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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 44689.DDB0237738 |
| PFAMs | UCH |
| Max annot lvl | 554915|Amoebozoa |
| KEGG ko | ko:K11855 |
| Evalue | 5.69e-37 |
| EggNOG OGs | KOG1865@1|root,KOG1865@2759|Eukaryota,3X8SQ@554915|Amoebozoa |
| EC | 3.4.19.12 |
| Description | Belongs to the peptidase C19 family |
| COG category | O |
| BRITE | ko00000,ko01000,ko01002,ko04121 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil1411.t2 ID=Gchil1411.t2|Name=Gchil1411.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=756bp MAANQSNDVDYLSDSDDDIRSNSSSESLRPTSALLSKLLPFKKRTASDLG TRSEKRLKPTILPKIFVTLPVTGREKKVVEDINNVIHRCEPGFFNLGNTC YLNAALQCLLHCDSFVRQIKDHGAHLNGTGHKQFCVLDQLHKLVDQYFDD KSPETMNPAVFVQNIRRMCPLFVPKQQQDADEFIQLLFQAIDNIECNGCP DAPFKEQKYPDEIGLILRDSAIGYMKTTITCSSCQFSSTTRAPFTKLSIG TEEFKTLEDSLGGLMKEEILEGQNAYMCNNCNTLSAAVIKKQIDDTPNVL IIQLNRFGGNGKNDDFVEYPRVLNLHPYSSDDIVAEKYELVSSLTHHGPS MGFGHYTADVKCFDGHWCRTDDDNRSKITPSMAYGNKAYMLFYQKRTPLW ECEEFEEALELSGFVRNNANGEERGRIGTDGSSVGSSWMERVESIHVGST SSDEGGGETRVGGQIRRPLGSSRPPQIFTAPRPQGTKSNRAPHAQTGWEE HLCPGSVYSAAKDVEQCLSVPCTVFKESKRGEPMVPENQIDTQCRCQCCV GKKPMCLFTHQGETVKTGCLCQRLEKPWVVVQTSDPNEDVVADCVETSWI QQHGLEKGILRKRSASNVLCIPELPCATAGHMLRYCTSFHSTSCRLRTYA DICAERKDCTTDFVPVSRLRNSFDWSIVQSKFADGERMELTSVSVIKDSS PFSFSFVLAFIADWLSTQGLGAACDFLLVVALSIGEGGAQIGRYATGNFR VSESL* back to topspliced messenger RNA >Gchil1411.t2 ID=Gchil1411.t2|Name=Gchil1411.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2268bp|location=Sequence derived from alignment at tig00004414_pilon:747461..750625- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCAGCGAATCAGTCCAATGACGTGGACTACCTATCAGACTCTGACGA TGATATTCGAAGCAACTCATCTTCAGAAAGCTTGAGACCCACTAGTGCCT TACTTTCTAAGCTTCTCCCATTCAAAAAGCGGACGGCCTCCGACCTTGGA ACTCGTTCTGAAAAAAGGTTGAAACCAACTATTTTGCCGAAAATTTTTGT GACGCTCCCTGTGACAGGCCGAGAAAAGAAGGTAGTTGAGGACATCAATA ATGTCATCCATCGATGTGAACCAGGATTTTTTAACCTGGGAAACACCTGC TACCTTAACGCAGCTCTCCAATGCTTGCTTCACTGTGATAGTTTCGTTCG GCAGATCAAGGACCACGGCGCACATCTGAACGGCACGGGGCACAAGCAGT TCTGTGTGCTCGACCAGCTCCACAAGCTGGTAGACCAGTACTTCGATGAT AAATCTCCCGAAACCATGAACCCCGCGGTTTTCGTTCAAAATATCAGACG GATGTGTCCGCTCTTTGTTCCTAAGCAGCAACAAGATGCCGACGAATTCA TTCAGCTTTTGTTCCAAGCGATCGATAACATCGAATGCAACGGATGCCCA