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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005708926.1 |
| Preferred name | MEF1 |
| PFAMs | EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K02355 |
| GOs | GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019538,GO:0031974,GO:0032543,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0043021,GO:0043022,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0046872,GO:0061745,GO:0070013,GO:0070125,GO:0071704,GO:0097159,GO:0097367,GO:0140053,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 |
| Evalue | 1.41e-304 |
| EggNOG OGs | COG0480@1|root,KOG0465@2759|Eukaryota |
| Description | translation elongation factor activity |
| COG category | J |
| BRITE | ko00000,ko03012,ko03029 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil1538.t1 ID=Gchil1538.t1|Name=Gchil1538.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=744bp MFFSKRPFLGPSAISVAWRPFARFSTNVGAVLQELSDADADRLEKQRNIG ISAHIDSGKTTLTERILFYTGRIRSIHEVKGKDGVGAKMDSMDLEREKGI TIASAATHASWDGNNINIIDTPGHVDFTIEVERALRVLDGAILVLCGVSG VQSQSLTVDRQMKRYGVPRVTFINKLDRAGSDPWRIIDQVEKKLGLRVAA IHVPIGLEADLSGIVDIIRREAIFFDGPNGETIRNGPIPSDLVGVVEEKR KSLIETLADVDEILGDKYLMEEDITEDDIHNAIRRSTLQKNFSPVMMGSA LKNTGVQTLLDGVIRYLPNPAERENFALQSITKEGTSEVEEEKVILSSDS SDPLVSLAFKLEESRFGQLTYLRIYQGALRKGDVVINTRTKKKVKVPRLV RMHSNEMEEIQEAYAGDICAMFGMECASGDTFVSASEPKPISMESLFVPD AVMSLAVVPKKKDSGSSNFTKALNRFTREDPTFRVHMDPESKQTIISGMG ELHLQIYVERMLREYNIDLEVGAPRVNYRETIRSRANFNYTHKKQSGGAG QFAALEGYLEPSEDGVSVEFRNGLIGNNVPPGFLPAIEKGFAEALTEGSL TGHRVQGVRMVILDGKTHPVDSNELSFRMASIQGFRQAFLKAKAAVLEPI MKVAVEVPTEFQGTVMGGLSKRRGIISSSSAHSDYGSIVAEVPLGQMFGY STELRSMTQGKGEYSMEYLQHRVLPDAEELITAYKEKKAAGRK* back to topspliced messenger RNA >Gchil1538.t1 ID=Gchil1538.t1|Name=Gchil1538.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2232bp|location=Sequence derived from alignment at tig00004403_pilon:814081..816518- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTTTTTCTCCAAGAGGCCTTTTCTTGGACCGAGCGCAATATCTGTGGC ATGGAGGCCATTTGCTAGGTTTTCGACAAATGTCGGGGCCGTTCTACAAG AACTGTCTGATGCTGACGCTGATCGGCTTGAAAAACAACGTAACATCGGA