Gchil2069.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil2069.t1
Unique NameGchil2069.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length792
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000019_piloncontigtig00000019_pilon:386561..388936 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005706728.1
PFAMsPkinase
Max annot lvl2759|Eukaryota
KEGG koko:K08794,ko:K17530
KEGG Pathwayko04921,ko04925,map04921,map04925
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018107,GO:0018193,GO:0018209,GO:0018210,GO:0019538,GO:0023052,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0140096,GO:1901564
Evalue2.81e-78
EggNOG OGsKOG0032@1|root,KOG0032@2759|Eukaryota
EC2.7.11.1,2.7.11.17
Descriptionprotein serine/threonine kinase activity
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2069Gchil2069Gracilaria chilensis NLEC103_M9 malegenetig00000019_pilon 386561..388936 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2069.t1.stop1Gchil2069.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000019_pilon 386561..386563 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2069.t1.CDS1Gchil2069.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000019_pilon 386561..388936 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2069.t1.exon1Gchil2069.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000019_pilon 386561..388936 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2069.t1.start1Gchil2069.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000019_pilon 388934..388936 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2069.t1Gchil2069.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000019_pilon 386561..388936 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil2069.t1 ID=Gchil2069.t1|Name=Gchil2069.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=792bp
MQSELSLSPVARTPPPAPPPTPNAVSIPTSPQPDLALLDALVSATQRVYY
SAGILQPPRPVSSHSTLPWLLERLQHLNDYLTRRSRNVLSEQASSEFLDG
LGDRKVYSDEEPDHIFEEVPRSRSRTISATSRPRLSAYKNPLLPELEIGD
DAHLPSTASSGLDPRRDARPPSTLLDFAANSFFNKMSSWKSLGYSEATKL
HRDYSKIFCSEEQPKLENGESSIQVAGGDLYNKQPLAQRWELAQKIGEGG
YAVVRLSRRKDPLPGQPPPENRLAAIKIISKRNADMYNEKMVSREVFSFR
LLELAGGHANIVELYEVCEDDENVYLVMELLQGGELFVRIAERGQYTERD
AANLVVSMLASLAFCHRHNLTHRDVKPENFVFTEPNGDDADVKLTDFGIA
YYSEDPTALCKTLCGTPLYVAPEVLLRQPYGAEADLWSLGVIVYIMLVGY
PPFDDNDIVQLVKKIKFRPVKFDGPEWKLISSQAKEFLANLLDKDASNRM
TAQQALEHDWLRNNCEAATMNVLDVAQSNIKSFVNRKRWRQAIQGVKAMN
