Gchil1313.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil1313.t1
Unique NameGchil1313.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length782
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004433_piloncontigtig00004433_pilon:254905..257250 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1313Gchil1313Gracilaria chilensis NLEC103_M9 malegenetig00004433_pilon 254905..257250 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1313.t1.stop1Gchil1313.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004433_pilon 254905..254907 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1313.t1.CDS1Gchil1313.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004433_pilon 254905..257250 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1313.t1.exon1Gchil1313.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004433_pilon 254905..257250 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1313.t1.start1Gchil1313.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004433_pilon 257248..257250 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil1313.t1Gchil1313.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004433_pilon 254905..257250 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil1313.t1 ID=Gchil1313.t1|Name=Gchil1313.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=782bp
MPERNYRGERSREYDSEDRRRRARRRDDSPSERGGYYPRNRDNRDIYERN
RDDRRGYSRYNEGRHRYDRRNDNRLHYDRDHNHRHEPDSRTDFDLHPNSD
AHHGEEVEATGSSEMRMRRRREDNDNNNSQSTNRNELKREHSEDGESEHS
KRRRSSGDVRPFSRRNDGDNGLETNVRHRKNKSYYYESGTAHNYDHYSHE
DIERSVPSNRRYSRHGEEDRSDYDHGQGRAYGRRSRQDYESGEDEERITR
PSKRRVSDASPPLEDQSRHYRRSMASPRDENPGENPSRAPQREGQSVLGC
KNTSDDVVERESVVQRDKNEPDDYAAQVAEFNKNRNSRPMRIRDASHLDV
EGREHSDRARGEPRQGFSSHERGDLLRVEYRNGFCPRGRGEPRHGLGARG
RGETSRDGPHQNFGYRERDERRYGGGRPPFHSQFDRRQKDRFDNPRPNRG
RSFGGASRGGFQGNPYECDEPTVVKEIPFDENIVYDQNIFRFGYVIHVEE
TWTESAPSDDIPEVYKLIEADMRRNGEYVGGDETMKEREASRRGEEKFDM
NGEGKTSEGNGDTLETNQISSGIGKKTSNEGTDKKIKSTADHLSTGKAPK
GDDPPKTNAQEDFNKNAEMETELKHDEVKVGNGNHHKDRKAPESGAGSRA
DISMDIVESEDLNGNGGEDKNVSENRDLPTNGNWDENQRENGGRKGNENM
DEDIPCDGKHRAPMEVEDLSGTDEKKNLDKKDDSSSGCASVGNPNPTDAG
RAQRENKARDADAANNDSSPVNVIVEKKEKK*
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spliced messenger RNA

