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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005705591.1 |
| PFAMs | PHM7_cyt,RSN1_7TM,RSN1_TM |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K21989 |
| Evalue | 1.35e-55 |
| EggNOG OGs | COG5594@1|root,KOG1134@2759|Eukaryota |
| Description | ion transport |
| COG category | I |
| BRITE | ko00000,ko02000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil10994.t1 ID=Gchil10994.t1|Name=Gchil10994.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=837bp MEPPPDVDAIVVTSRNATQSVLINLGIGVAIFVVALIIYDLLRYFAPAHA FPRAIFAPLPASRNYDKTPLSVLPPLPSFPLSWVMRTLRYSEIDTVRTHG LDVALFIRFLGTQAKLFATLTVFTAFVLYPTYITAENRFLPADDPNRVIA MEIATLSNVPKRSARLWVTLFSEIFVVATILLFLYRDMLKYAKYRRIYRA RFDNPANYAIIVQDIPSFLRTPSDVYAIFDKVFPTQVLRVHLVRDAQPLL RLKLKYVTALDRYLFYSARAGVRVAPDAVSNAPPPVPLPLPLPLPLPSNS PSPSSASSSLSSSPHPDEQQPQQQQQQPDIAAPSATSDSILGPHQDVSPP SPSKMQRCTRRSSATASHRSEDRVSRTTSRTTLFPSTDANLWKERQRLLL DQVNHAEQSLDQTAPITGCAIVVFRSKRVATLAATAPVWINASECRVSRA AEPRAVNWNRLSITPYTRRIRQYTSFFVLTAMAIFWTVPATSIQALNNLQ ELADKWPDSFLTGFIENNPGFARLLQGILPPLLLYVLLLIVPLIIRLVVN FERIHSRVLLEAKIRNFIFFFYIMSNFFYVVVIGSVFQKLKELFENPAQI VGILSVSVPAQSTFLMKYVLINAFLGSTLNLLNIGRIIVRPFLLMGAKTP RERRNSDAIFSQYPFAKMYALCCMVSLISFVYSTIAPVICAVATMYFSIG YLCHKQQLLYSHKPQFEGGGFMFRDAWTGLLVGLYFHQLSMIGIFGLKLA TAQAILSVFSLVASLWFQVYCRKTFLFRAKHGSLVDQADMDDEEGLRDEI PEHFAELYLHPGLRSVDIIKEEEFADITYECKPPEA* back to topspliced messenger RNA >Gchil10994.t1 ID=Gchil10994.t1|Name=Gchil10994.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2511bp|location=Sequence derived from alignment at tig00000021_pilon:141930..144440- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGAGCCGCCGCCCGACGTCGATGCCATCGTCGTAACGTCGCGCAACGC CACGCAAAGCGTGCTCATCAATCTGGGCATCGGCGTCGCCATCTTCGTCG TTGCTCTCATTATCTACGACTTGCTGCGCTATTTCGCCCCAGCCCACGCC TTTCCGCGCGCCATCTTCGCTCCTCTTCCGGCCTCGCGCAATTATGACAA GACTCCGCTGTCGGTGCTCCCCCCACTGCCTTCCTTTCCGCTGTCGTGGG TCATGCGCACCCTGCGCTACTCTGAGATCGACACCGTGCGCACCCACGGT CTTGACGTCGCTCTCTTCATTCGTTTCCTAGGCACCCAGGCCAAGCTCTT TGCCACTCTCACCGTTTTCACCGCCTTTGTGCTCTACCCGACCTACATCA CCGCTGAGAATCGCTTTCTCCCTGCCGACGACCCCAATCGCGTCATCGCC ATGGAAATTGCCACCCTGTCCAACGTCCCCAAGCGCTCCGCCCGTCTGTG GGTCACTCTCTTCTCCGAGATTTTCGTCGTTGCCACCATCCTGCTCTTTC TGTACCGCGACATGCTCAAATACGCCAAATACCGTCGCATCTATCGCGCG