ATTTCAGCTCATATTGATTCAGGAAAGACCACTTTAACTGAGCGTATCTT GTTTTATACCGGAAGAATACGCTCGATTCATGAGGTCAAAGGTAAAGATG GAGTGGGAGCAAAAATGGACAGTATGGATCTAGAACGGGAAAAAGGAATA ACAATCGCTTCAGCTGCCACGCACGCCTCTTGGGATGGGAACAACATAAA CATTATTGACACCCCCGGGCATGTAGATTTTACAATTGAAGTCGAAAGAG CATTGCGTGTACTGGATGGAGCTATTCTTGTGTTGTGCGGCGTGTCCGGC GTTCAGAGTCAAAGTCTCACAGTCGATCGCCAGATGAAGAGATATGGTGT ACCTCGTGTGACATTCATCAACAAACTTGATCGCGCTGGTTCCGATCCAT GGAGGATTATTGATCAGGTAGAAAAAAAGCTTGGTTTACGTGTGGCCGCC ATACATGTTCCTATTGGCCTAGAAGCCGATCTCAGCGGAATTGTTGATAT TATTCGTAGAGAAGCCATTTTCTTCGATGGCCCTAATGGTGAGACCATTC GCAACGGCCCAATACCTTCTGATCTCGTTGGTGTTGTTGAGGAGAAACGA AAGTCTCTTATCGAGACATTAGCTGACGTTGACGAAATACTTGGAGACAA GTATCTTATGGAAGAGGATATCACAGAAGATGATATTCACAATGCAATCC GGAGATCGACTTTACAGAAGAACTTCTCTCCCGTTATGATGGGGAGTGCC TTGAAGAATACTGGCGTTCAAACATTGTTGGATGGTGTTATTCGATATCT TCCCAACCCTGCGGAAAGGGAGAATTTTGCGCTACAGAGTATCACGAAGG AAGGAACCTCAGAAGTAGAAGAAGAGAAGGTCATTTTATCTTCCGATTCT TCGGACCCCCTTGTTTCTCTCGCATTCAAACTTGAAGAGAGTCGTTTTGG CCAACTTACATACCTTCGTATATACCAAGGTGCATTACGAAAAGGAGACG TAGTGATCAACACCCGCACGAAAAAGAAAGTTAAAGTGCCCCGACTTGTG CGGATGCATTCCAATGAGATGGAGGAAATCCAGGAAGCATACGCAGGTGA CATTTGTGCCATGTTTGGAATGGAATGTGCATCAGGTGATACGTTTGTCT CCGCGTCGGAACCGAAACCTATCAGCATGGAGTCTCTGTTCGTCCCTGAC GCGGTCATGAGTCTTGCAGTCGTACCGAAGAAGAAGGACAGTGGATCTAG CAATTTCACAAAAGCTTTGAACAGGTTTACACGTGAAGACCCTACATTCC GCGTCCACATGGACCCCGAATCGAAGCAGACTATCATTTCGGGAATGGGA GAGCTTCATCTGCAAATTTACGTCGAACGAATGCTTCGCGAATACAACAT TGATTTGGAGGTTGGAGCACCCCGCGTAAATTATAGAGAAACCATTCGGA GTCGCGCAAACTTCAATTACACGCACAAGAAACAGTCGGGAGGTGCTGGT CAATTTGCTGCCTTAGAAGGTTATCTTGAACCCTCTGAGGACGGGGTGTC TGTCGAGTTCAGAAATGGGCTGATTGGAAACAATGTCCCGCCAGGTTTCC TCCCAGCCATCGAAAAGGGGTTTGCTGAGGCCCTTACAGAGGGTTCTTTG ACTGGCCATCGCGTCCAGGGCGTACGAATGGTAATTCTGGACGGGAAAAC GCATCCAGTCGATTCGAATGAGTTATCCTTCAGAATGGCTTCGATTCAGG GCTTCAGGCAAGCCTTCCTGAAAGCTAAAGCGGCTGTCTTGGAACCGATA ATGAAGGTTGCGGTTGAAGTCCCAACTGAATTTCAAGGAACAGTCATGGG CGGTTTATCAAAGAGGAGGGGAATTATTTCCAGTTCCTCTGCTCATTCCG ATTATGGATCAATTGTTGCTGAAGTACCTCTGGGTCAAATGTTTGGATAC TCAACTGAACTCCGAAGCATGACTCAGGGAAAGGGCGAATATTCCATGGA ATATCTCCAGCATAGGGTCTTGCCTGATGCAGAAGAACTGATTACAGCTT ACAAAGAGAAGAAAGCTGCTGGCAGAAAGTAG back to topprotein sequence of Gchil1538.t1 >Gchil1538.t1 ID=Gchil1538.t1|Name=Gchil1538.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=744bp
