Gchil1385.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil1385.t1
Unique NameGchil1385.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length493
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004414_piloncontigtig00004414_pilon:227887..229365 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1385Gchil1385Gracilaria chilensis NLEC103_M9 malegenetig00004414_pilon 227887..229365 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1385.t1.stop1Gchil1385.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004414_pilon 227887..227889 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1385.t1.CDS1Gchil1385.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004414_pilon 227887..229365 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1385.t1.exon1Gchil1385.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004414_pilon 227887..229365 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1385.t1.start1Gchil1385.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004414_pilon 229363..229365 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1385.t1Gchil1385.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004414_pilon 227887..229365 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil1385.t1 ID=Gchil1385.t1|Name=Gchil1385.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=493bp
MTIETSLPVPVFNVIKYLLLTFSIDVLVRGGLDSFEHFRRRLFLYYGLSV
DFGNRRIDRYNLIHRFRTRNIGPPVLLTLLTVAAYAVEISLEFSSDSRMG
RIPIAGKVTRLNFTRGICSLDSIIYRTNANRFARLAEECIIHENGIYRLY
RPIWTTSPEDSFRPLCEPTLSNLVYETTDVYETLQGKGKKAQQENEQLSH
TMRAHSYKSNGDEERSFVTMRITSKDIVGSFPYSFASDDFTSSVFIKRLG
DSKVKCFGTVYGRHGEGMMRVMMLGCTNGFTENSTLSYAQGTGVVELDVE
DIEKNWIALIAVESRRNVYRFAKGVIDYNPETNPIAYAAFLAISRAQEKI
NVNKYAIAYRNCDRLSLPSRNADTWEETVEASSSIPRNTATIEQWAIILV
ICWVVFVTAFRFALHLLADRKGMPKRLYGEKDIVSLWTYEKERESLAECR
DGCPKRSKNGYLSVHIGSVCDYITATKNEGNILRDRRKSFAP*
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spliced messenger RNA

>Gchil1385.t1 ID=Gchil1385.t1|Name=Gchil1385.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1479bp|location=Sequence derived from alignment at tig00004414_pilon:227887..229365- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTATCGAAACGAGCCTGCCAGTACCGGTCTTCAACGTTATCAAGTA
CCTTCTTCTAACTTTCTCTATCGATGTTTTGGTTCGCGGTGGTCTGGACA
GCTTCGAACACTTTCGACGCCGTCTCTTTCTTTATTACGGCCTATCTGTT
GATTTCGGAAACCGTCGGATAGATCGCTACAACCTAATTCACCGCTTTCG
CACTCGAAACATTGGCCCACCAGTTCTACTCACACTGCTAACGGTGGCTG
CGTACGCAGTCGAGATCAGTCTTGAATTCTCATCTGACTCTCGTATGGGT
CGTATTCCAATCGCCGGAAAGGTAACGCGCTTGAATTTTACGCGCGGAAT
ATGCTCTCTAGACAGTATCATCTATCGTACCAATGCCAACCGATTTGCTC
GACTTGCAGAAGAATGCATAATTCACGAAAATGGCATCTACAGACTGTAT
CGCCCAATATGGACCACTAGTCCAGAGGATTCGTTCAGACCTTTATGCGA
GCCCACTTTGTCAAACCTAGTCTACGAAACCACCGATGTTTATGAGACTC