CGCTTCGACAATCCGGCCAATTACGCCATCATTGTGCAGGACATTCCGTC CTTCCTACGCACCCCGTCCGACGTGTACGCCATCTTTGATAAGGTGTTTC CGACCCAAGTGTTGCGCGTACACCTTGTGCGAGACGCCCAGCCCTTGTTG CGACTCAAACTCAAGTATGTTACCGCCCTCGACCGCTATCTCTTCTACTC GGCGCGCGCTGGCGTGCGAGTCGCCCCGGACGCTGTGTCCAATGCGCCCC CGCCCGTGCCCTTGCCCTTGCCCTTGCCCTTGCCCTTGCCGTCCAACTCG CCCTCCCCGTCTTCTGCGTCGTCGTCCTTGTCGTCGTCGCCCCACCCGGA CGAACAGCAGCCACAACAACAACAACAACAGCCAGACATCGCTGCGCCCT CCGCCACGTCCGATTCGATCCTCGGCCCGCACCAAGACGTGTCACCTCCG TCGCCCTCAAAAATGCAACGCTGCACGAGAAGATCCAGCGCCACGGCTAG CCATCGCTCTGAGGACCGTGTCTCCCGCACCACCTCGCGCACAACCCTTT TCCCCAGCACGGACGCCAACTTGTGGAAGGAGCGTCAACGCCTCCTGCTC GACCAAGTCAACCATGCCGAGCAATCACTTGACCAAACTGCGCCAATCAC CGGCTGCGCCATCGTCGTCTTCCGCTCTAAGCGCGTCGCCACGCTGGCAG CCACTGCCCCCGTGTGGATCAACGCCAGCGAATGTCGTGTGTCTAGGGCT GCTGAGCCCAGAGCCGTCAACTGGAATCGCCTCAGTATCACCCCTTATAC CCGGCGCATCAGACAGTACACCTCGTTTTTCGTGCTCACGGCCATGGCTA TCTTCTGGACAGTGCCTGCCACATCCATCCAGGCTTTGAACAACTTGCAG GAGTTGGCCGACAAGTGGCCCGATTCATTTCTCACCGGTTTTATCGAAAA CAACCCGGGCTTTGCTCGCTTGCTCCAGGGAATCCTACCACCCTTGCTTC TCTACGTTTTGTTGCTGATCGTGCCGCTCATCATTCGCCTGGTGGTCAAC TTTGAGCGCATACACAGTCGCGTGTTGCTCGAGGCCAAGATTCGCAACTT CATCTTCTTCTTCTACATCATGTCCAATTTCTTCTACGTCGTGGTTATTG GCTCTGTGTTTCAAAAGCTCAAGGAATTGTTCGAAAATCCTGCGCAGATT GTGGGTATCCTCTCCGTCTCTGTGCCGGCACAGTCTACCTTTCTCATGAA GTACGTGCTCATCAACGCCTTCTTGGGCAGCACGCTGAATCTGCTCAACA TTGGTCGCATCATTGTACGTCCGTTTCTGCTGATGGGTGCCAAGACACCT CGCGAGCGGCGCAACTCGGACGCCATCTTCTCGCAGTACCCTTTTGCAAA GATGTATGCCTTGTGCTGCATGGTGTCGCTCATTTCGTTTGTGTACAGCA CCATTGCGCCTGTCATTTGTGCGGTTGCCACGATGTACTTTTCCATTGGG TATCTGTGTCACAAGCAGCAGCTGTTGTACTCGCACAAGCCGCAGTTTGA GGGGGGCGGCTTCATGTTTCGAGACGCTTGGACTGGCTTATTGGTCGGCT TGTACTTTCACCAGCTTTCCATGATTGGAATCTTTGGCTTAAAGCTCGCC ACGGCGCAGGCTATTCTCTCCGTATTCTCACTGGTGGCTTCCCTCTGGTT TCAAGTTTATTGCCGAAAGACGTTTCTTTTTCGTGCCAAACATGGCAGTC TGGTTGATCAGGCAGACATGGATGATGAGGAGGGCCTTCGGGACGAAATT CCGGAACACTTTGCCGAGTTGTACTTGCACCCAGGGCTCAGATCTGTCGA CATCATCAAAGAGGAGGAGTTCGCGGACATCACATACGAGTGCAAACCGC CCGAAGCCTGA back to topprotein sequence of Gchil10994.t1 >Gchil10994.t1 ID=Gchil10994.t1|Name=Gchil10994.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=837bp
