Gchil1959.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil1959.t1
Unique NameGchil1959.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length489
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004439_piloncontigtig00004439_pilon:1288431..1289897 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005706868.1
Preferred nameACY1
PFAMsM20_dimer,Peptidase_M20,Peptidase_M28
Max annot lvl2759|Eukaryota
KEGG rclassRC00064,RC00300
KEGG koko:K01436,ko:K14677
KEGG ReactionR00669,R10553
KEGG Pathwayko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00028
GOsGO:0003674,GO:0003824,GO:0004046,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006805,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009410,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019538,GO:0030163,GO:0031982,GO:0042221,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043230,GO:0044237,GO:0044238,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0070062,GO:0070887,GO:0071466,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1903561
Evalue2.92e-109
EggNOG OGsCOG0624@1|root,KOG2275@2759|Eukaryota
EC3.5.1.14
Descriptionaminoacylase activity
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko04147
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1959Gchil1959Gracilaria chilensis NLEC103_M9 malegenetig00004439_pilon 1288431..1289897 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1959.t1.stop1Gchil1959.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004439_pilon 1288431..1288433 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1959.t1.CDS1Gchil1959.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004439_pilon 1288431..1289897 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1959.t1.exon1Gchil1959.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004439_pilon 1288431..1289897 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1959.t1.start1Gchil1959.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004439_pilon 1289895..1289897 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1959.t1Gchil1959.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004439_pilon 1288431..1289897 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil1959.t1 ID=Gchil1959.t1|Name=Gchil1959.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=489bp
MLLSSRLIATFLVLLTAPILYVSRKKISVELSPSVTPVAPSIHRLQEYLR
IRTDHPNPSYLEAQYFLNRTVASLIPNASFSAHNFVQGKPVILIRIDGTN
PQLPSLLLNSHTDVVPSEDSEWEWPPYAARTVFKDGELRVYARGSQDMKS
VGMQYIEALAELLRTDWRPKRTIFISFVPDEEIGGRDGMGKLVDSVLFQR
MNVGVALDEGLPRYDGNFSCYYGERQTWWLAVNVSDRPGHGSNLPETTAA
STLNEIINKAMHFRKQQQRRLESGIDMGQIIGVNVAYLKSGHPDEHVSSG
FIMNLIPSVAAAGFDIRVPPTVDAKEVDEEIERWLACDDSKRCPGVTTEW
VIKVENSHVTSRDTEKNPYAAPFMSGLEKAGLGHRLNHGIFKAATDARYL
RMKGIPSFGFSPINKSPDLLHKHNEYLPVDTYLRGIRIYQNIIRDIADFN
SSSLEYDSSSTSSDTCKDSHDEQEAAEKRILNEEKEDL*
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spliced messenger RNA

>Gchil1959.t1 ID=Gchil1959.t1|Name=Gchil1959.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1467bp|location=Sequence derived from alignment at tig00004439_pilon:1288431..1289897- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGCTGTCATCCCGCCTTATCGCAACCTTTTTGGTCCTGCTAACAGC
