLGSVTPADGWVRKNRDGMS
GLVFRPDKNHGILKPGLEGVMCFAVRLEIPGDYHLTAVSAAPDRTENNDM
WIKSSKPLTLIRNGVVQNGNTDWYKGYQNDGGNKIADHLKTVDNRGHDFV
VTNVRANENFNICISGRSYRYEVFKIILNQCGSARCLSGSSPRGSLLDST
PSLCS*
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mRNA from alignment at tig00000228_pilon:56719..58236+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil2151.t1 ID=Gchil2151.t1|Name=Gchil2151.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1518bp|location=Sequence derived from alignment at tig00000228_pilon:56719..58236+ (Gracilaria chilensis NLEC103_M9 male)
ATGCGTGCTCTTTCGAAGCTCTTGTTTCTACAAGCTTTTGTTGCTGTGCT
CTCCCTCGCCCAAGCTCGTAATGGCTTCTTTTCGGCCATGTGTATAATCT
TTCAGGAGAGATGCCCTATTGGAATGCAAAACGAATCAGAAGGATGCAAG
CCCGTCCCCATGGTCCAACAAGCTCGCCAATGTCTTGAAGCGGCTTGCAC
ATACTGCGGAAGCCTTGCCAACCAGTTCCCTTGCCTCAGGACTGAAATCC
GACAAGTATGCGATGGAAGTCAAGTCCGTAGTACTCTCGTCCTTTCCGCA
CCCGCTACGATTCCCGCGGAACCCGTCACGAGCGCCCCGACGCCCATGCC
CATGCAAGTTGTGGCTACCCCTACCCCGATGACCATGGAACCCATGGTGG
TCACCCCGACCCCGATGGCCATGGAACCTGCAGTAGTTACCCCGACCCCG
ATGGCCATGGAAAATGTAGTTAATACCCCGAGCCCAATGGCTATGGAACC
CATGATGGCGATGGCTACTCCGACCCCGATGACGCCAGGCGTCGCTCCTT
CCCCGCCCGTGTCTCCCATGGGCGACCTTGATACAATTATTGGTGGTGGT
GAATCACCTGTCACGGATGTGGATCCGTTCAACAGCGAGCAACCTGCCGA
GCCATCCCCGGAAATGACCACGGAAGATTCGATGTTGCCAGATGCAATGT
CGACCTCCGACCCAATTGCCACTCCGATGTACACGCCAAAACCCGGCGAA
ATCTCCATGATGGATGATGAGGCCACTATGCCATCCATGATGAATGAAAC
TGCCATGCCTCCCACCACCATGCCAGACACAACATCGACAACAACCGAGT
CATCAACCACTACTACGCCGCCTACCACGATGCCTCCTGCGACAGAGCCA
CCGACCACGGAACCCCCAACAACCATGGCGCCAATGAGTGACTCCGATCC
CTCAGGGTGCACTTACACAGGTACTGACAGAGTTACCATCTCTCTTGGCT
CTGTTACACCAGCAGACGGATGGGTCCGCAAGAACAGGGATGGAATGAGC
GGTTTGGTGTTCCGTCCTGATAAGAATCATGGCATTCTAAAGCCAGGCCT
TGAAGGAGTGATGTGTTTCGCCGTTCGGCTAGAAATACCTGGGGATTATC
ATCTTACAGCGGTATCAGCAGCTCCCGACAGAACTGAGAACAACGACATG
TGGATAAAGTCGTCCAAGCCACTGACTCTCATTCGAAATGGAGTCGTGCA
GAACGGAAACACCGACTGGTACAAGGGTTATCAGAACGACGGAGGTAATA
AAATAGCAGACCATCTAAAAACTGTCGATAACAGGGGCCATGACTTTGTC
GTGACCAACGTGCGTGCAAACGAGAACTTCAACATTTGCATATCGGGAAG
AAGTTACAGGTACGAGGTATTCAAAATTATTCTTAATCAGTGTGGCAGTG
