Gchil1238.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gchil1238.t1
Unique Name	Gchil1238.t1
Type	mRNA
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	645

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004437_pilon	contig	tig00004437_pilon:608671..610605 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	2880.D7G0K9
Preferred name	PHO89
PFAMs	PHO4
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K01280,ko:K03306,ko:K14640
KEGG TC	2.A.20,2.A.20.2
GOs	GO:0003674,GO:0005215,GO:0005315,GO:0005436,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006817,GO:0006820,GO:0008150,GO:0008324,GO:0012505,GO:0015075,GO:0015077,GO:0015081,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015319,GO:0015370,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0035725,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662
Evalue	3.98e-97
EggNOG OGs	COG0306@1\|root,KOG2493@2759\|Eukaryota
EC	3.4.14.10
Description	inorganic phosphate transmembrane transporter activity
COG category	U
BRITE	ko00000,ko01000,ko01002,ko02000,ko03110

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil1238	Gchil1238	Gracilaria chilensis NLEC103_M9 male	gene	tig00004437_pilon 608671..610605 -

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil1238.t1.stop1	Gchil1238.t1.stop1	Gracilaria chilensis NLEC103_M9 male	stop_codon	tig00004437_pilon 608671..608673 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil1238.t1.CDS1	Gchil1238.t1.CDS1	Gracilaria chilensis NLEC103_M9 male	CDS	tig00004437_pilon 608671..610605 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil1238.t1.exon1	Gchil1238.t1.exon1	Gracilaria chilensis NLEC103_M9 male	exon	tig00004437_pilon 608671..610605 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil1238.t1.start1	Gchil1238.t1.start1	Gracilaria chilensis NLEC103_M9 male	start_codon	tig00004437_pilon 610603..610605 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil1238.t1	Gchil1238.t1	Gracilaria chilensis NLEC103_M9 male	polypeptide	tig00004437_pilon 608671..610605 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00004437_pilon:608671..610605-
coding sequence from alignment at tig00004437_pilon:608671..610605-

mRNA sequence

>Gchil1238.t1 ID=Gchil1238.t1|Name=Gchil1238.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=645bp
MADGFNWPLLDMYKVADGVVIDSVQKYLWIVIVGGILAFLMAWGIGANDV
ANAFATSVGAGSLDLKWACVIAAVMEFLGALLLGGGVTDTVRKKIIKADV
FNPLDSGGTSNGPELLMTGFLVALITATTWLVAATYFSLPVSTTHSIIGS
LVGVGLAFRGGEAVVWISDGSGFGKLNGLVGVILSWIISPVLSAILAIIM
FLIVRTLVLRRKEPLKAGLLFMPLFYGITFSVTIFFIIFKGDKRFNISKK
LSLGAAIGIALGAGAVVAFVSFFTIVPLAKKYVNRWDARQKELAENPELA
VAEAEKKKKVEGALKKVGINLNVEEELDEDVIRMHDNVEKFDPKTERLFS
WVQVFTAAFDALAHGSNDVANAIAPFASIYQLYKNNGIISKVNKNEFEKD
GVYSGGKLDGKEFEEEDGIPDFDAFCGKLGDDEFIACETTFPFLSGGASD
AKSAEFSRYDEDGKFVDNGTCYTACSPGAAASYASEKQSVPLWILALGGA
GIVAGLAMWGYRIIIAIGVKLTKLTPSRGFSIEIGAAITVLIASSVGIPV
STTHCQVGATVGVGLVEFKTSTVNWKQFFFICVGWVFTVLLTGLMSAAIY
AVLIYTPQAFTRGDGPLSYCPGEELFQFNSEAQAFEGIACSGRL*

