Gchil10997.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil10997.t1
Unique NameGchil10997.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length456
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000021_piloncontigtig00000021_pilon:148342..149709 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog8128.ENSONIP00000000610
Preferred nameKLHL7
PFAMsBACK,BTB,Kelch_1
Max annot lvl33208|Metazoa
KEGG koko:K10445
GOsGO:0000151,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016567,GO:0019538,GO:0031461,GO:0031463,GO:0031974,GO:0031981,GO:0032446,GO:0032991,GO:0036211,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046983,GO:0048471,GO:0070013,GO:0070647,GO:0071704,GO:0071944,GO:1901564,GO:1902494,GO:1990234
Evalue5.83e-25
EggNOG OGsKOG4441@1|root,KOG4441@2759|Eukaryota,39PKU@33154|Opisthokonta,3BCH9@33208|Metazoa,3CZDA@33213|Bilateria,481J1@7711|Chordata,49038@7742|Vertebrata,49ZEE@7898|Actinopterygii
DescriptionKelch-like family member 7
COG categoryT
BRITEko00000,ko04121
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10997Gchil10997Gracilaria chilensis NLEC103_M9 malegenetig00000021_pilon 148342..149709 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10997.t1.start1Gchil10997.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000021_pilon 148342..148344 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10997.t1.CDS1Gchil10997.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000021_pilon 148342..149709 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10997.t1.exon1Gchil10997.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000021_pilon 148342..149709 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10997.t1.stop1Gchil10997.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000021_pilon 149707..149709 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10997.t1Gchil10997.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000021_pilon 148342..149709 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil10997.t1 ID=Gchil10997.t1|Name=Gchil10997.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=456bp
MRADCCTIGGHLDAPAHLRALLANMLQDPQLHSLCDVVLIVQDERFPAHR
AVLAAVSTVFKAMFTNSMRERSAPEIQLHSLDKRAWRMAMHYIYHAQLDI
HDEPTALLLLATARMYHLLPLERFVQNFLVSRVRLHNCFSLLHHAQHYNL
PALENACLRAMHANFEALSLSPAFLQCPYSLLSRLLVSGALVVKCETLVF
DAIQRWVQARRQQRIKHLPQLLCQLRLQSLSDAQLAVIVRAPLVADCLAF
RELVLQHLTRPRHDDVDQRALRAACHLKPCRRDANVFSFCHVQRAVTRMP
AADDEEIVRTPWALDRRSAILWRLKIYPRGYGKAKDLFLSMYVQARSASH
HQPLDLTARFDIFLVNRNDPTQTVSFSSSHHFTDLSDHWGFHRFLQLSQM
RNTALGFLDEQSDSLLLGATMYLPSTPADGDSDDPDPDPDNTCCTSSTPP
PQPST*
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spliced messenger RNA

>Gchil10997.t1 ID=Gchil10997.t1|Name=Gchil10997.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1368bp|location=Sequence derived from alignment at tig00000021_pilon:148342..149709+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCGCCGATTGTTGTACCATTGGCGGTCATCTCGACGCCCCCGCCCA