MEPPPDVDAIVVTSRNATQSVLINLGIGVAIFVVALIIYDLLRYFAPAHA FPRAIFAPLPASRNYDKTPLSVLPPLPSFPLSWVMRTLRYSEIDTVRTHG LDVALFIRFLGTQAKLFATLTVFTAFVLYPTYITAENRFLPADDPNRVIA MEIATLSNVPKRSARLWVTLFSEIFVVATILLFLYRDMLKYAKYRRIYRA RFDNPANYAIIVQDIPSFLRTPSDVYAIFDKVFPTQVLRVHLVRDAQPLL RLKLKYVTALDRYLFYSARAGVRVAPDAVSNAPPPVPLPLPLPLPLPSNS PSPSSASSSLSSSPHPDEQQPQQQQQQPDIAAPSATSDSILGPHQDVSPP SPSKMQRCTRRSSATASHRSEDRVSRTTSRTTLFPSTDANLWKERQRLLL DQVNHAEQSLDQTAPITGCAIVVFRSKRVATLAATAPVWINASECRVSRA AEPRAVNWNRLSITPYTRRIRQYTSFFVLTAMAIFWTVPATSIQALNNLQ ELADKWPDSFLTGFIENNPGFARLLQGILPPLLLYVLLLIVPLIIRLVVN FERIHSRVLLEAKIRNFIFFFYIMSNFFYVVVIGSVFQKLKELFENPAQI VGILSVSVPAQSTFLMKYVLINAFLGSTLNLLNIGRIIVRPFLLMGAKTP RERRNSDAIFSQYPFAKMYALCCMVSLISFVYSTIAPVICAVATMYFSIG YLCHKQQLLYSHKPQFEGGGFMFRDAWTGLLVGLYFHQLSMIGIFGLKLA TAQAILSVFSLVASLWFQVYCRKTFLFRAKHGSLVDQADMDDEEGLRDEI PEHFAELYLHPGLRSVDIIKEEEFADITYECKPPEA* back to topmRNA from alignment at tig00000021_pilon:141930..144440- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil10994.t1 ID=Gchil10994.t1|Name=Gchil10994.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2511bp|location=Sequence derived from alignment at tig00000021_pilon:141930..144440- (Gracilaria chilensis NLEC103_M9 male) ATGGAGCCGCCGCCCGACGTCGATGCCATCGTCGTAACGTCGCGCAACGC
CACGCAAAGCGTGCTCATCAATCTGGGCATCGGCGTCGCCATCTTCGTCG
TTGCTCTCATTATCTACGACTTGCTGCGCTATTTCGCCCCAGCCCACGCC
TTTCCGCGCGCCATCTTCGCTCCTCTTCCGGCCTCGCGCAATTATGACAA
GACTCCGCTGTCGGTGCTCCCCCCACTGCCTTCCTTTCCGCTGTCGTGGG
TCATGCGCACCCTGCGCTACTCTGAGATCGACACCGTGCGCACCCACGGT
CTTGACGTCGCTCTCTTCATTCGTTTCCTAGGCACCCAGGCCAAGCTCTT
TGCCACTCTCACCGTTTTCACCGCCTTTGTGCTCTACCCGACCTACATCA
CCGCTGAGAATCGCTTTCTCCCTGCCGACGACCCCAATCGCGTCATCGCC
ATGGAAATTGCCACCCTGTCCAACGTCCCCAAGCGCTCCGCCCGTCTGTG
GGTCACTCTCTTCTCCGAGATTTTCGTCGTTGCCACCATCCTGCTCTTTC
TGTACCGCGACATGCTCAAATACGCCAAATACCGTCGCATCTATCGCGCG
CGCTTCGACAATCCGGCCAATTACGCCATCATTGTGCAGGACATTCCGTC
CTTCCTACGCACCCCGTCCGACGTGTACGCCATCTTTGATAAGGTGTTTC
CGACCCAAGTGTTGCGCGTACACCTTGTGCGAGACGCCCAGCCCTTGTTG
CGACTCAAACTCAAGTATGTTACCGCCCTCGACCGCTATCTCTTCTACTC
GGCGCGCGCTGGCGTGCGAGTCGCCCCGGACGCTGTGTCCAATGCGCCCC
CGCCCGTGCCCTTGCCCTTGCCCTTGCCCTTGCCCTTGCCGTCCAACTCG
CCCTCCCCGTCTTCTGCGTCGTCGTCCTTGTCGTCGTCGCCCCACCCGGA
CGAACAGCAGCCACAACAACAACAACAACAGCCAGACATCGCTGCGCCCT
CCGCCACGTCCGATTCGATCCTCGGCCCGCACCAAGACGTGTCACCTCCG
TCGCCCTCAAAAATGCAACGCTGCACGAGAAGATCCAGCGCCACGGCTAG
CCATCGCTCTGAGGACCGTGTCTCCCGCACCACCTCGCGCACAACCCTTT
TCCCCAGCACGGACGCCAACTTGTGGAAGGAGCGTCAACGCCTCCTGCTC
GACCAAGTCAACCATGCCGAGCAATCACTTGACCAAACTGCGCCAATCAC
