Gchil1371.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil1371.t1
Unique NameGchil1371.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length590
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004414_piloncontigtig00004414_pilon:10931..12700 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1371Gchil1371Gracilaria chilensis NLEC103_M9 malegenetig00004414_pilon 10931..12700 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1371.t1.stop1Gchil1371.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004414_pilon 10931..10933 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1371.t1.CDS1Gchil1371.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004414_pilon 10931..12700 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1371.t1.exon1Gchil1371.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004414_pilon 10931..12700 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1371.t1.start1Gchil1371.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004414_pilon 12698..12700 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1371.t1Gchil1371.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004414_pilon 10931..12700 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil1371.t1 ID=Gchil1371.t1|Name=Gchil1371.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=590bp
MVVFVGTTDRPVVVLPEEKILDVVEGYQAKNWLSRAWKACYEGLRRGSGF
GMGILKLSFKELCSMSRYSEMSEKDEDMRTFLSTTQCPLVMKDKYIGLGL
NSEVYRIGNRSKPNIIFESMLVAHQHVLCVVLERGLSEEIYGCVNDRSPK
VEDMAFVSSVHCRFGIRIPKAGGLCNFIRIVEQGSADVDVEKRQSMLLSK
PRVSGKGRKSVWDGWIPNPKSSAEENQYGSYVVYTLLPCLEGAVTEDLVQ
NGGVYLTITERIVRAYTTLRANKALFYEYVAPLNPMDTTAVRTVFLTFGC
SIVLPCTYAVRIGGHEMLSVQIVGYVVRVERMEKEEYSFYDKVRIRAAEN
LYECCSDVGYLERNEDGTESKVEFDILRDNRSRKYVVGSIPTMLNIEINN
KFRESLVQKMYDVLPGATNLCEVYNLNPILRVDGEGSISMKKNVEDLRLE
GHMMMALDGKEQWVVKDVPYKRYEVLLKRGMCFPFNIADIREEENARNLQ
RGESRKIEETQGVNSAQSRSNDGSNNEARSSSSAVKRTESIGEPTIAQPD
PSLSTESNKNDIKVDRKNLATRLRMRKRRRVKVMSDEDE*
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spliced messenger RNA

>Gchil1371.t1 ID=Gchil1371.t1|Name=Gchil1371.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1770bp|location=Sequence derived from alignment at tig00004414_pilon:10931..12700- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTCGTCTTTGTTGGAACTACAGATCGCCCAGTTGTAGTACTGCCTGA
AGAAAAGATTCTGGATGTCGTGGAGGGCTACCAAGCTAAGAATTGGTTGA