RLHRMIELSREPHIADELDDISAEKVEVVAVQRPSDEGDGYRPSYYPSPF
LSRGISSSSSEQESVETKLTPLTNLMTSASSMPPTSVSYSDQGTSRTNNA
VSHLSHRLLLPTVPEVDNGTSMVLPSIETLYGSNEDVSRFSNERPRPQRQ
RGPLVTQEFASGLVRTETTPMPARGYNSHSGRLGRSLTRGDGGVVRKMSN
HARKLISRGKWGRASSSSDSRTPVMIGMGEHRRNKIFPWFK*
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spliced messenger RNA

>Gchil2069.t1 ID=Gchil2069.t1|Name=Gchil2069.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2376bp|location=Sequence derived from alignment at tig00000019_pilon:386561..388936- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGTCTGAGCTATCGCTCTCACCGGTGGCGCGCACACCCCCGCCCGC
CCCCCCCCCTACCCCCAACGCTGTTAGCATTCCCACTTCCCCACAACCCG
ACCTCGCCCTCCTAGATGCCCTAGTCTCCGCCACGCAGCGCGTTTACTAT
TCCGCCGGAATACTCCAACCCCCTCGACCCGTCTCCTCACATAGCACTCT
ACCGTGGCTGCTGGAGCGCCTGCAACATCTCAATGACTATCTCACGCGCA
GGTCGAGAAACGTTCTATCCGAACAAGCCAGCTCCGAATTTCTCGACGGC
TTGGGTGACAGGAAGGTATACTCCGATGAGGAGCCTGATCACATTTTCGA
AGAAGTTCCACGCTCAAGGTCCAGAACCATTAGTGCTACAAGTAGGCCTC
GCCTTTCCGCCTACAAGAACCCCTTGCTGCCTGAACTCGAAATTGGAGAC
GACGCCCATTTGCCTTCAACTGCCAGCTCGGGCCTTGACCCGCGTAGAGA
TGCGCGTCCACCCTCCACACTACTAGACTTTGCAGCCAATTCATTTTTCA
ACAAGATGAGCTCGTGGAAGAGCCTGGGTTATTCCGAAGCCACTAAATTG
CATCGCGACTACTCCAAGATTTTCTGCAGTGAGGAGCAGCCAAAGCTGGA
AAACGGCGAAAGTTCAATTCAAGTTGCCGGTGGGGACCTGTACAACAAGC
AACCCCTTGCGCAGCGCTGGGAACTCGCTCAAAAGATTGGAGAAGGCGGC
TATGCCGTTGTCCGACTTTCAAGAAGGAAGGATCCACTGCCGGGCCAACC
ACCGCCGGAGAATCGCTTAGCAGCCATCAAGATTATCTCCAAGCGAAACG
CAGACATGTACAACGAGAAAATGGTCAGTCGTGAGGTATTCAGTTTTCGA
CTCCTCGAACTCGCGGGCGGACACGCCAACATAGTGGAGTTGTACGAGGT
CTGTGAGGACGACGAGAACGTTTATTTGGTCATGGAACTTCTTCAAGGCG
GAGAACTATTTGTAAGAATAGCAGAGAGGGGTCAATATACTGAGCGCGAC
GCTGCAAATTTGGTCGTATCCATGTTGGCCAGTCTTGCGTTTTGCCACCG
GCATAATCTCACTCACCGTGATGTCAAACCCGAAAACTTCGTGTTTACCG
AACCAAACGGCGACGATGCAGATGTGAAGCTCACTGATTTTGGAATTGCC
TACTACTCTGAGGATCCAACTGCGCTGTGCAAGACTTTGTGCGGCACGCC
GTTGTATGTTGCCCCCGAGGTTCTTCTCCGACAGCCGTATGGAGCAGAAG
CAGACCTCTGGTCGCTTGGCGTCATCGTGTACATCATGTTAGTCGGGTAC
CCTCCATTTGACGATAATGATATCGTGCAACTGGTCAAGAAGATCAAATT
TCGTCCGGTCAAGTTTGATGGTCCAGAGTGGAAGCTTATTTCATCACAAG
CCAAGGAATTTCTCGCCAACCTCCTCGACAAAGATGCATCGAATCGGATG
ACAGCACAACAGGCCTTGGAACACGATTGGCTTCGAAACAATTGCGAGGC
GGCAACTATGAACGTGCTAGATGTGGCTCAATCCAACATCAAGTCATTTG
TAAATCGTAAGAGATGGCGCCAGGCAATACAGGGTGTCAAGGCGATGAAC
CGTCTCCATCGTATGATCGAATTAAGTCGCGAGCCCCATATCGCAGACGA
ATTGGATGATATTTCGGCTGAAAAGGTCGAAGTCGTTGCGGTACAGCGAC
CTAGTGACGAAGGTGATGGATACCGTCCGAGCTACTATCCAAGTCCGTTT