TGCAAGGAAAAGGTAAAAAAGCTCAACAAGAGAATGAACAGCTCAGTCAC
ACAATGCGCGCACATTCCTATAAGTCCAATGGTGATGAAGAGCGCTCATT
CGTAACAATGCGCATTACATCGAAGGATATAGTCGGCAGTTTTCCCTATT
CTTTCGCTTCTGATGATTTCACGTCCTCCGTTTTTATTAAGCGTCTGGGT
GACTCGAAAGTGAAGTGCTTTGGAACTGTCTATGGCCGACACGGCGAAGG
AATGATGAGAGTAATGATGCTTGGCTGCACAAATGGTTTCACCGAAAACA
GCACGCTTTCCTACGCACAAGGAACGGGTGTGGTGGAATTGGACGTCGAG
GACATTGAAAAGAATTGGATAGCTCTCATCGCTGTGGAAAGCCGTAGAAA
TGTGTATCGCTTTGCAAAAGGAGTCATCGACTACAACCCAGAGACGAACC
CTATAGCGTATGCTGCGTTTTTGGCGATATCGAGAGCGCAGGAAAAGATC
AATGTCAATAAGTATGCCATTGCATACCGCAACTGCGATAGGTTGTCCCT
CCCATCTCGAAATGCAGATACATGGGAGGAAACTGTGGAGGCCTCGAGCT
CTATCCCTCGAAATACAGCGACGATAGAACAATGGGCCATCATTCTTGTT
ATATGTTGGGTTGTATTCGTCACAGCTTTCAGATTTGCTTTACATTTGTT
GGCAGATCGCAAAGGAATGCCGAAGCGGTTGTATGGTGAGAAAGATATTG
TCAGCCTTTGGACCTATGAAAAGGAGAGAGAATCGCTGGCTGAGTGCAGA
GATGGGTGCCCAAAAAGAAGCAAGAACGGATATTTATCTGTTCATATTGG
AAGTGTATGTGACTACATAACCGCAACAAAAAATGAGGGGAATATCCTTC
GTGACCGGCGAAAAAGTTTCGCACCGTGA
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protein sequence of Gchil1385.t1

>Gchil1385.t1 ID=Gchil1385.t1|Name=Gchil1385.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=493bp
MTIETSLPVPVFNVIKYLLLTFSIDVLVRGGLDSFEHFRRRLFLYYGLSV
DFGNRRIDRYNLIHRFRTRNIGPPVLLTLLTVAAYAVEISLEFSSDSRMG
RIPIAGKVTRLNFTRGICSLDSIIYRTNANRFARLAEECIIHENGIYRLY
RPIWTTSPEDSFRPLCEPTLSNLVYETTDVYETLQGKGKKAQQENEQLSH
TMRAHSYKSNGDEERSFVTMRITSKDIVGSFPYSFASDDFTSSVFIKRLG
DSKVKCFGTVYGRHGEGMMRVMMLGCTNGFTENSTLSYAQGTGVVELDVE
DIEKNWIALIAVESRRNVYRFAKGVIDYNPETNPIAYAAFLAISRAQEKI
NVNKYAIAYRNCDRLSLPSRNADTWEETVEASSSIPRNTATIEQWAIILV
ICWVVFVTAFRFALHLLADRKGMPKRLYGEKDIVSLWTYEKERESLAECR
DGCPKRSKNGYLSVHIGSVCDYITATKNEGNILRDRRKSFAP*
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mRNA from alignment at tig00004414_pilon:227887..229365-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil1385.t1 ID=Gchil1385.t1|Name=Gchil1385.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1479bp|location=Sequence derived from alignment at tig00004414_pilon:227887..229365- (Gracilaria chilensis NLEC103_M9 male)
ATGACTATCGAAACGAGCCTGCCAGTACCGGTCTTCAACGTTATCAAGTA
CCTTCTTCTAACTTTCTCTATCGATGTTTTGGTTCGCGGTGGTCTGGACA
GCTTCGAACACTTTCGACGCCGTCTCTTTCTTTATTACGGCCTATCTGTT
GATTTCGGAAACCGTCGGATAGATCGCTACAACCTAATTCACCGCTTTCG
CACTCGAAACATTGGCCCACCAGTTCTACTCACACTGCTAACGGTGGCTG
CGTACGCAGTCGAGATCAGTCTTGAATTCTCATCTGACTCTCGTATGGGT
CGTATTCCAATCGCCGGAAAGGTAACGCGCTTGAATTTTACGCGCGGAAT
ATGCTCTCTAGACAGTATCATCTATCGTACCAATGCCAACCGATTTGCTC
GACTTGCAGAAGAATGCATAATTCACGAAAATGGCATCTACAGACTGTAT
CGCCCAATATGGACCACTAGTCCAGAGGATTCGTTCAGACCTTTATGCGA
GCCCACTTTGTCAAACCTAGTCTACGAAACCACCGATGTTTATGAGACTC
TGCAAGGAAAAGGTAAAAAAGCTCAACAAGAGAATGAACAGCTCAGTCAC
ACAATGCGCGCACATTCCTATAAGTCCAATGGTGATGAAGAGCGCTCATT
CGTAACAATGCGCATTACATCGAAGGATATAGTCGGCAGTTTTCCCTATT