TCCGATTCTCTATGTTAGTCGCAAAAAGATCTCTGTAGAACTTTCGCCCA
GCGTAACTCCCGTCGCCCCTTCAATACACCGTCTTCAGGAGTACCTTCGC
ATTCGAACCGATCATCCAAACCCATCTTATCTCGAGGCTCAGTACTTTCT
GAATCGAACAGTCGCTTCCTTAATACCGAATGCCTCGTTCTCAGCGCACA
ACTTTGTACAAGGAAAGCCGGTTATCCTAATAAGGATTGACGGAACCAAT
CCGCAACTACCTTCGCTTCTTCTCAATTCTCATACCGACGTTGTTCCTTC
AGAAGATTCCGAGTGGGAGTGGCCTCCATATGCTGCCCGTACTGTATTTA
AAGATGGTGAGCTTCGAGTTTATGCGCGCGGATCGCAGGATATGAAAAGC
GTTGGTATGCAATACATAGAAGCGCTTGCCGAACTTTTGCGCACTGATTG
GCGACCAAAGCGCACCATATTCATATCGTTCGTACCAGACGAAGAGATAG
GCGGCAGAGACGGCATGGGTAAACTGGTTGACAGTGTGCTGTTTCAACGC
ATGAATGTTGGCGTGGCCCTGGACGAGGGATTGCCAAGATATGATGGCAA
CTTTAGCTGCTATTACGGCGAGCGTCAAACTTGGTGGCTTGCTGTAAACG
TTAGTGATCGTCCAGGTCATGGGTCGAATCTGCCGGAAACCACAGCCGCC
TCAACGCTGAATGAAATCATTAACAAAGCAATGCATTTCAGAAAGCAGCA
GCAACGACGGTTGGAATCGGGAATTGATATGGGTCAAATCATTGGCGTAA
ATGTGGCGTACTTGAAGTCCGGACATCCTGACGAACATGTGTCCAGTGGA
TTTATCATGAACCTTATTCCGTCCGTCGCTGCTGCTGGATTTGATATTCG
CGTCCCGCCCACCGTTGATGCGAAAGAAGTAGACGAGGAGATTGAACGTT
GGCTAGCATGTGATGATTCGAAAAGATGTCCTGGCGTGACCACTGAATGG
GTCATCAAAGTCGAGAATTCTCATGTAACAAGTCGCGATACTGAGAAGAA
CCCGTACGCAGCTCCGTTTATGAGCGGTCTCGAAAAGGCGGGGCTTGGCC
ATCGTCTAAATCACGGCATCTTTAAAGCTGCTACAGACGCCCGATACTTG
AGGATGAAGGGTATTCCAAGTTTTGGCTTTTCTCCTATAAATAAGTCTCC
GGACTTATTGCATAAGCATAATGAATATCTTCCGGTCGATACTTACTTGC
GAGGCATTCGTATTTATCAGAACATAATTCGTGATATAGCAGACTTCAAC
TCGTCGTCATTGGAATACGACTCGTCTTCAACATCATCCGATACATGTAA
AGATTCTCATGATGAACAGGAAGCCGCTGAGAAGCGCATACTGAACGAGG
AGAAGGAGGATCTATGA
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protein sequence of Gchil1959.t1

>Gchil1959.t1 ID=Gchil1959.t1|Name=Gchil1959.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=489bp
MLLSSRLIATFLVLLTAPILYVSRKKISVELSPSVTPVAPSIHRLQEYLR
IRTDHPNPSYLEAQYFLNRTVASLIPNASFSAHNFVQGKPVILIRIDGTN
PQLPSLLLNSHTDVVPSEDSEWEWPPYAARTVFKDGELRVYARGSQDMKS
VGMQYIEALAELLRTDWRPKRTIFISFVPDEEIGGRDGMGKLVDSVLFQR
MNVGVALDEGLPRYDGNFSCYYGERQTWWLAVNVSDRPGHGSNLPETTAA
STLNEIINKAMHFRKQQQRRLESGIDMGQIIGVNVAYLKSGHPDEHVSSG
FIMNLIPSVAAAGFDIRVPPTVDAKEVDEEIERWLACDDSKRCPGVTTEW
VIKVENSHVTSRDTEKNPYAAPFMSGLEKAGLGHRLNHGIFKAATDARYL
RMKGIPSFGFSPINKSPDLLHKHNEYLPVDTYLRGIRIYQNIIRDIADFN
SSSLEYDSSSTSSDTCKDSHDEQEAAEKRILNEEKEDL*
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mRNA from alignment at tig00004439_pilon:1288431..1289897-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil1959.t1 ID=Gchil1959.t1|Name=Gchil1959.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1467bp|location=Sequence derived from alignment at tig00004439_pilon:1288431..1289897- (Gracilaria chilensis NLEC103_M9 male)
ATGCTGCTGTCATCCCGCCTTATCGCAACCTTTTTGGTCCTGCTAACAGC
TCCGATTCTCTATGTTAGTCGCAAAAAGATCTCTGTAGAACTTTCGCCCA
GCGTAACTCCCGTCGCCCCTTCAATACACCGTCTTCAGGAGTACCTTCGC
ATTCGAACCGATCATCCAAACCCATCTTATCTCGAGGCTCAGTACTTTCT
GAATCGAACAGTCGCTTCCTTAATACCGAATGCCTCGTTCTCAGCGCACA
ACTTTGTACAAGGAAAGCCGGTTATCCTAATAAGGATTGACGGAACCAAT
CCGCAACTACCTTCGCTTCTTCTCAATTCTCATACCGACGTTGTTCCTTC