>Gchil1313.t1 ID=Gchil1313.t1|Name=Gchil1313.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2346bp|location=Sequence derived from alignment at tig00004433_pilon:254905..257250- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTGAAAGAAACTACCGCGGGGAACGAAGTCGAGAGTACGATTCAGA
AGATCGCCGTCGCCGGGCTAGAAGGCGAGATGACTCGCCATCTGAACGAG
GAGGCTATTACCCCCGGAACAGGGACAACCGAGATATATATGAACGGAAT
AGAGACGACCGCCGAGGATACAGCCGATACAATGAAGGGCGCCATAGATA
TGATAGGCGCAACGATAACCGTCTCCATTATGATCGAGACCACAACCATC
GCCACGAACCAGACTCACGTACAGATTTCGATCTTCATCCTAACAGTGAT
GCGCACCATGGAGAAGAAGTAGAAGCAACCGGATCGTCAGAAATGCGAAT
GAGGCGTAGACGTGAAGATAACGATAACAACAATTCTCAATCGACAAATC
GAAATGAGCTGAAAAGGGAACATTCCGAAGATGGTGAGAGTGAGCACTCA
AAGCGAAGAAGGAGCAGTGGAGATGTACGGCCCTTTTCCCGTCGCAACGA
TGGGGATAATGGTTTGGAAACAAACGTTCGGCACCGCAAAAACAAAAGCT
ATTACTACGAAAGTGGAACAGCCCATAACTACGACCACTATTCGCACGAA
GATATTGAAAGAAGTGTCCCTTCTAATCGAAGATATTCGCGCCACGGTGA
AGAAGATAGATCCGATTATGACCATGGCCAAGGTAGAGCTTATGGCCGAA
GGAGCAGGCAAGATTATGAAAGCGGAGAGGATGAAGAGCGAATCACAAGG
CCATCTAAACGTCGCGTGAGTGACGCCTCTCCACCTCTAGAAGACCAGTC
AAGACATTATCGAAGATCAATGGCATCTCCTAGAGATGAAAACCCAGGAG
AAAATCCAAGCAGGGCGCCGCAAAGGGAAGGACAGTCTGTTCTGGGATGT
AAAAATACATCCGACGATGTAGTTGAGAGGGAGAGCGTCGTGCAGCGCGA
CAAAAACGAACCAGACGACTACGCTGCACAGGTGGCGGAGTTCAACAAAA
ATCGCAACTCCCGCCCGATGCGCATTCGCGATGCTTCTCATCTTGATGTT
GAGGGCCGTGAACATTCTGATCGAGCACGTGGGGAACCTCGCCAAGGCTT
CTCATCTCATGAACGCGGTGATCTACTACGCGTTGAATACCGCAATGGTT
TTTGTCCTCGTGGGCGTGGTGAACCTCGTCATGGCCTTGGCGCTCGTGGA
CGTGGCGAGACATCACGTGACGGGCCTCATCAAAACTTCGGATATCGGGA
GCGTGATGAACGACGTTACGGAGGTGGTCGTCCACCGTTCCATTCTCAAT
TTGATCGACGTCAGAAAGATCGTTTTGATAACCCCCGTCCAAATAGGGGC
CGGTCTTTCGGGGGGGCGAGTAGAGGAGGATTTCAAGGAAACCCGTATGA
ATGTGATGAACCGACCGTTGTGAAAGAAATACCTTTTGATGAAAACATTG
TATATGACCAGAACATCTTCAGATTTGGCTATGTGATTCACGTAGAAGAA
ACTTGGACAGAGAGCGCCCCCAGCGATGATATTCCGGAGGTCTATAAACT
CATCGAAGCAGATATGAGGAGGAATGGTGAATATGTCGGTGGTGATGAAA
CCATGAAAGAGAGAGAAGCGTCGAGAAGAGGTGAAGAGAAATTCGATATG
AATGGAGAAGGTAAGACTTCGGAAGGAAATGGTGATACCCTTGAAACTAA
TCAAATTTCAAGCGGGATTGGCAAAAAGACGTCTAATGAGGGTACAGACA
AGAAAATTAAGTCAACTGCTGACCATTTGAGTACCGGTAAAGCTCCGAAG
GGGGATGATCCTCCGAAAACGAATGCACAAGAGGATTTCAACAAGAACGC
AGAAATGGAAACTGAGCTCAAACATGATGAGGTGAAAGTTGGGAATGGGA
ACCACCATAAGGATAGGAAAGCCCCTGAAAGCGGAGCGGGCTCCAGAGCG
GACATCTCGATGGACATTGTTGAGAGCGAGGATCTGAACGGGAACGGAGG
CGAAGACAAAAATGTTTCTGAAAACAGGGATCTGCCTACGAACGGGAATT
GGGACGAGAATCAAAGGGAGAATGGTGGCAGGAAAGGGAATGAGAACATG