spliced messenger RNA

>Gchil1238.t1 ID=Gchil1238.t1|Name=Gchil1238.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1935bp|location=Sequence derived from alignment at tig00004437_pilon:608671..610605- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTGACGGTTTCAACTGGCCTCTGCTCGATATGTACAAGGTCGCTGA
TGGTGTTGTTATTGACTCCGTCCAAAAGTACCTATGGATTGTGATCGTTG
GTGGCATTCTCGCCTTTTTAATGGCCTGGGGCATTGGTGCAAATGATGTA
GCCAATGCCTTCGCTACCTCTGTCGGTGCCGGTTCTTTGGACCTGAAGTG
GGCTTGCGTTATTGCCGCCGTGATGGAATTCCTTGGTGCTCTTTTGCTCG
GTGGCGGTGTCACTGATACCGTCCGCAAGAAGATTATCAAGGCTGATGTT
TTCAACCCTCTCGACTCTGGCGGTACTTCCAACGGCCCGGAGCTTCTCAT
GACTGGTTTCCTGGTTGCCCTCATCACTGCCACGACCTGGTTGGTTGCCG
CCACCTACTTTTCTCTCCCGGTCTCCACCACCCATTCCATAATTGGCTCC
CTCGTTGGAGTTGGTCTCGCTTTCCGTGGTGGCGAGGCTGTCGTCTGGAT
CTCAGACGGTTCTGGCTTCGGCAAGCTCAATGGTCTCGTTGGTGTCATCC
TCTCCTGGATCATCTCCCCTGTGCTTTCAGCCATTCTCGCTATCATCATG
TTCTTGATCGTCCGTACCCTTGTCCTCCGCCGCAAGGAGCCCCTCAAGGC
CGGTCTCCTGTTCATGCCGCTCTTCTACGGTATTACCTTCTCCGTCACAA
TTTTCTTCATCATCTTCAAGGGTGACAAGCGTTTCAATATCAGCAAGAAG
CTTTCTCTCGGAGCGGCGATCGGAATCGCTCTCGGTGCTGGTGCCGTTGT
TGCCTTCGTCTCCTTCTTCACCATTGTTCCGCTTGCCAAGAAATACGTTA
ACAGATGGGATGCACGCCAAAAGGAGCTCGCTGAGAACCCTGAGCTCGCC
GTTGCTGAAGCCGAGAAGAAAAAAAAGGTGGAAGGTGCCCTCAAGAAGGT
CGGTATCAACCTTAACGTCGAAGAGGAGCTTGACGAGGACGTCATTCGCA
TGCACGACAATGTCGAGAAATTTGACCCGAAGACCGAGCGTCTTTTCTCC
TGGGTCCAGGTCTTTACCGCCGCTTTCGATGCCCTCGCCCATGGTAGCAA
TGACGTTGCCAACGCCATTGCTCCATTTGCTTCCATCTACCAGTTGTATA
AGAATAACGGTATCATTTCCAAGGTTAACAAGAACGAGTTTGAGAAGGAC
GGTGTCTACTCCGGTGGGAAACTTGACGGGAAGGAGTTCGAAGAGGAAGA
CGGTATTCCGGACTTTGACGCCTTCTGTGGCAAGCTTGGTGATGATGAGT
TCATCGCTTGCGAAACCACCTTCCCGTTCTTGTCAGGCGGAGCCTCTGAT
GCCAAGTCCGCTGAGTTCTCTAGGTACGATGAGGATGGCAAATTCGTTGA
CAACGGCACTTGCTACACCGCCTGCAGTCCGGGTGCCGCTGCCAGTTACG
CGTCCGAGAAACAGAGCGTGCCGCTTTGGATTCTCGCTCTCGGTGGTGCT
GGTATCGTTGCCGGTCTCGCCATGTGGGGTTATCGTATCATTATCGCCAT
TGGTGTGAAGCTCACCAAGCTCACGCCGTCGCGTGGTTTCTCTATTGAGA
TCGGTGCCGCCATCACAGTGCTCATCGCCTCCAGCGTTGGTATCCCAGTT
TCTACCACTCATTGCCAGGTCGGTGCCACCGTGGGTGTCGGTCTTGTTGA
GTTCAAGACTTCCACCGTCAACTGGAAGCAGTTCTTCTTCATTTGCGTTG
GATGGGTGTTCACTGTGCTCCTCACCGGACTCATGTCCGCCGCCATCTAT
GCCGTCCTCATCTACACGCCACAAGCCTTCACCCGTGGTGATGGCCCCCT
TAGCTATTGCCCGGGTGAGGAACTGTTTCAGTTCAACTCCGAGGCTCAGG
CCTTCGAAGGTATTGCCTGCTCTGGTCGTCTGTAA