CGCGATGTCTGTCTGGTTCCTCGCCACGGGGGTCTCTGTTAGACTCGACC
CCTTCTCTCTGCTCGTAG
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Coding sequence (CDS) from alignment at tig00000228_pilon:56719..58236+

>Gchil2151.t1 ID=Gchil2151.t1|Name=Gchil2151.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1518bp|location=Sequence derived from alignment at tig00000228_pilon:56719..58236+ (Gracilaria chilensis NLEC103_M9 male)
ATGCGTGCTCTTTCGAAGCTCTTGTTTCTACAAGCTTTTGTTGCTGTGCT
CTCCCTCGCCCAAGCTCGTAATGGCTTCTTTTCGGCCATGTGTATAATCT
TTCAGGAGAGATGCCCTATTGGAATGCAAAACGAATCAGAAGGATGCAAG
CCCGTCCCCATGGTCCAACAAGCTCGCCAATGTCTTGAAGCGGCTTGCAC
ATACTGCGGAAGCCTTGCCAACCAGTTCCCTTGCCTCAGGACTGAAATCC
GACAAGTATGCGATGGAAGTCAAGTCCGTAGTACTCTCGTCCTTTCCGCA
CCCGCTACGATTCCCGCGGAACCCGTCACGAGCGCCCCGACGCCCATGCC
CATGCAAGTTGTGGCTACCCCTACCCCGATGACCATGGAACCCATGGTGG
TCACCCCGACCCCGATGGCCATGGAACCTGCAGTAGTTACCCCGACCCCG
ATGGCCATGGAAAATGTAGTTAATACCCCGAGCCCAATGGCTATGGAACC
CATGATGGCGATGGCTACTCCGACCCCGATGACGCCAGGCGTCGCTCCTT
CCCCGCCCGTGTCTCCCATGGGCGACCTTGATACAATTATTGGTGGTGGT
GAATCACCTGTCACGGATGTGGATCCGTTCAACAGCGAGCAACCTGCCGA
GCCATCCCCGGAAATGACCACGGAAGATTCGATGTTGCCAGATGCAATGT
CGACCTCCGACCCAATTGCCACTCCGATGTACACGCCAAAACCCGGCGAA
ATCTCCATGATGGATGATGAGGCCACTATGCCATCCATGATGAATGAAAC
TGCCATGCCTCCCACCACCATGCCAGACACAACATCGACAACAACCGAGT
CATCAACCACTACTACGCCGCCTACCACGATGCCTCCTGCGACAGAGCCA
CCGACCACGGAACCCCCAACAACCATGGCGCCAATGAGTGACTCCGATCC
CTCAGGGTGCACTTACACAGGTACTGACAGAGTTACCATCTCTCTTGGCT
CTGTTACACCAGCAGACGGATGGGTCCGCAAGAACAGGGATGGAATGAGC
GGTTTGGTGTTCCGTCCTGATAAGAATCATGGCATTCTAAAGCCAGGCCT
TGAAGGAGTGATGTGTTTCGCCGTTCGGCTAGAAATACCTGGGGATTATC
ATCTTACAGCGGTATCAGCAGCTCCCGACAGAACTGAGAACAACGACATG
TGGATAAAGTCGTCCAAGCCACTGACTCTCATTCGAAATGGAGTCGTGCA
GAACGGAAACACCGACTGGTACAAGGGTTATCAGAACGACGGAGGTAATA
AAATAGCAGACCATCTAAAAACTGTCGATAACAGGGGCCATGACTTTGTC
GTGACCAACGTGCGTGCAAACGAGAACTTCAACATTTGCATATCGGGAAG
AAGTTACAGGTACGAGGTATTCAAAATTATTCTTAATCAGTGTGGCAGTG
CGCGATGTCTGTCTGGTTCCTCGCCACGGGGGTCTCTGTTAGACTCGACC
CCTTCTCTCTGCTCGTAG
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