GATGAGGACATTCCGTGCGACGGAAAGCATCGTGCTCCAATGGAGGTGGA
AGATCTTTCTGGGACTGATGAAAAGAAAAACTTGGACAAGAAGGACGATA
GTAGTTCTGGATGTGCGTCTGTTGGAAATCCAAATCCGACGGATGCAGGG
CGGGCACAGCGAGAAAACAAAGCGAGGGATGCAGATGCAGCGAACAATGA
TAGTAGTCCGGTGAATGTCATTGTTGAAAAGAAGGAAAAGAAATGA
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protein sequence of Gchil1313.t1

>Gchil1313.t1 ID=Gchil1313.t1|Name=Gchil1313.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=782bp
MPERNYRGERSREYDSEDRRRRARRRDDSPSERGGYYPRNRDNRDIYERN
RDDRRGYSRYNEGRHRYDRRNDNRLHYDRDHNHRHEPDSRTDFDLHPNSD
AHHGEEVEATGSSEMRMRRRREDNDNNNSQSTNRNELKREHSEDGESEHS
KRRRSSGDVRPFSRRNDGDNGLETNVRHRKNKSYYYESGTAHNYDHYSHE
DIERSVPSNRRYSRHGEEDRSDYDHGQGRAYGRRSRQDYESGEDEERITR
PSKRRVSDASPPLEDQSRHYRRSMASPRDENPGENPSRAPQREGQSVLGC
KNTSDDVVERESVVQRDKNEPDDYAAQVAEFNKNRNSRPMRIRDASHLDV
EGREHSDRARGEPRQGFSSHERGDLLRVEYRNGFCPRGRGEPRHGLGARG
RGETSRDGPHQNFGYRERDERRYGGGRPPFHSQFDRRQKDRFDNPRPNRG
RSFGGASRGGFQGNPYECDEPTVVKEIPFDENIVYDQNIFRFGYVIHVEE
TWTESAPSDDIPEVYKLIEADMRRNGEYVGGDETMKEREASRRGEEKFDM
NGEGKTSEGNGDTLETNQISSGIGKKTSNEGTDKKIKSTADHLSTGKAPK
GDDPPKTNAQEDFNKNAEMETELKHDEVKVGNGNHHKDRKAPESGAGSRA
DISMDIVESEDLNGNGGEDKNVSENRDLPTNGNWDENQRENGGRKGNENM
DEDIPCDGKHRAPMEVEDLSGTDEKKNLDKKDDSSSGCASVGNPNPTDAG
RAQRENKARDADAANNDSSPVNVIVEKKEKK*
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mRNA from alignment at tig00004433_pilon:254905..257250-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil1313.t1 ID=Gchil1313.t1|Name=Gchil1313.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2346bp|location=Sequence derived from alignment at tig00004433_pilon:254905..257250- (Gracilaria chilensis NLEC103_M9 male)
ATGCCTGAAAGAAACTACCGCGGGGAACGAAGTCGAGAGTACGATTCAGA
AGATCGCCGTCGCCGGGCTAGAAGGCGAGATGACTCGCCATCTGAACGAG
GAGGCTATTACCCCCGGAACAGGGACAACCGAGATATATATGAACGGAAT
AGAGACGACCGCCGAGGATACAGCCGATACAATGAAGGGCGCCATAGATA
TGATAGGCGCAACGATAACCGTCTCCATTATGATCGAGACCACAACCATC
GCCACGAACCAGACTCACGTACAGATTTCGATCTTCATCCTAACAGTGAT
GCGCACCATGGAGAAGAAGTAGAAGCAACCGGATCGTCAGAAATGCGAAT
GAGGCGTAGACGTGAAGATAACGATAACAACAATTCTCAATCGACAAATC
GAAATGAGCTGAAAAGGGAACATTCCGAAGATGGTGAGAGTGAGCACTCA
AAGCGAAGAAGGAGCAGTGGAGATGTACGGCCCTTTTCCCGTCGCAACGA
TGGGGATAATGGTTTGGAAACAAACGTTCGGCACCGCAAAAACAAAAGCT
ATTACTACGAAAGTGGAACAGCCCATAACTACGACCACTATTCGCACGAA