protein sequence of Gchil1238.t1

>Gchil1238.t1 ID=Gchil1238.t1|Name=Gchil1238.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=645bp
MADGFNWPLLDMYKVADGVVIDSVQKYLWIVIVGGILAFLMAWGIGANDV
ANAFATSVGAGSLDLKWACVIAAVMEFLGALLLGGGVTDTVRKKIIKADV
FNPLDSGGTSNGPELLMTGFLVALITATTWLVAATYFSLPVSTTHSIIGS
LVGVGLAFRGGEAVVWISDGSGFGKLNGLVGVILSWIISPVLSAILAIIM
FLIVRTLVLRRKEPLKAGLLFMPLFYGITFSVTIFFIIFKGDKRFNISKK
LSLGAAIGIALGAGAVVAFVSFFTIVPLAKKYVNRWDARQKELAENPELA
VAEAEKKKKVEGALKKVGINLNVEEELDEDVIRMHDNVEKFDPKTERLFS
WVQVFTAAFDALAHGSNDVANAIAPFASIYQLYKNNGIISKVNKNEFEKD
GVYSGGKLDGKEFEEEDGIPDFDAFCGKLGDDEFIACETTFPFLSGGASD
AKSAEFSRYDEDGKFVDNGTCYTACSPGAAASYASEKQSVPLWILALGGA
GIVAGLAMWGYRIIIAIGVKLTKLTPSRGFSIEIGAAITVLIASSVGIPV
STTHCQVGATVGVGLVEFKTSTVNWKQFFFICVGWVFTVLLTGLMSAAIY
AVLIYTPQAFTRGDGPLSYCPGEELFQFNSEAQAFEGIACSGRL*