CTATCTCGCGGAATTTCGAGTTCAAGCAGCGAACAAGAATCAGTGGAAAC
GAAGCTTACCCCTCTCACAAATTTAATGACTTCTGCTTCTTCTATGCCAC
CCACCTCAGTATCATACTCTGATCAAGGGACGAGCCGAACTAACAACGCA
GTGTCCCATTTGTCGCACCGTCTCCTGCTACCGACCGTCCCAGAAGTTGA
CAATGGTACTTCAATGGTTTTGCCCTCTATTGAAACACTGTACGGAAGCA
ATGAAGACGTTAGTCGATTTTCGAATGAGCGGCCGAGACCTCAACGGCAG
AGAGGTCCATTGGTTACTCAAGAATTTGCTTCAGGTCTTGTAAGAACCGA
AACCACTCCCATGCCCGCCCGAGGCTACAACAGCCACAGCGGCAGGCTAG
GTCGCTCACTAACCCGCGGAGACGGCGGAGTTGTGCGAAAGATGTCTAAT
CATGCCCGCAAACTGATATCCAGGGGAAAGTGGGGAAGGGCTAGCAGTAG
TAGCGACAGTCGAACCCCAGTCATGATCGGCATGGGAGAACATAGGCGCA
ACAAAATATTTCCGTGGTTCAAGTAG
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protein sequence of Gchil2069.t1

>Gchil2069.t1 ID=Gchil2069.t1|Name=Gchil2069.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=792bp
MQSELSLSPVARTPPPAPPPTPNAVSIPTSPQPDLALLDALVSATQRVYY
SAGILQPPRPVSSHSTLPWLLERLQHLNDYLTRRSRNVLSEQASSEFLDG
LGDRKVYSDEEPDHIFEEVPRSRSRTISATSRPRLSAYKNPLLPELEIGD
DAHLPSTASSGLDPRRDARPPSTLLDFAANSFFNKMSSWKSLGYSEATKL
HRDYSKIFCSEEQPKLENGESSIQVAGGDLYNKQPLAQRWELAQKIGEGG
YAVVRLSRRKDPLPGQPPPENRLAAIKIISKRNADMYNEKMVSREVFSFR
LLELAGGHANIVELYEVCEDDENVYLVMELLQGGELFVRIAERGQYTERD
AANLVVSMLASLAFCHRHNLTHRDVKPENFVFTEPNGDDADVKLTDFGIA
YYSEDPTALCKTLCGTPLYVAPEVLLRQPYGAEADLWSLGVIVYIMLVGY
PPFDDNDIVQLVKKIKFRPVKFDGPEWKLISSQAKEFLANLLDKDASNRM
TAQQALEHDWLRNNCEAATMNVLDVAQSNIKSFVNRKRWRQAIQGVKAMN
RLHRMIELSREPHIADELDDISAEKVEVVAVQRPSDEGDGYRPSYYPSPF
LSRGISSSSSEQESVETKLTPLTNLMTSASSMPPTSVSYSDQGTSRTNNA
VSHLSHRLLLPTVPEVDNGTSMVLPSIETLYGSNEDVSRFSNERPRPQRQ
RGPLVTQEFASGLVRTETTPMPARGYNSHSGRLGRSLTRGDGGVVRKMSN
HARKLISRGKWGRASSSSDSRTPVMIGMGEHRRNKIFPWFK*
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mRNA from alignment at tig00000019_pilon:386561..388936-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil2069.t1 ID=Gchil2069.t1|Name=Gchil2069.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2376bp|location=Sequence derived from alignment at tig00000019_pilon:386561..388936- (Gracilaria chilensis NLEC103_M9 male)
ATGCAGTCTGAGCTATCGCTCTCACCGGTGGCGCGCACACCCCCGCCCGC CCCCCCCCCTACCCCCAACGCTGTTAGCATTCCCACTTCCCCACAACCCG ACCTCGCCCTCCTAGATGCCCTAGTCTCCGCCACGCAGCGCGTTTACTAT TCCGCCGGAATACTCCAACCCCCTCGACCCGTCTCCTCACATAGCACTCT ACCGTGGCTGCTGGAGCGCCTGCAACATCTCAATGACTATCTCACGCGCA GGTCGAGAAACGTTCTATCCGAACAAGCCAGCTCCGAATTTCTCGACGGC TTGGGTGACAGGAAGGTATACTCCGATGAGGAGCCTGATCACATTTTCGA AGAAGTTCCACGCTCAAGGTCCAGAACCATTAGTGCTACAAGTAGGCCTC GCCTTTCCGCCTACAAGAACCCCTTGCTGCCTGAACTCGAAATTGGAGAC