GATATTGAAAGAAGTGTCCCTTCTAATCGAAGATATTCGCGCCACGGTGA
AGAAGATAGATCCGATTATGACCATGGCCAAGGTAGAGCTTATGGCCGAA
GGAGCAGGCAAGATTATGAAAGCGGAGAGGATGAAGAGCGAATCACAAGG
CCATCTAAACGTCGCGTGAGTGACGCCTCTCCACCTCTAGAAGACCAGTC
AAGACATTATCGAAGATCAATGGCATCTCCTAGAGATGAAAACCCAGGAG
AAAATCCAAGCAGGGCGCCGCAAAGGGAAGGACAGTCTGTTCTGGGATGT
AAAAATACATCCGACGATGTAGTTGAGAGGGAGAGCGTCGTGCAGCGCGA
CAAAAACGAACCAGACGACTACGCTGCACAGGTGGCGGAGTTCAACAAAA
ATCGCAACTCCCGCCCGATGCGCATTCGCGATGCTTCTCATCTTGATGTT
GAGGGCCGTGAACATTCTGATCGAGCACGTGGGGAACCTCGCCAAGGCTT
CTCATCTCATGAACGCGGTGATCTACTACGCGTTGAATACCGCAATGGTT
TTTGTCCTCGTGGGCGTGGTGAACCTCGTCATGGCCTTGGCGCTCGTGGA
CGTGGCGAGACATCACGTGACGGGCCTCATCAAAACTTCGGATATCGGGA
GCGTGATGAACGACGTTACGGAGGTGGTCGTCCACCGTTCCATTCTCAAT
TTGATCGACGTCAGAAAGATCGTTTTGATAACCCCCGTCCAAATAGGGGC
CGGTCTTTCGGGGGGGCGAGTAGAGGAGGATTTCAAGGAAACCCGTATGA
ATGTGATGAACCGACCGTTGTGAAAGAAATACCTTTTGATGAAAACATTG
TATATGACCAGAACATCTTCAGATTTGGCTATGTGATTCACGTAGAAGAA
ACTTGGACAGAGAGCGCCCCCAGCGATGATATTCCGGAGGTCTATAAACT
CATCGAAGCAGATATGAGGAGGAATGGTGAATATGTCGGTGGTGATGAAA
CCATGAAAGAGAGAGAAGCGTCGAGAAGAGGTGAAGAGAAATTCGATATG
AATGGAGAAGGTAAGACTTCGGAAGGAAATGGTGATACCCTTGAAACTAA
TCAAATTTCAAGCGGGATTGGCAAAAAGACGTCTAATGAGGGTACAGACA
AGAAAATTAAGTCAACTGCTGACCATTTGAGTACCGGTAAAGCTCCGAAG
GGGGATGATCCTCCGAAAACGAATGCACAAGAGGATTTCAACAAGAACGC
AGAAATGGAAACTGAGCTCAAACATGATGAGGTGAAAGTTGGGAATGGGA
ACCACCATAAGGATAGGAAAGCCCCTGAAAGCGGAGCGGGCTCCAGAGCG
GACATCTCGATGGACATTGTTGAGAGCGAGGATCTGAACGGGAACGGAGG
CGAAGACAAAAATGTTTCTGAAAACAGGGATCTGCCTACGAACGGGAATT
GGGACGAGAATCAAAGGGAGAATGGTGGCAGGAAAGGGAATGAGAACATG
GATGAGGACATTCCGTGCGACGGAAAGCATCGTGCTCCAATGGAGGTGGA
AGATCTTTCTGGGACTGATGAAAAGAAAAACTTGGACAAGAAGGACGATA
GTAGTTCTGGATGTGCGTCTGTTGGAAATCCAAATCCGACGGATGCAGGG
CGGGCACAGCGAGAAAACAAAGCGAGGGATGCAGATGCAGCGAACAATGA
TAGTAGTCCGGTGAATGTCATTGTTGAAAAGAAGGAAAAGAAATGA
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Coding sequence (CDS) from alignment at tig00004433_pilon:254905..257250-

>Gchil1313.t1 ID=Gchil1313.t1|Name=Gchil1313.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2346bp|location=Sequence derived from alignment at tig00004433_pilon:254905..257250- (Gracilaria chilensis NLEC103_M9 male)
ATGCCTGAAAGAAACTACCGCGGGGAACGAAGTCGAGAGTACGATTCAGA
AGATCGCCGTCGCCGGGCTAGAAGGCGAGATGACTCGCCATCTGAACGAG
GAGGCTATTACCCCCGGAACAGGGACAACCGAGATATATATGAACGGAAT