GTAGAGCATGGAAAGCATGTTATGAAGGGCTACGTCGAGGAAGTGGTTTT
GGAATGGGAATATTGAAATTGTCGTTCAAAGAACTTTGCAGCATGTCTCG
CTATTCCGAAATGAGTGAAAAGGATGAGGACATGCGGACCTTTTTGAGCA
CAACGCAGTGTCCCCTGGTAATGAAGGACAAGTACATTGGGCTTGGCTTA
AATTCAGAAGTTTACCGAATAGGTAATCGATCGAAACCGAACATTATCTT
TGAGTCAATGTTGGTGGCACACCAGCACGTCCTTTGTGTAGTACTTGAAA
GGGGATTGAGCGAAGAAATATATGGTTGTGTCAACGACCGATCTCCGAAA
GTGGAAGACATGGCATTTGTCAGCAGCGTTCACTGCAGATTTGGAATCCG
TATACCAAAGGCTGGTGGTTTGTGCAATTTTATCCGGATTGTCGAACAGG
GTTCAGCTGACGTAGATGTCGAGAAAAGACAGAGCATGCTACTTTCGAAA
CCACGAGTCTCAGGAAAGGGGCGTAAGTCTGTTTGGGACGGGTGGATTCC
AAACCCAAAGTCTTCAGCGGAGGAGAATCAGTATGGATCTTATGTCGTAT
ATACTTTGTTACCATGTTTGGAAGGTGCTGTTACTGAAGACCTAGTGCAA
AACGGCGGTGTATACCTGACTATAACAGAAAGAATTGTAAGGGCGTATAC
TACATTGAGAGCAAACAAAGCTCTTTTTTATGAATACGTTGCGCCGCTGA
ATCCGATGGATACTACAGCTGTGCGAACTGTGTTTCTCACGTTCGGGTGC
AGTATTGTGTTACCGTGTACATACGCGGTGCGTATCGGTGGACATGAAAT
GCTATCCGTGCAGATAGTAGGATATGTGGTGAGGGTTGAACGAATGGAAA
AGGAGGAGTATAGTTTTTACGACAAGGTGCGCATAAGAGCGGCAGAAAAT
CTTTACGAATGCTGCAGCGATGTCGGATATCTGGAGAGAAACGAAGATGG
GACGGAGAGCAAGGTTGAGTTTGATATCTTGAGGGACAATAGAAGTCGGA
AATATGTTGTCGGGAGTATTCCGACGATGCTAAATATTGAGATCAACAAC
AAGTTTCGAGAGTCACTGGTGCAAAAGATGTATGACGTACTTCCAGGCGC
GACAAATCTCTGCGAGGTGTACAATTTGAATCCCATATTACGAGTAGACG
GTGAAGGATCGATTAGCATGAAGAAGAATGTGGAGGATCTTAGGTTGGAA
GGGCATATGATGATGGCCCTGGATGGGAAAGAACAATGGGTCGTGAAGGA
CGTTCCATATAAACGTTATGAAGTACTTCTGAAGAGGGGAATGTGCTTTC
CATTTAACATTGCAGACATTCGCGAAGAAGAAAACGCACGGAATTTACAG
CGGGGTGAATCTAGGAAAATAGAAGAAACGCAGGGAGTGAACAGCGCGCA
GTCGAGGTCGAATGACGGAAGCAATAATGAGGCGAGATCAAGTAGTAGCG
CTGTGAAGAGAACGGAATCAATAGGAGAACCTACGATTGCGCAACCCGAC
CCATCTTTGAGCACGGAAAGTAACAAGAACGACATTAAAGTCGACAGGAA
GAATCTAGCCACGAGATTGAGAATGAGAAAACGTCGTCGAGTAAAAGTGA
TGTCCGATGAGGACGAGTGA
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protein sequence of Gchil1371.t1

>Gchil1371.t1 ID=Gchil1371.t1|Name=Gchil1371.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=590bp
MVVFVGTTDRPVVVLPEEKILDVVEGYQAKNWLSRAWKACYEGLRRGSGF
GMGILKLSFKELCSMSRYSEMSEKDEDMRTFLSTTQCPLVMKDKYIGLGL
NSEVYRIGNRSKPNIIFESMLVAHQHVLCVVLERGLSEEIYGCVNDRSPK
VEDMAFVSSVHCRFGIRIPKAGGLCNFIRIVEQGSADVDVEKRQSMLLSK
PRVSGKGRKSVWDGWIPNPKSSAEENQYGSYVVYTLLPCLEGAVTEDLVQ
NGGVYLTITERIVRAYTTLRANKALFYEYVAPLNPMDTTAVRTVFLTFGC
SIVLPCTYAVRIGGHEMLSVQIVGYVVRVERMEKEEYSFYDKVRIRAAEN