TCTCCGTGCCTTGCTTGCCAACATGTTGCAAGACCCCCAGCTCCATTCCC
TCTGCGACGTCGTGCTCATCGTTCAGGATGAACGCTTCCCCGCCCATCGT
GCCGTGCTCGCCGCCGTCTCCACCGTCTTCAAGGCCATGTTCACCAATTC
CATGCGCGAGCGCTCCGCCCCGGAAATACAGCTACACAGCCTGGACAAGC
GGGCGTGGCGCATGGCCATGCATTACATCTATCATGCCCAGCTCGACATT
CACGACGAGCCCACCGCCTTGTTACTGCTCGCCACCGCCCGTATGTACCA
TCTACTCCCGTTGGAACGTTTTGTTCAAAACTTTCTCGTGTCGCGCGTCC
GTCTTCACAACTGTTTCTCCTTGTTACACCATGCACAGCATTACAACTTG
CCTGCATTGGAGAACGCCTGTTTGCGTGCTATGCACGCCAACTTTGAGGC
ACTCTCGCTCTCGCCTGCCTTCTTGCAGTGTCCGTACTCGCTGCTGTCGC
GCCTGCTCGTCAGCGGCGCGCTCGTCGTCAAGTGTGAGACGCTTGTGTTC
GACGCCATACAACGCTGGGTACAAGCGCGCCGCCAACAGCGCATCAAGCA
TTTGCCACAATTGTTATGTCAGCTTCGTCTACAGTCGCTATCCGATGCAC
AATTGGCCGTCATTGTGCGCGCCCCGCTCGTCGCTGACTGTCTCGCCTTT
CGTGAACTTGTCTTGCAACATCTCACACGTCCGCGCCACGATGACGTCGA
TCAACGCGCTTTGCGCGCCGCTTGTCATCTCAAACCATGCCGACGCGATG
CAAACGTCTTCTCCTTCTGTCATGTGCAACGCGCCGTTACGCGCATGCCC
GCCGCCGATGATGAGGAAATTGTGCGTACACCCTGGGCTCTCGATCGTCG
CAGCGCCATCTTGTGGCGTCTCAAGATTTACCCCAGGGGTTACGGTAAGG
CCAAGGACTTGTTTCTGTCCATGTACGTGCAGGCACGTAGCGCGTCGCAC
CACCAACCGCTTGATCTTACTGCGCGCTTCGATATCTTTTTGGTCAATCG
CAACGACCCTACGCAGACGGTGTCCTTCTCGTCGTCGCACCATTTTACCG
ACCTTAGTGACCACTGGGGCTTTCATCGATTCTTGCAGCTGTCTCAGATG
AGAAACACTGCGCTGGGCTTTCTGGACGAGCAGAGCGACTCGTTGCTGCT
GGGCGCCACGATGTACTTGccgagcacgcccgccgacggcgacagcgacg
accccgaccccgaccccgacAACACATGCTGCACCTCTTCCACCCCACCG
CCACAGCCGTCCACATGA
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protein sequence of Gchil10997.t1

>Gchil10997.t1 ID=Gchil10997.t1|Name=Gchil10997.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=456bp
MRADCCTIGGHLDAPAHLRALLANMLQDPQLHSLCDVVLIVQDERFPAHR
AVLAAVSTVFKAMFTNSMRERSAPEIQLHSLDKRAWRMAMHYIYHAQLDI
HDEPTALLLLATARMYHLLPLERFVQNFLVSRVRLHNCFSLLHHAQHYNL
PALENACLRAMHANFEALSLSPAFLQCPYSLLSRLLVSGALVVKCETLVF
DAIQRWVQARRQQRIKHLPQLLCQLRLQSLSDAQLAVIVRAPLVADCLAF
RELVLQHLTRPRHDDVDQRALRAACHLKPCRRDANVFSFCHVQRAVTRMP
AADDEEIVRTPWALDRRSAILWRLKIYPRGYGKAKDLFLSMYVQARSASH
HQPLDLTARFDIFLVNRNDPTQTVSFSSSHHFTDLSDHWGFHRFLQLSQM
RNTALGFLDEQSDSLLLGATMYLPSTPADGDSDDPDPDPDNTCCTSSTPP
PQPST*
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mRNA from alignment at tig00000021_pilon:148342..149709+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil10997.t1 ID=Gchil10997.t1|Name=Gchil10997.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1368bp|location=Sequence derived from alignment at tig00000021_pilon:148342..149709+ (Gracilaria chilensis NLEC103_M9 male)
ATGCGCGCCGATTGTTGTACCATTGGCGGTCATCTCGACGCCCCCGCCCA
TCTCCGTGCCTTGCTTGCCAACATGTTGCAAGACCCCCAGCTCCATTCCC
TCTGCGACGTCGTGCTCATCGTTCAGGATGAACGCTTCCCCGCCCATCGT
GCCGTGCTCGCCGCCGTCTCCACCGTCTTCAAGGCCATGTTCACCAATTC
CATGCGCGAGCGCTCCGCCCCGGAAATACAGCTACACAGCCTGGACAAGC
GGGCGTGGCGCATGGCCATGCATTACATCTATCATGCCCAGCTCGACATT
CACGACGAGCCCACCGCCTTGTTACTGCTCGCCACCGCCCGTATGTACCA