GACGCCCATTTGCCTTCAACTGCCAGCTCGGGCCTTGACCCGCGTAGAGA TGCGCGTCCACCCTCCACACTACTAGACTTTGCAGCCAATTCATTTTTCA ACAAGATGAGCTCGTGGAAGAGCCTGGGTTATTCCGAAGCCACTAAATTG CATCGCGACTACTCCAAGATTTTCTGCAGTGAGGAGCAGCCAAAGCTGGA AAACGGCGAAAGTTCAATTCAAGTTGCCGGTGGGGACCTGTACAACAAGC AACCCCTTGCGCAGCGCTGGGAACTCGCTCAAAAGATTGGAGAAGGCGGC TATGCCGTTGTCCGACTTTCAAGAAGGAAGGATCCACTGCCGGGCCAACC ACCGCCGGAGAATCGCTTAGCAGCCATCAAGATTATCTCCAAGCGAAACG CAGACATGTACAACGAGAAAATGGTCAGTCGTGAGGTATTCAGTTTTCGA CTCCTCGAACTCGCGGGCGGACACGCCAACATAGTGGAGTTGTACGAGGT CTGTGAGGACGACGAGAACGTTTATTTGGTCATGGAACTTCTTCAAGGCG GAGAACTATTTGTAAGAATAGCAGAGAGGGGTCAATATACTGAGCGCGAC GCTGCAAATTTGGTCGTATCCATGTTGGCCAGTCTTGCGTTTTGCCACCG GCATAATCTCACTCACCGTGATGTCAAACCCGAAAACTTCGTGTTTACCG AACCAAACGGCGACGATGCAGATGTGAAGCTCACTGATTTTGGAATTGCC TACTACTCTGAGGATCCAACTGCGCTGTGCAAGACTTTGTGCGGCACGCC GTTGTATGTTGCCCCCGAGGTTCTTCTCCGACAGCCGTATGGAGCAGAAG CAGACCTCTGGTCGCTTGGCGTCATCGTGTACATCATGTTAGTCGGGTAC CCTCCATTTGACGATAATGATATCGTGCAACTGGTCAAGAAGATCAAATT TCGTCCGGTCAAGTTTGATGGTCCAGAGTGGAAGCTTATTTCATCACAAG CCAAGGAATTTCTCGCCAACCTCCTCGACAAAGATGCATCGAATCGGATG ACAGCACAACAGGCCTTGGAACACGATTGGCTTCGAAACAATTGCGAGGC GGCAACTATGAACGTGCTAGATGTGGCTCAATCCAACATCAAGTCATTTG TAAATCGTAAGAGATGGCGCCAGGCAATACAGGGTGTCAAGGCGATGAAC CGTCTCCATCGTATGATCGAATTAAGTCGCGAGCCCCATATCGCAGACGA ATTGGATGATATTTCGGCTGAAAAGGTCGAAGTCGTTGCGGTACAGCGAC CTAGTGACGAAGGTGATGGATACCGTCCGAGCTACTATCCAAGTCCGTTT CTATCTCGCGGAATTTCGAGTTCAAGCAGCGAACAAGAATCAGTGGAAAC GAAGCTTACCCCTCTCACAAATTTAATGACTTCTGCTTCTTCTATGCCAC CCACCTCAGTATCATACTCTGATCAAGGGACGAGCCGAACTAACAACGCA GTGTCCCATTTGTCGCACCGTCTCCTGCTACCGACCGTCCCAGAAGTTGA CAATGGTACTTCAATGGTTTTGCCCTCTATTGAAACACTGTACGGAAGCA ATGAAGACGTTAGTCGATTTTCGAATGAGCGGCCGAGACCTCAACGGCAG AGAGGTCCATTGGTTACTCAAGAATTTGCTTCAGGTCTTGTAAGAACCGA AACCACTCCCATGCCCGCCCGAGGCTACAACAGCCACAGCGGCAGGCTAG GTCGCTCACTAACCCGCGGAGACGGCGGAGTTGTGCGAAAGATGTCTAAT CATGCCCGCAAACTGATATCCAGGGGAAAGTGGGGAAGGGCTAGCAGTAG TAGCGACAGTCGAACCCCAGTCATGATCGGCATGGGAGAACATAGGCGCA ACAAAATATTTCCGTGGTTCAAGTAG
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Coding sequence (CDS) from alignment at tig00000019_pilon:386561..388936-

>Gchil2069.t1 ID=Gchil2069.t1|Name=Gchil2069.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2376bp|location=Sequence derived from alignment at tig00000019_pilon:386561..388936- (Gracilaria chilensis NLEC103_M9 male)
ATGCAGTCTGAGCTATCGCTCTCACCGGTGGCGCGCACACCCCCGCCCGC