LYECCSDVGYLERNEDGTESKVEFDILRDNRSRKYVVGSIPTMLNIEINN
KFRESLVQKMYDVLPGATNLCEVYNLNPILRVDGEGSISMKKNVEDLRLE
GHMMMALDGKEQWVVKDVPYKRYEVLLKRGMCFPFNIADIREEENARNLQ
RGESRKIEETQGVNSAQSRSNDGSNNEARSSSSAVKRTESIGEPTIAQPD
PSLSTESNKNDIKVDRKNLATRLRMRKRRRVKVMSDEDE*
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mRNA from alignment at tig00004414_pilon:10931..12700-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil1371.t1 ID=Gchil1371.t1|Name=Gchil1371.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1770bp|location=Sequence derived from alignment at tig00004414_pilon:10931..12700- (Gracilaria chilensis NLEC103_M9 male)
ATGGTCGTCTTTGTTGGAACTACAGATCGCCCAGTTGTAGTACTGCCTGA
AGAAAAGATTCTGGATGTCGTGGAGGGCTACCAAGCTAAGAATTGGTTGA
GTAGAGCATGGAAAGCATGTTATGAAGGGCTACGTCGAGGAAGTGGTTTT
GGAATGGGAATATTGAAATTGTCGTTCAAAGAACTTTGCAGCATGTCTCG
CTATTCCGAAATGAGTGAAAAGGATGAGGACATGCGGACCTTTTTGAGCA
CAACGCAGTGTCCCCTGGTAATGAAGGACAAGTACATTGGGCTTGGCTTA
AATTCAGAAGTTTACCGAATAGGTAATCGATCGAAACCGAACATTATCTT
TGAGTCAATGTTGGTGGCACACCAGCACGTCCTTTGTGTAGTACTTGAAA
GGGGATTGAGCGAAGAAATATATGGTTGTGTCAACGACCGATCTCCGAAA
GTGGAAGACATGGCATTTGTCAGCAGCGTTCACTGCAGATTTGGAATCCG
TATACCAAAGGCTGGTGGTTTGTGCAATTTTATCCGGATTGTCGAACAGG
GTTCAGCTGACGTAGATGTCGAGAAAAGACAGAGCATGCTACTTTCGAAA
CCACGAGTCTCAGGAAAGGGGCGTAAGTCTGTTTGGGACGGGTGGATTCC
AAACCCAAAGTCTTCAGCGGAGGAGAATCAGTATGGATCTTATGTCGTAT
ATACTTTGTTACCATGTTTGGAAGGTGCTGTTACTGAAGACCTAGTGCAA
AACGGCGGTGTATACCTGACTATAACAGAAAGAATTGTAAGGGCGTATAC
TACATTGAGAGCAAACAAAGCTCTTTTTTATGAATACGTTGCGCCGCTGA
ATCCGATGGATACTACAGCTGTGCGAACTGTGTTTCTCACGTTCGGGTGC
AGTATTGTGTTACCGTGTACATACGCGGTGCGTATCGGTGGACATGAAAT
GCTATCCGTGCAGATAGTAGGATATGTGGTGAGGGTTGAACGAATGGAAA
AGGAGGAGTATAGTTTTTACGACAAGGTGCGCATAAGAGCGGCAGAAAAT
CTTTACGAATGCTGCAGCGATGTCGGATATCTGGAGAGAAACGAAGATGG
GACGGAGAGCAAGGTTGAGTTTGATATCTTGAGGGACAATAGAAGTCGGA
AATATGTTGTCGGGAGTATTCCGACGATGCTAAATATTGAGATCAACAAC
AAGTTTCGAGAGTCACTGGTGCAAAAGATGTATGACGTACTTCCAGGCGC
GACAAATCTCTGCGAGGTGTACAATTTGAATCCCATATTACGAGTAGACG
GTGAAGGATCGATTAGCATGAAGAAGAATGTGGAGGATCTTAGGTTGGAA
GGGCATATGATGATGGCCCTGGATGGGAAAGAACAATGGGTCGTGAAGGA
CGTTCCATATAAACGTTATGAAGTACTTCTGAAGAGGGGAATGTGCTTTC
CATTTAACATTGCAGACATTCGCGAAGAAGAAAACGCACGGAATTTACAG
CGGGGTGAATCTAGGAAAATAGAAGAAACGCAGGGAGTGAACAGCGCGCA
GTCGAGGTCGAATGACGGAAGCAATAATGAGGCGAGATCAAGTAGTAGCG
CTGTGAAGAGAACGGAATCAATAGGAGAACCTACGATTGCGCAACCCGAC