MFFSKRPFLGPSAISVAWRPFARFSTNVGAVLQELSDADADRLEKQRNIG ISAHIDSGKTTLTERILFYTGRIRSIHEVKGKDGVGAKMDSMDLEREKGI TIASAATHASWDGNNINIIDTPGHVDFTIEVERALRVLDGAILVLCGVSG VQSQSLTVDRQMKRYGVPRVTFINKLDRAGSDPWRIIDQVEKKLGLRVAA IHVPIGLEADLSGIVDIIRREAIFFDGPNGETIRNGPIPSDLVGVVEEKR KSLIETLADVDEILGDKYLMEEDITEDDIHNAIRRSTLQKNFSPVMMGSA LKNTGVQTLLDGVIRYLPNPAERENFALQSITKEGTSEVEEEKVILSSDS SDPLVSLAFKLEESRFGQLTYLRIYQGALRKGDVVINTRTKKKVKVPRLV RMHSNEMEEIQEAYAGDICAMFGMECASGDTFVSASEPKPISMESLFVPD AVMSLAVVPKKKDSGSSNFTKALNRFTREDPTFRVHMDPESKQTIISGMG ELHLQIYVERMLREYNIDLEVGAPRVNYRETIRSRANFNYTHKKQSGGAG QFAALEGYLEPSEDGVSVEFRNGLIGNNVPPGFLPAIEKGFAEALTEGSL TGHRVQGVRMVILDGKTHPVDSNELSFRMASIQGFRQAFLKAKAAVLEPI MKVAVEVPTEFQGTVMGGLSKRRGIISSSSAHSDYGSIVAEVPLGQMFGY STELRSMTQGKGEYSMEYLQHRVLPDAEELITAYKEKKAAGRK* back to topmRNA from alignment at tig00004403_pilon:814081..816518- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil1538.t1 ID=Gchil1538.t1|Name=Gchil1538.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2438bp|location=Sequence derived from alignment at tig00004403_pilon:814081..816518- (Gracilaria chilensis NLEC103_M9 male) ATGTTTTTCTCCAAGAGGCCTTTTCTTGGACCGAGCGCAATATCTGTGGC
ATGGAGGCCATTTGCTAGGTTTTCGACAAATGTCGGGGCCGTTCTACAAG
AACTGTCTGATGCTGACGCTGATCGGCTTGAAAAACAACGTAACATCGGA
ATTTCAGCTCATATTGATTCAGGAAAGACCACTTTAACTGAGCGTATCTT
GTTTTATACCGGAAGAATACGCTCGATTCATGAGGTCAAAGGTAAAGATG
GAGTGGGAGCAAAAATGGACAGTATGGATCTAGAACGGGAAAAAGGTACA
GTTGAATGACGCATGTGAAAGAATATTCTGTAAACCAGTCGCTAAGCCCA
ACTCTGACACCCTGTGTTCGACCATTTAACTTTTTCCAGGAATAACAATC
GCTTCAGCTGCCACGCACGCCTCTTGGGATGGGAACAACATAAACATTAT
TGACACCCCCGGGTAAGTTGCACAATTAGATGGTATCGCAATTTCCATTT
CGCTCATGAGATGCTGACTATCAATATGAAAACGCTCTCGAATTTCCTGT
TTCACTTCTTGTGCTTTGCAACAGGCATGTAGATTTTACAATTGAAGTCG
AAAGAGCATTGCGTGTACTGGATGGAGCTATTCTTGTGTTGTGCGGCGTG
TCCGGCGTTCAGAGTCAAAGTCTCACAGTCGATCGCCAGATGAAGAGATA
TGGTGTACCTCGTGTGACATTCATCAACAAACTTGATCGCGCTGGTTCCG
ATCCATGGAGGATTATTGATCAGGTAGAAAAAAAGCTTGGTTTACGTGTG
GCCGCCATACATGTTCCTATTGGCCTAGAAGCCGATCTCAGCGGAATTGT
TGATATTATTCGTAGAGAAGCCATTTTCTTCGATGGCCCTAATGGTGAGA