mRNA from alignment at tig00004437_pilon:608671..610605-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gchil1238.t1 ID=Gchil1238.t1|Name=Gchil1238.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1935bp|location=Sequence derived from alignment at tig00004437_pilon:608671..610605- (Gracilaria chilensis NLEC103_M9 male)
ATGGCTGACGGTTTCAACTGGCCTCTGCTCGATATGTACAAGGTCGCTGA
TGGTGTTGTTATTGACTCCGTCCAAAAGTACCTATGGATTGTGATCGTTG
GTGGCATTCTCGCCTTTTTAATGGCCTGGGGCATTGGTGCAAATGATGTA
GCCAATGCCTTCGCTACCTCTGTCGGTGCCGGTTCTTTGGACCTGAAGTG
GGCTTGCGTTATTGCCGCCGTGATGGAATTCCTTGGTGCTCTTTTGCTCG
GTGGCGGTGTCACTGATACCGTCCGCAAGAAGATTATCAAGGCTGATGTT
TTCAACCCTCTCGACTCTGGCGGTACTTCCAACGGCCCGGAGCTTCTCAT
GACTGGTTTCCTGGTTGCCCTCATCACTGCCACGACCTGGTTGGTTGCCG
CCACCTACTTTTCTCTCCCGGTCTCCACCACCCATTCCATAATTGGCTCC
CTCGTTGGAGTTGGTCTCGCTTTCCGTGGTGGCGAGGCTGTCGTCTGGAT
CTCAGACGGTTCTGGCTTCGGCAAGCTCAATGGTCTCGTTGGTGTCATCC
TCTCCTGGATCATCTCCCCTGTGCTTTCAGCCATTCTCGCTATCATCATG
TTCTTGATCGTCCGTACCCTTGTCCTCCGCCGCAAGGAGCCCCTCAAGGC
CGGTCTCCTGTTCATGCCGCTCTTCTACGGTATTACCTTCTCCGTCACAA
TTTTCTTCATCATCTTCAAGGGTGACAAGCGTTTCAATATCAGCAAGAAG
CTTTCTCTCGGAGCGGCGATCGGAATCGCTCTCGGTGCTGGTGCCGTTGT
TGCCTTCGTCTCCTTCTTCACCATTGTTCCGCTTGCCAAGAAATACGTTA
ACAGATGGGATGCACGCCAAAAGGAGCTCGCTGAGAACCCTGAGCTCGCC
GTTGCTGAAGCCGAGAAGAAAAAAAAGGTGGAAGGTGCCCTCAAGAAGGT
CGGTATCAACCTTAACGTCGAAGAGGAGCTTGACGAGGACGTCATTCGCA
TGCACGACAATGTCGAGAAATTTGACCCGAAGACCGAGCGTCTTTTCTCC
TGGGTCCAGGTCTTTACCGCCGCTTTCGATGCCCTCGCCCATGGTAGCAA
TGACGTTGCCAACGCCATTGCTCCATTTGCTTCCATCTACCAGTTGTATA
AGAATAACGGTATCATTTCCAAGGTTAACAAGAACGAGTTTGAGAAGGAC
GGTGTCTACTCCGGTGGGAAACTTGACGGGAAGGAGTTCGAAGAGGAAGA
CGGTATTCCGGACTTTGACGCCTTCTGTGGCAAGCTTGGTGATGATGAGT
TCATCGCTTGCGAAACCACCTTCCCGTTCTTGTCAGGCGGAGCCTCTGAT
GCCAAGTCCGCTGAGTTCTCTAGGTACGATGAGGATGGCAAATTCGTTGA
CAACGGCACTTGCTACACCGCCTGCAGTCCGGGTGCCGCTGCCAGTTACG
CGTCCGAGAAACAGAGCGTGCCGCTTTGGATTCTCGCTCTCGGTGGTGCT
GGTATCGTTGCCGGTCTCGCCATGTGGGGTTATCGTATCATTATCGCCAT
TGGTGTGAAGCTCACCAAGCTCACGCCGTCGCGTGGTTTCTCTATTGAGA
TCGGTGCCGCCATCACAGTGCTCATCGCCTCCAGCGTTGGTATCCCAGTT
TCTACCACTCATTGCCAGGTCGGTGCCACCGTGGGTGTCGGTCTTGTTGA
GTTCAAGACTTCCACCGTCAACTGGAAGCAGTTCTTCTTCATTTGCGTTG
GATGGGTGTTCACTGTGCTCCTCACCGGACTCATGTCCGCCGCCATCTAT
GCCGTCCTCATCTACACGCCACAAGCCTTCACCCGTGGTGATGGCCCCCT
TAGCTATTGCCCGGGTGAGGAACTGTTTCAGTTCAACTCCGAGGCTCAGG
CCTTCGAAGGTATTGCCTGCTCTGGTCGTCTGTAA