CTTTCGCTTCTGATGATTTCACGTCCTCCGTTTTTATTAAGCGTCTGGGT
GACTCGAAAGTGAAGTGCTTTGGAACTGTCTATGGCCGACACGGCGAAGG
AATGATGAGAGTAATGATGCTTGGCTGCACAAATGGTTTCACCGAAAACA
GCACGCTTTCCTACGCACAAGGAACGGGTGTGGTGGAATTGGACGTCGAG
GACATTGAAAAGAATTGGATAGCTCTCATCGCTGTGGAAAGCCGTAGAAA
TGTGTATCGCTTTGCAAAAGGAGTCATCGACTACAACCCAGAGACGAACC
CTATAGCGTATGCTGCGTTTTTGGCGATATCGAGAGCGCAGGAAAAGATC
AATGTCAATAAGTATGCCATTGCATACCGCAACTGCGATAGGTTGTCCCT
CCCATCTCGAAATGCAGATACATGGGAGGAAACTGTGGAGGCCTCGAGCT
CTATCCCTCGAAATACAGCGACGATAGAACAATGGGCCATCATTCTTGTT
ATATGTTGGGTTGTATTCGTCACAGCTTTCAGATTTGCTTTACATTTGTT
GGCAGATCGCAAAGGAATGCCGAAGCGGTTGTATGGTGAGAAAGATATTG
TCAGCCTTTGGACCTATGAAAAGGAGAGAGAATCGCTGGCTGAGTGCAGA
GATGGGTGCCCAAAAAGAAGCAAGAACGGATATTTATCTGTTCATATTGG
AAGTGTATGTGACTACATAACCGCAACAAAAAATGAGGGGAATATCCTTC
GTGACCGGCGAAAAAGTTTCGCACCGTGA
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Coding sequence (CDS) from alignment at tig00004414_pilon:227887..229365-

>Gchil1385.t1 ID=Gchil1385.t1|Name=Gchil1385.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1479bp|location=Sequence derived from alignment at tig00004414_pilon:227887..229365- (Gracilaria chilensis NLEC103_M9 male)
ATGACTATCGAAACGAGCCTGCCAGTACCGGTCTTCAACGTTATCAAGTA
CCTTCTTCTAACTTTCTCTATCGATGTTTTGGTTCGCGGTGGTCTGGACA
GCTTCGAACACTTTCGACGCCGTCTCTTTCTTTATTACGGCCTATCTGTT
GATTTCGGAAACCGTCGGATAGATCGCTACAACCTAATTCACCGCTTTCG
CACTCGAAACATTGGCCCACCAGTTCTACTCACACTGCTAACGGTGGCTG
CGTACGCAGTCGAGATCAGTCTTGAATTCTCATCTGACTCTCGTATGGGT
CGTATTCCAATCGCCGGAAAGGTAACGCGCTTGAATTTTACGCGCGGAAT
ATGCTCTCTAGACAGTATCATCTATCGTACCAATGCCAACCGATTTGCTC
GACTTGCAGAAGAATGCATAATTCACGAAAATGGCATCTACAGACTGTAT
CGCCCAATATGGACCACTAGTCCAGAGGATTCGTTCAGACCTTTATGCGA
GCCCACTTTGTCAAACCTAGTCTACGAAACCACCGATGTTTATGAGACTC
TGCAAGGAAAAGGTAAAAAAGCTCAACAAGAGAATGAACAGCTCAGTCAC
ACAATGCGCGCACATTCCTATAAGTCCAATGGTGATGAAGAGCGCTCATT
CGTAACAATGCGCATTACATCGAAGGATATAGTCGGCAGTTTTCCCTATT
CTTTCGCTTCTGATGATTTCACGTCCTCCGTTTTTATTAAGCGTCTGGGT
GACTCGAAAGTGAAGTGCTTTGGAACTGTCTATGGCCGACACGGCGAAGG
AATGATGAGAGTAATGATGCTTGGCTGCACAAATGGTTTCACCGAAAACA
GCACGCTTTCCTACGCACAAGGAACGGGTGTGGTGGAATTGGACGTCGAG
GACATTGAAAAGAATTGGATAGCTCTCATCGCTGTGGAAAGCCGTAGAAA
TGTGTATCGCTTTGCAAAAGGAGTCATCGACTACAACCCAGAGACGAACC
CTATAGCGTATGCTGCGTTTTTGGCGATATCGAGAGCGCAGGAAAAGATC
AATGTCAATAAGTATGCCATTGCATACCGCAACTGCGATAGGTTGTCCCT
CCCATCTCGAAATGCAGATACATGGGAGGAAACTGTGGAGGCCTCGAGCT
CTATCCCTCGAAATACAGCGACGATAGAACAATGGGCCATCATTCTTGTT
ATATGTTGGGTTGTATTCGTCACAGCTTTCAGATTTGCTTTACATTTGTT
GGCAGATCGCAAAGGAATGCCGAAGCGGTTGTATGGTGAGAAAGATATTG
TCAGCCTTTGGACCTATGAAAAGGAGAGAGAATCGCTGGCTGAGTGCAGA
GATGGGTGCCCAAAAAGAAGCAAGAACGGATATTTATCTGTTCATATTGG
AAGTGTATGTGACTACATAACCGCAACAAAAAATGAGGGGAATATCCTTC
GTGACCGGCGAAAAAGTTTCGCACCGTGA
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