CCATTCGCAACGGCCCAATACCTTCTGATCTCGTTGGTGTTGTTGAGGAG
AAACGAAAGTCTCTTATCGAGACATTAGCTGACGTTGACGAAATACTTGG
AGACAAGTATCTTATGGAAGAGGATATCACAGAAGATGATATTCACAATG
CAATCCGGAGATCGACTTTACAGAAGAACTTCTCTCCCGTTATGATGGGG
AGTGCCTTGAAGAATACTGGCGTTCAAACATTGTTGGATGGTGTTATTCG
ATATCTTCCCAACCCTGCGGAAAGGGAGAATTTTGCGCTACAGAGTATCA
CGAAGGAAGGAACCTCAGAAGTAGAAGAAGAGAAGGTCATTTTATCTTCC
GATTCTTCGGACCCCCTTGTTTCTCTCGCATTCAAACTTGAAGAGAGTCG
TTTTGGCCAACTTACATACCTTCGTATATACCAAGGTGCATTACGAAAAG
GAGACGTAGTGATCAACACCCGCACGAAAAAGAAAGTTAAAGTGCCCCGA
CTTGTGCGGATGCATTCCAATGAGATGGAGGAAATCCAGGAAGCATACGC
AGGTGACATTTGTGCCATGTTTGGAATGGAATGTGCATCAGGTGATACGT
TTGTCTCCGCGTCGGAACCGAAACCTATCAGCATGGAGTCTCTGTTCGTC
CCTGACGCGGTCATGAGTCTTGCAGTCGTACCGAAGAAGAAGGACAGTGG
ATCTAGCAATTTCACAAAAGCTTTGAACAGGTTTACACGTGAAGACCCTA
CATTCCGCGTCCACATGGACCCCGAATCGAAGCAGACTATCATTTCGGGA
ATGGGAGAGCTTCATCTGCAAATTTACGTCGAACGAATGCTTCGCGAATA
CAACATTGATTTGGAGGTTGGAGCACCCCGCGTAAATTATAGAGAAACCA
TTCGGAGTCGCGCAAACTTCAATTACACGCACAAGAAACAGTCGGGAGGT
GCTGGTCAATTTGCTGCCTTAGAAGGTTATCTTGAACCCTCTGAGGACGG
GGTGTCTGTCGAGTTCAGAAATGGGCTGATTGGAAACAATGTCCCGCCAG
GTTTCCTCCCAGCCATCGAAAAGGGGTTTGCTGAGGCCCTTACAGAGGGT
TCTTTGACTGGCCATCGCGTCCAGGGCGTACGAATGGTAATTCTGGACGG
GAAAACGCATCCAGTCGATTCGAATGAGTTATCCTTCAGAATGGCTTCGA
TTCAGGGCTTCAGGCAAGCCTTCCTGAAAGCTAAAGCGGCTGTCTTGGAA
CCGATAATGAAGGTTGCGGTTGAAGTCCCAACTGAATTTCAAGGAACAGT
CATGGGCGGTTTATCAAAGAGGAGGGGAATTATTTCCAGTTCCTCTGCTC
ATTCCGATTATGGATCAATTGTTGCTGAAGTACCTCTGGGTCAAATGTTT
GGATACTCAACTGAACTCCGAAGCATGACTCAGGGAAAGGGCGAATATTC
CATGGAATATCTCCAGCATAGGGTCTTGCCTGATGCAGAAGAACTGATTA
CAGCTTACAAAGAGAAGAAAGCTGCTGGCAGAAAGTAG back to topCoding sequence (CDS) from alignment at tig00004403_pilon:814081..816518- >Gchil1538.t1 ID=Gchil1538.t1|Name=Gchil1538.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2232bp|location=Sequence derived from alignment at tig00004403_pilon:814081..816518- (Gracilaria chilensis NLEC103_M9 male) ATGTTTTTCTCCAAGAGGCCTTTTCTTGGACCGAGCGCAATATCTGTGGC ATGGAGGCCATTTGCTAGGTTTTCGACAAATGTCGGGGCCGTTCTACAAG AACTGTCTGATGCTGACGCTGATCGGCTTGAAAAACAACGTAACATCGGA ATTTCAGCTCATATTGATTCAGGAAAGACCACTTTAACTGAGCGTATCTT