CCATCTTTGAGCACGGAAAGTAACAAGAACGACATTAAAGTCGACAGGAA
GAATCTAGCCACGAGATTGAGAATGAGAAAACGTCGTCGAGTAAAAGTGA
TGTCCGATGAGGACGAGTGA
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Coding sequence (CDS) from alignment at tig00004414_pilon:10931..12700-

>Gchil1371.t1 ID=Gchil1371.t1|Name=Gchil1371.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1770bp|location=Sequence derived from alignment at tig00004414_pilon:10931..12700- (Gracilaria chilensis NLEC103_M9 male)
ATGGTCGTCTTTGTTGGAACTACAGATCGCCCAGTTGTAGTACTGCCTGA
AGAAAAGATTCTGGATGTCGTGGAGGGCTACCAAGCTAAGAATTGGTTGA
GTAGAGCATGGAAAGCATGTTATGAAGGGCTACGTCGAGGAAGTGGTTTT
GGAATGGGAATATTGAAATTGTCGTTCAAAGAACTTTGCAGCATGTCTCG
CTATTCCGAAATGAGTGAAAAGGATGAGGACATGCGGACCTTTTTGAGCA
CAACGCAGTGTCCCCTGGTAATGAAGGACAAGTACATTGGGCTTGGCTTA
AATTCAGAAGTTTACCGAATAGGTAATCGATCGAAACCGAACATTATCTT
TGAGTCAATGTTGGTGGCACACCAGCACGTCCTTTGTGTAGTACTTGAAA
GGGGATTGAGCGAAGAAATATATGGTTGTGTCAACGACCGATCTCCGAAA
GTGGAAGACATGGCATTTGTCAGCAGCGTTCACTGCAGATTTGGAATCCG
TATACCAAAGGCTGGTGGTTTGTGCAATTTTATCCGGATTGTCGAACAGG
GTTCAGCTGACGTAGATGTCGAGAAAAGACAGAGCATGCTACTTTCGAAA
CCACGAGTCTCAGGAAAGGGGCGTAAGTCTGTTTGGGACGGGTGGATTCC
AAACCCAAAGTCTTCAGCGGAGGAGAATCAGTATGGATCTTATGTCGTAT
ATACTTTGTTACCATGTTTGGAAGGTGCTGTTACTGAAGACCTAGTGCAA
AACGGCGGTGTATACCTGACTATAACAGAAAGAATTGTAAGGGCGTATAC
TACATTGAGAGCAAACAAAGCTCTTTTTTATGAATACGTTGCGCCGCTGA
ATCCGATGGATACTACAGCTGTGCGAACTGTGTTTCTCACGTTCGGGTGC
AGTATTGTGTTACCGTGTACATACGCGGTGCGTATCGGTGGACATGAAAT
GCTATCCGTGCAGATAGTAGGATATGTGGTGAGGGTTGAACGAATGGAAA
AGGAGGAGTATAGTTTTTACGACAAGGTGCGCATAAGAGCGGCAGAAAAT
CTTTACGAATGCTGCAGCGATGTCGGATATCTGGAGAGAAACGAAGATGG
GACGGAGAGCAAGGTTGAGTTTGATATCTTGAGGGACAATAGAAGTCGGA
AATATGTTGTCGGGAGTATTCCGACGATGCTAAATATTGAGATCAACAAC
AAGTTTCGAGAGTCACTGGTGCAAAAGATGTATGACGTACTTCCAGGCGC
GACAAATCTCTGCGAGGTGTACAATTTGAATCCCATATTACGAGTAGACG
GTGAAGGATCGATTAGCATGAAGAAGAATGTGGAGGATCTTAGGTTGGAA
GGGCATATGATGATGGCCCTGGATGGGAAAGAACAATGGGTCGTGAAGGA
CGTTCCATATAAACGTTATGAAGTACTTCTGAAGAGGGGAATGTGCTTTC
CATTTAACATTGCAGACATTCGCGAAGAAGAAAACGCACGGAATTTACAG
CGGGGTGAATCTAGGAAAATAGAAGAAACGCAGGGAGTGAACAGCGCGCA
GTCGAGGTCGAATGACGGAAGCAATAATGAGGCGAGATCAAGTAGTAGCG
CTGTGAAGAGAACGGAATCAATAGGAGAACCTACGATTGCGCAACCCGAC
CCATCTTTGAGCACGGAAAGTAACAAGAACGACATTAAAGTCGACAGGAA
GAATCTAGCCACGAGATTGAGAATGAGAAAACGTCGTCGAGTAAAAGTGA
TGTCCGATGAGGACGAGTGA
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