TCTACTCCCGTTGGAACGTTTTGTTCAAAACTTTCTCGTGTCGCGCGTCC
GTCTTCACAACTGTTTCTCCTTGTTACACCATGCACAGCATTACAACTTG
CCTGCATTGGAGAACGCCTGTTTGCGTGCTATGCACGCCAACTTTGAGGC
ACTCTCGCTCTCGCCTGCCTTCTTGCAGTGTCCGTACTCGCTGCTGTCGC
GCCTGCTCGTCAGCGGCGCGCTCGTCGTCAAGTGTGAGACGCTTGTGTTC
GACGCCATACAACGCTGGGTACAAGCGCGCCGCCAACAGCGCATCAAGCA
TTTGCCACAATTGTTATGTCAGCTTCGTCTACAGTCGCTATCCGATGCAC
AATTGGCCGTCATTGTGCGCGCCCCGCTCGTCGCTGACTGTCTCGCCTTT
CGTGAACTTGTCTTGCAACATCTCACACGTCCGCGCCACGATGACGTCGA
TCAACGCGCTTTGCGCGCCGCTTGTCATCTCAAACCATGCCGACGCGATG
CAAACGTCTTCTCCTTCTGTCATGTGCAACGCGCCGTTACGCGCATGCCC
GCCGCCGATGATGAGGAAATTGTGCGTACACCCTGGGCTCTCGATCGTCG
CAGCGCCATCTTGTGGCGTCTCAAGATTTACCCCAGGGGTTACGGTAAGG
CCAAGGACTTGTTTCTGTCCATGTACGTGCAGGCACGTAGCGCGTCGCAC
CACCAACCGCTTGATCTTACTGCGCGCTTCGATATCTTTTTGGTCAATCG
CAACGACCCTACGCAGACGGTGTCCTTCTCGTCGTCGCACCATTTTACCG
ACCTTAGTGACCACTGGGGCTTTCATCGATTCTTGCAGCTGTCTCAGATG
AGAAACACTGCGCTGGGCTTTCTGGACGAGCAGAGCGACTCGTTGCTGCT
GGGCGCCACGATGTACTTGccgagcacgcccgccgacggcgacagcgacg
accccgaccccgaccccgacAACACATGCTGCACCTCTTCCACCCCACCG
CCACAGCCGTCCACATGA
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Coding sequence (CDS) from alignment at tig00000021_pilon:148342..149709+

>Gchil10997.t1 ID=Gchil10997.t1|Name=Gchil10997.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1368bp|location=Sequence derived from alignment at tig00000021_pilon:148342..149709+ (Gracilaria chilensis NLEC103_M9 male)
ATGCGCGCCGATTGTTGTACCATTGGCGGTCATCTCGACGCCCCCGCCCA
TCTCCGTGCCTTGCTTGCCAACATGTTGCAAGACCCCCAGCTCCATTCCC
TCTGCGACGTCGTGCTCATCGTTCAGGATGAACGCTTCCCCGCCCATCGT
GCCGTGCTCGCCGCCGTCTCCACCGTCTTCAAGGCCATGTTCACCAATTC
CATGCGCGAGCGCTCCGCCCCGGAAATACAGCTACACAGCCTGGACAAGC
GGGCGTGGCGCATGGCCATGCATTACATCTATCATGCCCAGCTCGACATT
CACGACGAGCCCACCGCCTTGTTACTGCTCGCCACCGCCCGTATGTACCA
TCTACTCCCGTTGGAACGTTTTGTTCAAAACTTTCTCGTGTCGCGCGTCC
GTCTTCACAACTGTTTCTCCTTGTTACACCATGCACAGCATTACAACTTG
CCTGCATTGGAGAACGCCTGTTTGCGTGCTATGCACGCCAACTTTGAGGC
ACTCTCGCTCTCGCCTGCCTTCTTGCAGTGTCCGTACTCGCTGCTGTCGC
GCCTGCTCGTCAGCGGCGCGCTCGTCGTCAAGTGTGAGACGCTTGTGTTC
GACGCCATACAACGCTGGGTACAAGCGCGCCGCCAACAGCGCATCAAGCA
TTTGCCACAATTGTTATGTCAGCTTCGTCTACAGTCGCTATCCGATGCAC
AATTGGCCGTCATTGTGCGCGCCCCGCTCGTCGCTGACTGTCTCGCCTTT
CGTGAACTTGTCTTGCAACATCTCACACGTCCGCGCCACGATGACGTCGA
TCAACGCGCTTTGCGCGCCGCTTGTCATCTCAAACCATGCCGACGCGATG
CAAACGTCTTCTCCTTCTGTCATGTGCAACGCGCCGTTACGCGCATGCCC
GCCGCCGATGATGAGGAAATTGTGCGTACACCCTGGGCTCTCGATCGTCG
CAGCGCCATCTTGTGGCGTCTCAAGATTTACCCCAGGGGTTACGGTAAGG
CCAAGGACTTGTTTCTGTCCATGTACGTGCAGGCACGTAGCGCGTCGCAC
CACCAACCGCTTGATCTTACTGCGCGCTTCGATATCTTTTTGGTCAATCG
CAACGACCCTACGCAGACGGTGTCCTTCTCGTCGTCGCACCATTTTACCG
ACCTTAGTGACCACTGGGGCTTTCATCGATTCTTGCAGCTGTCTCAGATG
AGAAACACTGCGCTGGGCTTTCTGGACGAGCAGAGCGACTCGTTGCTGCT
GGGCGCCACGATGTACTTGccgagcacgcccgccgacggcgacagcgacg
accccgaccccgaccccgacAACACATGCTGCACCTCTTCCACCCCACCG
CCACAGCCGTCCACATGA
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