GTTTTATACCGGAAGAATACGCTCGATTCATGAGGTCAAAGGTAAAGATG GAGTGGGAGCAAAAATGGACAGTATGGATCTAGAACGGGAAAAAGGAATA ACAATCGCTTCAGCTGCCACGCACGCCTCTTGGGATGGGAACAACATAAA CATTATTGACACCCCCGGGCATGTAGATTTTACAATTGAAGTCGAAAGAG CATTGCGTGTACTGGATGGAGCTATTCTTGTGTTGTGCGGCGTGTCCGGC GTTCAGAGTCAAAGTCTCACAGTCGATCGCCAGATGAAGAGATATGGTGT ACCTCGTGTGACATTCATCAACAAACTTGATCGCGCTGGTTCCGATCCAT GGAGGATTATTGATCAGGTAGAAAAAAAGCTTGGTTTACGTGTGGCCGCC ATACATGTTCCTATTGGCCTAGAAGCCGATCTCAGCGGAATTGTTGATAT TATTCGTAGAGAAGCCATTTTCTTCGATGGCCCTAATGGTGAGACCATTC GCAACGGCCCAATACCTTCTGATCTCGTTGGTGTTGTTGAGGAGAAACGA AAGTCTCTTATCGAGACATTAGCTGACGTTGACGAAATACTTGGAGACAA GTATCTTATGGAAGAGGATATCACAGAAGATGATATTCACAATGCAATCC GGAGATCGACTTTACAGAAGAACTTCTCTCCCGTTATGATGGGGAGTGCC TTGAAGAATACTGGCGTTCAAACATTGTTGGATGGTGTTATTCGATATCT TCCCAACCCTGCGGAAAGGGAGAATTTTGCGCTACAGAGTATCACGAAGG AAGGAACCTCAGAAGTAGAAGAAGAGAAGGTCATTTTATCTTCCGATTCT TCGGACCCCCTTGTTTCTCTCGCATTCAAACTTGAAGAGAGTCGTTTTGG CCAACTTACATACCTTCGTATATACCAAGGTGCATTACGAAAAGGAGACG TAGTGATCAACACCCGCACGAAAAAGAAAGTTAAAGTGCCCCGACTTGTG CGGATGCATTCCAATGAGATGGAGGAAATCCAGGAAGCATACGCAGGTGA CATTTGTGCCATGTTTGGAATGGAATGTGCATCAGGTGATACGTTTGTCT CCGCGTCGGAACCGAAACCTATCAGCATGGAGTCTCTGTTCGTCCCTGAC GCGGTCATGAGTCTTGCAGTCGTACCGAAGAAGAAGGACAGTGGATCTAG CAATTTCACAAAAGCTTTGAACAGGTTTACACGTGAAGACCCTACATTCC GCGTCCACATGGACCCCGAATCGAAGCAGACTATCATTTCGGGAATGGGA GAGCTTCATCTGCAAATTTACGTCGAACGAATGCTTCGCGAATACAACAT TGATTTGGAGGTTGGAGCACCCCGCGTAAATTATAGAGAAACCATTCGGA GTCGCGCAAACTTCAATTACACGCACAAGAAACAGTCGGGAGGTGCTGGT CAATTTGCTGCCTTAGAAGGTTATCTTGAACCCTCTGAGGACGGGGTGTC TGTCGAGTTCAGAAATGGGCTGATTGGAAACAATGTCCCGCCAGGTTTCC TCCCAGCCATCGAAAAGGGGTTTGCTGAGGCCCTTACAGAGGGTTCTTTG ACTGGCCATCGCGTCCAGGGCGTACGAATGGTAATTCTGGACGGGAAAAC GCATCCAGTCGATTCGAATGAGTTATCCTTCAGAATGGCTTCGATTCAGG GCTTCAGGCAAGCCTTCCTGAAAGCTAAAGCGGCTGTCTTGGAACCGATA ATGAAGGTTGCGGTTGAAGTCCCAACTGAATTTCAAGGAACAGTCATGGG CGGTTTATCAAAGAGGAGGGGAATTATTTCCAGTTCCTCTGCTCATTCCG ATTATGGATCAATTGTTGCTGAAGTACCTCTGGGTCAAATGTTTGGATAC TCAACTGAACTCCGAAGCATGACTCAGGGAAAGGGCGAATATTCCATGGA ATATCTCCAGCATAGGGTCTTGCCTGATGCAGAAGAACTGATTACAGCTT ACAAAGAGAAGAAAGCTGCTGGCAGAAAGTAG back to top
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