CCCCCCCCCTACCCCCAACGCTGTTAGCATTCCCACTTCCCCACAACCCG
ACCTCGCCCTCCTAGATGCCCTAGTCTCCGCCACGCAGCGCGTTTACTAT
TCCGCCGGAATACTCCAACCCCCTCGACCCGTCTCCTCACATAGCACTCT
ACCGTGGCTGCTGGAGCGCCTGCAACATCTCAATGACTATCTCACGCGCA
GGTCGAGAAACGTTCTATCCGAACAAGCCAGCTCCGAATTTCTCGACGGC
TTGGGTGACAGGAAGGTATACTCCGATGAGGAGCCTGATCACATTTTCGA
AGAAGTTCCACGCTCAAGGTCCAGAACCATTAGTGCTACAAGTAGGCCTC
GCCTTTCCGCCTACAAGAACCCCTTGCTGCCTGAACTCGAAATTGGAGAC
GACGCCCATTTGCCTTCAACTGCCAGCTCGGGCCTTGACCCGCGTAGAGA
TGCGCGTCCACCCTCCACACTACTAGACTTTGCAGCCAATTCATTTTTCA
ACAAGATGAGCTCGTGGAAGAGCCTGGGTTATTCCGAAGCCACTAAATTG
CATCGCGACTACTCCAAGATTTTCTGCAGTGAGGAGCAGCCAAAGCTGGA
AAACGGCGAAAGTTCAATTCAAGTTGCCGGTGGGGACCTGTACAACAAGC
AACCCCTTGCGCAGCGCTGGGAACTCGCTCAAAAGATTGGAGAAGGCGGC
TATGCCGTTGTCCGACTTTCAAGAAGGAAGGATCCACTGCCGGGCCAACC
ACCGCCGGAGAATCGCTTAGCAGCCATCAAGATTATCTCCAAGCGAAACG
CAGACATGTACAACGAGAAAATGGTCAGTCGTGAGGTATTCAGTTTTCGA
CTCCTCGAACTCGCGGGCGGACACGCCAACATAGTGGAGTTGTACGAGGT
CTGTGAGGACGACGAGAACGTTTATTTGGTCATGGAACTTCTTCAAGGCG
GAGAACTATTTGTAAGAATAGCAGAGAGGGGTCAATATACTGAGCGCGAC
GCTGCAAATTTGGTCGTATCCATGTTGGCCAGTCTTGCGTTTTGCCACCG
GCATAATCTCACTCACCGTGATGTCAAACCCGAAAACTTCGTGTTTACCG
AACCAAACGGCGACGATGCAGATGTGAAGCTCACTGATTTTGGAATTGCC
TACTACTCTGAGGATCCAACTGCGCTGTGCAAGACTTTGTGCGGCACGCC
GTTGTATGTTGCCCCCGAGGTTCTTCTCCGACAGCCGTATGGAGCAGAAG
CAGACCTCTGGTCGCTTGGCGTCATCGTGTACATCATGTTAGTCGGGTAC
CCTCCATTTGACGATAATGATATCGTGCAACTGGTCAAGAAGATCAAATT
TCGTCCGGTCAAGTTTGATGGTCCAGAGTGGAAGCTTATTTCATCACAAG
CCAAGGAATTTCTCGCCAACCTCCTCGACAAAGATGCATCGAATCGGATG
ACAGCACAACAGGCCTTGGAACACGATTGGCTTCGAAACAATTGCGAGGC
GGCAACTATGAACGTGCTAGATGTGGCTCAATCCAACATCAAGTCATTTG
TAAATCGTAAGAGATGGCGCCAGGCAATACAGGGTGTCAAGGCGATGAAC
CGTCTCCATCGTATGATCGAATTAAGTCGCGAGCCCCATATCGCAGACGA
ATTGGATGATATTTCGGCTGAAAAGGTCGAAGTCGTTGCGGTACAGCGAC
CTAGTGACGAAGGTGATGGATACCGTCCGAGCTACTATCCAAGTCCGTTT
CTATCTCGCGGAATTTCGAGTTCAAGCAGCGAACAAGAATCAGTGGAAAC
GAAGCTTACCCCTCTCACAAATTTAATGACTTCTGCTTCTTCTATGCCAC
CCACCTCAGTATCATACTCTGATCAAGGGACGAGCCGAACTAACAACGCA
GTGTCCCATTTGTCGCACCGTCTCCTGCTACCGACCGTCCCAGAAGTTGA
CAATGGTACTTCAATGGTTTTGCCCTCTATTGAAACACTGTACGGAAGCA
ATGAAGACGTTAGTCGATTTTCGAATGAGCGGCCGAGACCTCAACGGCAG
AGAGGTCCATTGGTTACTCAAGAATTTGCTTCAGGTCTTGTAAGAACCGA
AACCACTCCCATGCCCGCCCGAGGCTACAACAGCCACAGCGGCAGGCTAG
GTCGCTCACTAACCCGCGGAGACGGCGGAGTTGTGCGAAAGATGTCTAAT
CATGCCCGCAAACTGATATCCAGGGGAAAGTGGGGAAGGGCTAGCAGTAG
TAGCGACAGTCGAACCCCAGTCATGATCGGCATGGGAGAACATAGGCGCA
ACAAAATATTTCCGTGGTTCAAGTAG
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