GACGCTCCTTTCAAAGAACAGAAATATCCTGATGAAATCGGTCTCATTCT AAGAGATTCCGCCATTGGTTACATGAAGACCACCATTACATGCAGTTCTT GTCAGTTTTCCTCTACCACTCGTGCGCCATTTACCAAGCTTTCAATAGGA ACAGAAGAATTCAAGACGTTGGAGGATTCACTGGGTGGTCTCATGAAGGA GGAGATATTGGAAGGGCAAAACGCGTACATGTGCAACAACTGTAATACCC TCTCTGCTGCTGTTATCAAGAAACAAATTGATGACACCCCCAACGTTCTT ATCATACAGTTGAATAGATTTGGTGGAAACGGGAAGAATGATGACTTTGT TGAATACCCGCGAGTGCTTAATCTACATCCGTACAGCAGCGACGACATTG TAGCCGAAAAGTATGAGTTGGTGTCATCTCTTACGCACCACGGTCCTTCC ATGGGCTTTGGCCACTACACCGCTGATGTCAAGTGTTTCGATGGACATTG GTGCCGCACGGACGATGATAATCGCTCAAAAATAACGCCATCCATGGCAT ATGGAAACAAGGCCTACATGCTGTTCTACCAAAAGAGAACACCGCTTTGG GAGTGCGAAGAGTTTGAAGAGGCCCTAGAGCTCTCTGGTTTTGTTAGGAA TAACGCCAACGGAGAAGAAAGGGGAAGAATAGGAACAGATGGAAGCAGTG TAGGAAGTAGCTGGATGGAAAGAGTGGAGAGCATTCATGTGGGCAGCACG AGCAGCGATGAAGGAGGGGGTGAGACCAGAGTGGGTGGCCAAATACGTCG CCCACTGGGAAGCTCTCGTCCGCCACAGATTTTCACTGCACCACGTCCTC AGGGAACGAAATCCAATCGTGCACCACATGCGCAAACAGGATGGGAGGAG CATCTGTGCCCTGGCTCTGTATACAGCGCAGCAAAAGACGTAGAGCAGTG TCTTTCTGTTCCCTGCACAGTTTTTAAGGAAAGCAAAAGAGGAGAGCCTA TGGTCCCAGAAAATCAGATAGATACACAATGTCGATGTCAATGCTGTGTT GGGAAGAAACCCATGTGTCTGTTCACCCATCAAGGGGAAACAGTAAAAAC TGGCTGCCTTTGCCAAAGGCTAGAAAAGCCTTGGGTAGTAGTGCAGACCT CGGATCCAAATGAAGATGTAGTGGCTGATTGCGTAGAAACATCATGGATT CAACAACATGGTCTCGAAAAGGGCATCCTTCGAAAGCGAAGCGCTTCTAA TGTGTTGTGCATCCCCGAGCTTCCATGCGCCACCGCAGGTCACATGCTTC GCTATTGCACGTCATTCCATAGCACGTCCTGTCGACTCAGAACATACGCA GACATCTGTGCAGAAAGGAAAGATTGTACAACTGACTTTGTTCCCGTTTC GCGATTGAGAAACTCTTTCGATTGGAGCATTGTTCAGAGTAAGTTTGCTG ACGGAGAAAGAATGGAGTTGACCAGCGTCAGCGTGATCAAGGATAGTAGC CCTTTTTCATTCTCTTTTGTGCTTGCATTCATTGCCGACTGGCTTTCTAC GCAGGGACTCGGGGCTGCTTGCGACTTTTTGTTAGTTGTTGCGCTTTCGA TTGGAGAAGGCGGCGCACAGATAGGAAGATATGCTACTGGAAATTTCCGA GTTTCAGAATCTCTGTAA back to topprotein sequence of Gchil1411.t2 >Gchil1411.t2 ID=Gchil1411.t2|Name=Gchil1411.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=756bp
MAANQSNDVDYLSDSDDDIRSNSSSESLRPTSALLSKLLPFKKRTASDLG TRSEKRLKPTILPKIFVTLPVTGREKKVVEDINNVIHRCEPGFFNLGNTC YLNAALQCLLHCDSFVRQIKDHGAHLNGTGHKQFCVLDQLHKLVDQYFDD KSPETMNPAVFVQNIRRMCPLFVPKQQQDADEFIQLLFQAIDNIECNGCP DAPFKEQKYPDEIGLILRDSAIGYMKTTITCSSCQFSSTTRAPFTKLSIG TEEFKTLEDSLGGLMKEEILEGQNAYMCNNCNTLSAAVIKKQIDDTPNVL IIQLNRFGGNGKNDDFVEYPRVLNLHPYSSDDIVAEKYELVSSLTHHGPS