Coding sequence (CDS) from alignment at tig00004437_pilon:608671..610605-

>Gchil1238.t1 ID=Gchil1238.t1|Name=Gchil1238.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1935bp|location=Sequence derived from alignment at tig00004437_pilon:608671..610605- (Gracilaria chilensis NLEC103_M9 male)
ATGGCTGACGGTTTCAACTGGCCTCTGCTCGATATGTACAAGGTCGCTGA
TGGTGTTGTTATTGACTCCGTCCAAAAGTACCTATGGATTGTGATCGTTG
GTGGCATTCTCGCCTTTTTAATGGCCTGGGGCATTGGTGCAAATGATGTA
GCCAATGCCTTCGCTACCTCTGTCGGTGCCGGTTCTTTGGACCTGAAGTG
GGCTTGCGTTATTGCCGCCGTGATGGAATTCCTTGGTGCTCTTTTGCTCG
GTGGCGGTGTCACTGATACCGTCCGCAAGAAGATTATCAAGGCTGATGTT
TTCAACCCTCTCGACTCTGGCGGTACTTCCAACGGCCCGGAGCTTCTCAT
GACTGGTTTCCTGGTTGCCCTCATCACTGCCACGACCTGGTTGGTTGCCG
CCACCTACTTTTCTCTCCCGGTCTCCACCACCCATTCCATAATTGGCTCC
CTCGTTGGAGTTGGTCTCGCTTTCCGTGGTGGCGAGGCTGTCGTCTGGAT
CTCAGACGGTTCTGGCTTCGGCAAGCTCAATGGTCTCGTTGGTGTCATCC
TCTCCTGGATCATCTCCCCTGTGCTTTCAGCCATTCTCGCTATCATCATG
TTCTTGATCGTCCGTACCCTTGTCCTCCGCCGCAAGGAGCCCCTCAAGGC
CGGTCTCCTGTTCATGCCGCTCTTCTACGGTATTACCTTCTCCGTCACAA
TTTTCTTCATCATCTTCAAGGGTGACAAGCGTTTCAATATCAGCAAGAAG
CTTTCTCTCGGAGCGGCGATCGGAATCGCTCTCGGTGCTGGTGCCGTTGT
TGCCTTCGTCTCCTTCTTCACCATTGTTCCGCTTGCCAAGAAATACGTTA
ACAGATGGGATGCACGCCAAAAGGAGCTCGCTGAGAACCCTGAGCTCGCC
GTTGCTGAAGCCGAGAAGAAAAAAAAGGTGGAAGGTGCCCTCAAGAAGGT
CGGTATCAACCTTAACGTCGAAGAGGAGCTTGACGAGGACGTCATTCGCA
TGCACGACAATGTCGAGAAATTTGACCCGAAGACCGAGCGTCTTTTCTCC
TGGGTCCAGGTCTTTACCGCCGCTTTCGATGCCCTCGCCCATGGTAGCAA
TGACGTTGCCAACGCCATTGCTCCATTTGCTTCCATCTACCAGTTGTATA
AGAATAACGGTATCATTTCCAAGGTTAACAAGAACGAGTTTGAGAAGGAC
GGTGTCTACTCCGGTGGGAAACTTGACGGGAAGGAGTTCGAAGAGGAAGA
CGGTATTCCGGACTTTGACGCCTTCTGTGGCAAGCTTGGTGATGATGAGT
TCATCGCTTGCGAAACCACCTTCCCGTTCTTGTCAGGCGGAGCCTCTGAT
GCCAAGTCCGCTGAGTTCTCTAGGTACGATGAGGATGGCAAATTCGTTGA
CAACGGCACTTGCTACACCGCCTGCAGTCCGGGTGCCGCTGCCAGTTACG
CGTCCGAGAAACAGAGCGTGCCGCTTTGGATTCTCGCTCTCGGTGGTGCT
GGTATCGTTGCCGGTCTCGCCATGTGGGGTTATCGTATCATTATCGCCAT
TGGTGTGAAGCTCACCAAGCTCACGCCGTCGCGTGGTTTCTCTATTGAGA
TCGGTGCCGCCATCACAGTGCTCATCGCCTCCAGCGTTGGTATCCCAGTT
TCTACCACTCATTGCCAGGTCGGTGCCACCGTGGGTGTCGGTCTTGTTGA
GTTCAAGACTTCCACCGTCAACTGGAAGCAGTTCTTCTTCATTTGCGTTG
GATGGGTGTTCACTGTGCTCCTCACCGGACTCATGTCCGCCGCCATCTAT
GCCGTCCTCATCTACACGCCACAAGCCTTCACCCGTGGTGATGGCCCCCT
TAGCTATTGCCCGGGTGAGGAACTGTTTCAGTTCAACTCCGAGGCTCAGG
CCTTCGAAGGTATTGCCTGCTCTGGTCGTCTGTAA