AGAAGATTCCGAGTGGGAGTGGCCTCCATATGCTGCCCGTACTGTATTTA
AAGATGGTGAGCTTCGAGTTTATGCGCGCGGATCGCAGGATATGAAAAGC
GTTGGTATGCAATACATAGAAGCGCTTGCCGAACTTTTGCGCACTGATTG
GCGACCAAAGCGCACCATATTCATATCGTTCGTACCAGACGAAGAGATAG
GCGGCAGAGACGGCATGGGTAAACTGGTTGACAGTGTGCTGTTTCAACGC
ATGAATGTTGGCGTGGCCCTGGACGAGGGATTGCCAAGATATGATGGCAA
CTTTAGCTGCTATTACGGCGAGCGTCAAACTTGGTGGCTTGCTGTAAACG
TTAGTGATCGTCCAGGTCATGGGTCGAATCTGCCGGAAACCACAGCCGCC
TCAACGCTGAATGAAATCATTAACAAAGCAATGCATTTCAGAAAGCAGCA
GCAACGACGGTTGGAATCGGGAATTGATATGGGTCAAATCATTGGCGTAA
ATGTGGCGTACTTGAAGTCCGGACATCCTGACGAACATGTGTCCAGTGGA
TTTATCATGAACCTTATTCCGTCCGTCGCTGCTGCTGGATTTGATATTCG
CGTCCCGCCCACCGTTGATGCGAAAGAAGTAGACGAGGAGATTGAACGTT
GGCTAGCATGTGATGATTCGAAAAGATGTCCTGGCGTGACCACTGAATGG
GTCATCAAAGTCGAGAATTCTCATGTAACAAGTCGCGATACTGAGAAGAA
CCCGTACGCAGCTCCGTTTATGAGCGGTCTCGAAAAGGCGGGGCTTGGCC
ATCGTCTAAATCACGGCATCTTTAAAGCTGCTACAGACGCCCGATACTTG
AGGATGAAGGGTATTCCAAGTTTTGGCTTTTCTCCTATAAATAAGTCTCC
GGACTTATTGCATAAGCATAATGAATATCTTCCGGTCGATACTTACTTGC
GAGGCATTCGTATTTATCAGAACATAATTCGTGATATAGCAGACTTCAAC
TCGTCGTCATTGGAATACGACTCGTCTTCAACATCATCCGATACATGTAA
AGATTCTCATGATGAACAGGAAGCCGCTGAGAAGCGCATACTGAACGAGG
AGAAGGAGGATCTATGA
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Coding sequence (CDS) from alignment at tig00004439_pilon:1288431..1289897-

>Gchil1959.t1 ID=Gchil1959.t1|Name=Gchil1959.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1467bp|location=Sequence derived from alignment at tig00004439_pilon:1288431..1289897- (Gracilaria chilensis NLEC103_M9 male)
ATGCTGCTGTCATCCCGCCTTATCGCAACCTTTTTGGTCCTGCTAACAGC
TCCGATTCTCTATGTTAGTCGCAAAAAGATCTCTGTAGAACTTTCGCCCA
GCGTAACTCCCGTCGCCCCTTCAATACACCGTCTTCAGGAGTACCTTCGC
ATTCGAACCGATCATCCAAACCCATCTTATCTCGAGGCTCAGTACTTTCT
GAATCGAACAGTCGCTTCCTTAATACCGAATGCCTCGTTCTCAGCGCACA
ACTTTGTACAAGGAAAGCCGGTTATCCTAATAAGGATTGACGGAACCAAT
CCGCAACTACCTTCGCTTCTTCTCAATTCTCATACCGACGTTGTTCCTTC
AGAAGATTCCGAGTGGGAGTGGCCTCCATATGCTGCCCGTACTGTATTTA
AAGATGGTGAGCTTCGAGTTTATGCGCGCGGATCGCAGGATATGAAAAGC
GTTGGTATGCAATACATAGAAGCGCTTGCCGAACTTTTGCGCACTGATTG
GCGACCAAAGCGCACCATATTCATATCGTTCGTACCAGACGAAGAGATAG
GCGGCAGAGACGGCATGGGTAAACTGGTTGACAGTGTGCTGTTTCAACGC
ATGAATGTTGGCGTGGCCCTGGACGAGGGATTGCCAAGATATGATGGCAA
CTTTAGCTGCTATTACGGCGAGCGTCAAACTTGGTGGCTTGCTGTAAACG
TTAGTGATCGTCCAGGTCATGGGTCGAATCTGCCGGAAACCACAGCCGCC
TCAACGCTGAATGAAATCATTAACAAAGCAATGCATTTCAGAAAGCAGCA
GCAACGACGGTTGGAATCGGGAATTGATATGGGTCAAATCATTGGCGTAA
ATGTGGCGTACTTGAAGTCCGGACATCCTGACGAACATGTGTCCAGTGGA
TTTATCATGAACCTTATTCCGTCCGTCGCTGCTGCTGGATTTGATATTCG
CGTCCCGCCCACCGTTGATGCGAAAGAAGTAGACGAGGAGATTGAACGTT
GGCTAGCATGTGATGATTCGAAAAGATGTCCTGGCGTGACCACTGAATGG
GTCATCAAAGTCGAGAATTCTCATGTAACAAGTCGCGATACTGAGAAGAA
CCCGTACGCAGCTCCGTTTATGAGCGGTCTCGAAAAGGCGGGGCTTGGCC
ATCGTCTAAATCACGGCATCTTTAAAGCTGCTACAGACGCCCGATACTTG
AGGATGAAGGGTATTCCAAGTTTTGGCTTTTCTCCTATAAATAAGTCTCC
GGACTTATTGCATAAGCATAATGAATATCTTCCGGTCGATACTTACTTGC
GAGGCATTCGTATTTATCAGAACATAATTCGTGATATAGCAGACTTCAAC
TCGTCGTCATTGGAATACGACTCGTCTTCAACATCATCCGATACATGTAA
AGATTCTCATGATGAACAGGAAGCCGCTGAGAAGCGCATACTGAACGAGG
AGAAGGAGGATCTATGA
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