MGFGHYTADVKCFDGHWCRTDDDNRSKITPSMAYGNKAYMLFYQKRTPLW ECEEFEEALELSGFVRNNANGEERGRIGTDGSSVGSSWMERVESIHVGST SSDEGGGETRVGGQIRRPLGSSRPPQIFTAPRPQGTKSNRAPHAQTGWEE HLCPGSVYSAAKDVEQCLSVPCTVFKESKRGEPMVPENQIDTQCRCQCCV GKKPMCLFTHQGETVKTGCLCQRLEKPWVVVQTSDPNEDVVADCVETSWI QQHGLEKGILRKRSASNVLCIPELPCATAGHMLRYCTSFHSTSCRLRTYA DICAERKDCTTDFVPVSRLRNSFDWSIVQSKFADGERMELTSVSVIKDSS PFSFSFVLAFIADWLSTQGLGAACDFLLVVALSIGEGGAQIGRYATGNFR VSESL* back to topmRNA from alignment at tig00004414_pilon:747461..750625- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil1411.t2 ID=Gchil1411.t2|Name=Gchil1411.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=3165bp|location=Sequence derived from alignment at tig00004414_pilon:747461..750625- (Gracilaria chilensis NLEC103_M9 male) ATGGCAGCGAATCAGTCCAATGACGTGGACTACCTATCAGACTCTGACGA
TGATATTCGAAGCAACTCATCTTCAGAAAGCTTGAGACCCACTAGTGCCT
TACTTTCTAAGCTTCTCCCATTCAAAAAGCGGACGGCCTCCGACCTTGGA
ACTCGTTCTGAAAAAAGGTTGAAACCAACTATTTTGCCGAAAATTTTTGT
GACGCTCCCTGTGACAGGCCGAGAAAAGAAGGTAGTTGAGGACATCAATA
ATGTCATCCATCGATGTGAACCAGGATTTTTTAACCTGGGAAACACCTGC
TACCTTAACGCAGCTCTCCAATGCTTGCTTCACTGTGATAGTTTCGTTCG
GCAGATCAAGGACCACGGCGCACATCTGAACGGCACGGGGCACAAGCAGT
TCTGTGTGCTCGACCAGCTCCACAAGCTGGTAGACCAGTACTTCGATGAT
AAATCTCCCGAAACCATGAACCCCGCGGTTTTCGTTCAAAATATCAGACG
GATGTGTCCGCTCTTTGTTCCTAAGCAGCAACAAGATGCCGACGAATTCA
TTCAGCTTTTGTTCCAAGCGATCGATAACATCGAATGCAACGGATGCCCA
GACGCTCCTTTCAAAGAACAGAAATATCCTGATGAAATCGGTCTCATTCT
AAGAGATTCCGCCATTGGTTACATGAAGACCACCATTACATGCAGTTCTT
GTCAGTTTTCCTCTACCACTCGTGCGCCATTTACCAAGCTTTCAATAGGA
ACAGAAGAATTCAAGACGTTGGAGGATTCACTGGGTGGTCTCATGAAGGA
GGAGATATTGGAAGGGCAAAACGCGTACATGTGCAACAACTGTAATACCC
TCTCTGCTGCTGTTATCAAGAAACAAATTGATGACACCCCCAACGTTCTT
ATCATACAGTTGAATAGATTTGGTGGAAACGGGAAGAATGATGACTTTGT
TGAATACCCGCGAGTGCTTAATCTACATCCGTACAGCAGCGACGACATTG
TAGCCGAAAAGTATGAGTTGGTGTCATCTCTTACGCACCACGGTCCTTCC
ATGGGCTTTGGCCACTACACCGCTGATGTCAAGTGTTTCGATGGACATTG
GTGCCGCACGGACGATGATAATCGCTCAAAAATAACGCCATCCATGGCAT
ATGGAAACAAGGCCTACATGCTGTTCTACCAAAAGAGAACACCGCTTTGG
GAGTGCGAAGAGTTTGAAGAGGCCCTAGAGCTCTCTGGTTTTGTTAGGAA
TAACGCCAACGGAGAAGAAAGGGGAAGAATAGGAACAGATGGAAGCAGTG
TAGGAAGTAGCTGGATGGAAAGAGTGGAGAGCATTCATGTGGGCAGCACG
AGCAGCGATGAAGGAGGGGGTGAGACCAGAGTGGGTGGGTACGAGGGCAC
CGTTGCAAAACCTCAATTGCATGGAAAGGACAAGAAAGCTTGTTGTGACG