AGAGACGACCGCCGAGGATACAGCCGATACAATGAAGGGCGCCATAGATA
TGATAGGCGCAACGATAACCGTCTCCATTATGATCGAGACCACAACCATC
GCCACGAACCAGACTCACGTACAGATTTCGATCTTCATCCTAACAGTGAT
GCGCACCATGGAGAAGAAGTAGAAGCAACCGGATCGTCAGAAATGCGAAT
GAGGCGTAGACGTGAAGATAACGATAACAACAATTCTCAATCGACAAATC
GAAATGAGCTGAAAAGGGAACATTCCGAAGATGGTGAGAGTGAGCACTCA
AAGCGAAGAAGGAGCAGTGGAGATGTACGGCCCTTTTCCCGTCGCAACGA
TGGGGATAATGGTTTGGAAACAAACGTTCGGCACCGCAAAAACAAAAGCT
ATTACTACGAAAGTGGAACAGCCCATAACTACGACCACTATTCGCACGAA
GATATTGAAAGAAGTGTCCCTTCTAATCGAAGATATTCGCGCCACGGTGA
AGAAGATAGATCCGATTATGACCATGGCCAAGGTAGAGCTTATGGCCGAA
GGAGCAGGCAAGATTATGAAAGCGGAGAGGATGAAGAGCGAATCACAAGG
CCATCTAAACGTCGCGTGAGTGACGCCTCTCCACCTCTAGAAGACCAGTC
AAGACATTATCGAAGATCAATGGCATCTCCTAGAGATGAAAACCCAGGAG
AAAATCCAAGCAGGGCGCCGCAAAGGGAAGGACAGTCTGTTCTGGGATGT
AAAAATACATCCGACGATGTAGTTGAGAGGGAGAGCGTCGTGCAGCGCGA
CAAAAACGAACCAGACGACTACGCTGCACAGGTGGCGGAGTTCAACAAAA
ATCGCAACTCCCGCCCGATGCGCATTCGCGATGCTTCTCATCTTGATGTT
GAGGGCCGTGAACATTCTGATCGAGCACGTGGGGAACCTCGCCAAGGCTT
CTCATCTCATGAACGCGGTGATCTACTACGCGTTGAATACCGCAATGGTT
TTTGTCCTCGTGGGCGTGGTGAACCTCGTCATGGCCTTGGCGCTCGTGGA
CGTGGCGAGACATCACGTGACGGGCCTCATCAAAACTTCGGATATCGGGA
GCGTGATGAACGACGTTACGGAGGTGGTCGTCCACCGTTCCATTCTCAAT
TTGATCGACGTCAGAAAGATCGTTTTGATAACCCCCGTCCAAATAGGGGC
CGGTCTTTCGGGGGGGCGAGTAGAGGAGGATTTCAAGGAAACCCGTATGA
ATGTGATGAACCGACCGTTGTGAAAGAAATACCTTTTGATGAAAACATTG
TATATGACCAGAACATCTTCAGATTTGGCTATGTGATTCACGTAGAAGAA
ACTTGGACAGAGAGCGCCCCCAGCGATGATATTCCGGAGGTCTATAAACT
CATCGAAGCAGATATGAGGAGGAATGGTGAATATGTCGGTGGTGATGAAA
CCATGAAAGAGAGAGAAGCGTCGAGAAGAGGTGAAGAGAAATTCGATATG
AATGGAGAAGGTAAGACTTCGGAAGGAAATGGTGATACCCTTGAAACTAA
TCAAATTTCAAGCGGGATTGGCAAAAAGACGTCTAATGAGGGTACAGACA
AGAAAATTAAGTCAACTGCTGACCATTTGAGTACCGGTAAAGCTCCGAAG
GGGGATGATCCTCCGAAAACGAATGCACAAGAGGATTTCAACAAGAACGC
AGAAATGGAAACTGAGCTCAAACATGATGAGGTGAAAGTTGGGAATGGGA
ACCACCATAAGGATAGGAAAGCCCCTGAAAGCGGAGCGGGCTCCAGAGCG
GACATCTCGATGGACATTGTTGAGAGCGAGGATCTGAACGGGAACGGAGG
CGAAGACAAAAATGTTTCTGAAAACAGGGATCTGCCTACGAACGGGAATT
GGGACGAGAATCAAAGGGAGAATGGTGGCAGGAAAGGGAATGAGAACATG
GATGAGGACATTCCGTGCGACGGAAAGCATCGTGCTCCAATGGAGGTGGA
AGATCTTTCTGGGACTGATGAAAAGAAAAACTTGGACAAGAAGGACGATA
GTAGTTCTGGATGTGCGTCTGTTGGAAATCCAAATCCGACGGATGCAGGG
CGGGCACAGCGAGAAAACAAAGCGAGGGATGCAGATGCAGCGAACAATGA
TAGTAGTCCGGTGAATGTCATTGTTGAAAAGAAGGAAAAGAAATGA
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