TTTCTTGATGATGATAAAGAACTGCTCGTGTGGGTGAATGTCCGTTAGTA
TTGTAAAAATGCACATTGATTATCAACCTCATCATGCTACAAAAAACCTT
TTCTTTGTGTAAATAGTTTTTGTGTATAGAGAAATGAAGCTTACATCTCG
AAATTTTATTTTTTGAAATTATAGGTCCCCCGAAACACCTCGAAATGCTT
GCCAGCTTTTTGTGATGAAATGGGCAAAGGTTACGATGAAGGGGGAACTA
ACCTTGCGGCAGTGTACCTGCTGCACTTGTACCGTCTACTCCTCGAAGCA
GTCTAGTGTAACCCGTCATTGTTGATGCACGTCCGAGGGCAGGTATACAG
CCCCAAGCGCAGAAGGAGCATATTTAAAAGACCTCTCTGCTGAGGGGTCT
GAAATATGTCGGGCATGTCATTGTTGATGCACGTCCGAGGACAGGTATAC
AGCCCCAAGTGCCCAAGGAGAATATTTAAAAGACCTCTCTGCTGAGGGGT
CTGAAAAATGTCGGGCATAAAGCCGATATCATGTTGTTCACTTCTAAGCT
CGGGCCGCGTTCGTGTTTGTTAAACTTCAAACCATTTGTACTTTTTGTTG
GGGTGCTGATTCTAGCTTTTTGTGCACAAGCCAGTCGCACAAAACCTTCT
AGACCACCACGACCGACTCGATCCAGCCAAATACGTCGCCCACTGGGAAG
CTCTCGTCCGCCACAGATTTTCACTGCACCACGTCCTCAGGGAACGAAAT
CCAGTACGTTCAAACTTTTGATCGCAAGAACATCTTCGAGGTTCTCTCTC
TAACTCTCCTTCTTCGCACAGATCGTGCACCACATGCGCAAACAGGATGG
GAGGAGCATCTGTGCCCTGGCTCTGTATACAGCGCAGCAAAAGACGTAGA
GCAGTGTCTTTCTGTTCCCTGCACAGTTTTTAAGGAAAGCAAAAGAGGAG
AGCCTATGGTCCCAGAAAATCAGATAGATACACAATGTCGATGTCAATGC
TGTGTTGGGGTAAGTTCTCAGCCATATATTTGCTCCACGGCTGCGCAAAT
ATTTGAATTTCGTCTAACCGAATTGCTGTTCTCTGATATCCTAAATACAG
AAGAAACCCATGTGTCTGTTCACCCATCAAGGGGAAACAGTAAAAACTGG
CTGCCTTTGCCAAAGGCTAGAAAAGCCTTGGGTAGTAGTGCAGACCTCGG
ATCCAAATGAAGATGTAGTGGCTGATTGCGTAGAAACATCATGGATTCAA
CAACATGGTCTCGAAAAGGGCATCCTTCGAAAGCGAAGCGCTTCTAATGT
GTTGTGCATCCCCGAGCTTCCATGCGCCACCGCAGGTCACATGCTTCGCT
ATTGCACGTCATTCCATAGCACGTCCTGTCGACTCAGAACATACGCAGAC
ATCTGTGCAGAAAGGAAAGATTGTACAACTGACTTTGTTCCCGTTTCGCG
ATTGAGAAACTCTTTCGATTGGAGCATTGTTCAGAGTAAGTTTGCTGACG
GAGAAAGAATGGAGTTGACCAGCGTCAGCGTGATCAAGGATAGTAGCCCT
TTTTCATTCTCTTTTGTGCTTGCATTCATTGCCGACTGGCTTTCTACGCA
GGGACTCGGGGCTGCTTGCGACTTTTTGTTAGTTGTTGCGCTTTCGATTG
GAGAAGGCGGCGCACAGATAGGAAGATATGCTACTGGAAATTTCCGAGTT
TCAGAATCTCTGTAA back to topCoding sequence (CDS) from alignment at tig00004414_pilon:747461..750625- >Gchil1411.t2 ID=Gchil1411.t2|Name=Gchil1411.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2268bp|location=Sequence derived from alignment at tig00004414_pilon:747461..750625- (Gracilaria chilensis NLEC103_M9 male) ATGGCAGCGAATCAGTCCAATGACGTGGACTACCTATCAGACTCTGACGA TGATATTCGAAGCAACTCATCTTCAGAAAGCTTGAGACCCACTAGTGCCT TACTTTCTAAGCTTCTCCCATTCAAAAAGCGGACGGCCTCCGACCTTGGA ACTCGTTCTGAAAAAAGGTTGAAACCAACTATTTTGCCGAAAATTTTTGT GACGCTCCCTGTGACAGGCCGAGAAAAGAAGGTAGTTGAGGACATCAATA ATGTCATCCATCGATGTGAACCAGGATTTTTTAACCTGGGAAACACCTGC TACCTTAACGCAGCTCTCCAATGCTTGCTTCACTGTGATAGTTTCGTTCG GCAGATCAAGGACCACGGCGCACATCTGAACGGCACGGGGCACAAGCAGT TCTGTGTGCTCGACCAGCTCCACAAGCTGGTAGACCAGTACTTCGATGAT AAATCTCCCGAAACCATGAACCCCGCGGTTTTCGTTCAAAATATCAGACG GATGTGTCCGCTCTTTGTTCCTAAGCAGCAACAAGATGCCGACGAATTCA TTCAGCTTTTGTTCCAAGCGATCGATAACATCGAATGCAACGGATGCCCA GACGCTCCTTTCAAAGAACAGAAATATCCTGATGAAATCGGTCTCATTCT AAGAGATTCCGCCATTGGTTACATGAAGACCACCATTACATGCAGTTCTT GTCAGTTTTCCTCTACCACTCGTGCGCCATTTACCAAGCTTTCAATAGGA ACAGAAGAATTCAAGACGTTGGAGGATTCACTGGGTGGTCTCATGAAGGA GGAGATATTGGAAGGGCAAAACGCGTACATGTGCAACAACTGTAATACCC TCTCTGCTGCTGTTATCAAGAAACAAATTGATGACACCCCCAACGTTCTT ATCATACAGTTGAATAGATTTGGTGGAAACGGGAAGAATGATGACTTTGT TGAATACCCGCGAGTGCTTAATCTACATCCGTACAGCAGCGACGACATTG TAGCCGAAAAGTATGAGTTGGTGTCATCTCTTACGCACCACGGTCCTTCC ATGGGCTTTGGCCACTACACCGCTGATGTCAAGTGTTTCGATGGACATTG GTGCCGCACGGACGATGATAATCGCTCAAAAATAACGCCATCCATGGCAT ATGGAAACAAGGCCTACATGCTGTTCTACCAAAAGAGAACACCGCTTTGG GAGTGCGAAGAGTTTGAAGAGGCCCTAGAGCTCTCTGGTTTTGTTAGGAA TAACGCCAACGGAGAAGAAAGGGGAAGAATAGGAACAGATGGAAGCAGTG TAGGAAGTAGCTGGATGGAAAGAGTGGAGAGCATTCATGTGGGCAGCACG AGCAGCGATGAAGGAGGGGGTGAGACCAGAGTGGGTGGCCAAATACGTCG CCCACTGGGAAGCTCTCGTCCGCCACAGATTTTCACTGCACCACGTCCTC AGGGAACGAAATCCAATCGTGCACCACATGCGCAAACAGGATGGGAGGAG CATCTGTGCCCTGGCTCTGTATACAGCGCAGCAAAAGACGTAGAGCAGTG TCTTTCTGTTCCCTGCACAGTTTTTAAGGAAAGCAAAAGAGGAGAGCCTA TGGTCCCAGAAAATCAGATAGATACACAATGTCGATGTCAATGCTGTGTT GGGAAGAAACCCATGTGTCTGTTCACCCATCAAGGGGAAACAGTAAAAAC TGGCTGCCTTTGCCAAAGGCTAGAAAAGCCTTGGGTAGTAGTGCAGACCT CGGATCCAAATGAAGATGTAGTGGCTGATTGCGTAGAAACATCATGGATT CAACAACATGGTCTCGAAAAGGGCATCCTTCGAAAGCGAAGCGCTTCTAA TGTGTTGTGCATCCCCGAGCTTCCATGCGCCACCGCAGGTCACATGCTTC GCTATTGCACGTCATTCCATAGCACGTCCTGTCGACTCAGAACATACGCA GACATCTGTGCAGAAAGGAAAGATTGTACAACTGACTTTGTTCCCGTTTC GCGATTGAGAAACTCTTTCGATTGGAGCATTGTTCAGAGTAAGTTTGCTG ACGGAGAAAGAATGGAGTTGACCAGCGTCAGCGTGATCAAGGATAGTAGC CCTTTTTCATTCTCTTTTGTGCTTGCATTCATTGCCGACTGGCTTTCTAC GCAGGGACTCGGGGCTGCTTGCGACTTTTTGTTAGTTGTTGCGCTTTCGA TTGGAGAAGGCGGCGCACAGATAGGAAGATATGCTACTGGAAATTTCCGA GTTTCAGAATCTCTGTAA back to top
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