CGGCTGCGCCATCGTCGTCTTCCGCTCTAAGCGCGTCGCCACGCTGGCAG
CCACTGCCCCCGTGTGGATCAACGCCAGCGAATGTCGTGTGTCTAGGGCT
GCTGAGCCCAGAGCCGTCAACTGGAATCGCCTCAGTATCACCCCTTATAC
CCGGCGCATCAGACAGTACACCTCGTTTTTCGTGCTCACGGCCATGGCTA
TCTTCTGGACAGTGCCTGCCACATCCATCCAGGCTTTGAACAACTTGCAG
GAGTTGGCCGACAAGTGGCCCGATTCATTTCTCACCGGTTTTATCGAAAA
CAACCCGGGCTTTGCTCGCTTGCTCCAGGGAATCCTACCACCCTTGCTTC
TCTACGTTTTGTTGCTGATCGTGCCGCTCATCATTCGCCTGGTGGTCAAC
TTTGAGCGCATACACAGTCGCGTGTTGCTCGAGGCCAAGATTCGCAACTT
CATCTTCTTCTTCTACATCATGTCCAATTTCTTCTACGTCGTGGTTATTG
GCTCTGTGTTTCAAAAGCTCAAGGAATTGTTCGAAAATCCTGCGCAGATT
GTGGGTATCCTCTCCGTCTCTGTGCCGGCACAGTCTACCTTTCTCATGAA
GTACGTGCTCATCAACGCCTTCTTGGGCAGCACGCTGAATCTGCTCAACA
TTGGTCGCATCATTGTACGTCCGTTTCTGCTGATGGGTGCCAAGACACCT
CGCGAGCGGCGCAACTCGGACGCCATCTTCTCGCAGTACCCTTTTGCAAA
GATGTATGCCTTGTGCTGCATGGTGTCGCTCATTTCGTTTGTGTACAGCA
CCATTGCGCCTGTCATTTGTGCGGTTGCCACGATGTACTTTTCCATTGGG
TATCTGTGTCACAAGCAGCAGCTGTTGTACTCGCACAAGCCGCAGTTTGA
GGGGGGCGGCTTCATGTTTCGAGACGCTTGGACTGGCTTATTGGTCGGCT
TGTACTTTCACCAGCTTTCCATGATTGGAATCTTTGGCTTAAAGCTCGCC
ACGGCGCAGGCTATTCTCTCCGTATTCTCACTGGTGGCTTCCCTCTGGTT
TCAAGTTTATTGCCGAAAGACGTTTCTTTTTCGTGCCAAACATGGCAGTC
TGGTTGATCAGGCAGACATGGATGATGAGGAGGGCCTTCGGGACGAAATT
CCGGAACACTTTGCCGAGTTGTACTTGCACCCAGGGCTCAGATCTGTCGA
CATCATCAAAGAGGAGGAGTTCGCGGACATCACATACGAGTGCAAACCGC
CCGAAGCCTGA back to topCoding sequence (CDS) from alignment at tig00000021_pilon:141930..144440- >Gchil10994.t1 ID=Gchil10994.t1|Name=Gchil10994.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2511bp|location=Sequence derived from alignment at tig00000021_pilon:141930..144440- (Gracilaria chilensis NLEC103_M9 male) ATGGAGCCGCCGCCCGACGTCGATGCCATCGTCGTAACGTCGCGCAACGC CACGCAAAGCGTGCTCATCAATCTGGGCATCGGCGTCGCCATCTTCGTCG TTGCTCTCATTATCTACGACTTGCTGCGCTATTTCGCCCCAGCCCACGCC TTTCCGCGCGCCATCTTCGCTCCTCTTCCGGCCTCGCGCAATTATGACAA GACTCCGCTGTCGGTGCTCCCCCCACTGCCTTCCTTTCCGCTGTCGTGGG TCATGCGCACCCTGCGCTACTCTGAGATCGACACCGTGCGCACCCACGGT CTTGACGTCGCTCTCTTCATTCGTTTCCTAGGCACCCAGGCCAAGCTCTT TGCCACTCTCACCGTTTTCACCGCCTTTGTGCTCTACCCGACCTACATCA CCGCTGAGAATCGCTTTCTCCCTGCCGACGACCCCAATCGCGTCATCGCC ATGGAAATTGCCACCCTGTCCAACGTCCCCAAGCGCTCCGCCCGTCTGTG GGTCACTCTCTTCTCCGAGATTTTCGTCGTTGCCACCATCCTGCTCTTTC TGTACCGCGACATGCTCAAATACGCCAAATACCGTCGCATCTATCGCGCG CGCTTCGACAATCCGGCCAATTACGCCATCATTGTGCAGGACATTCCGTC CTTCCTACGCACCCCGTCCGACGTGTACGCCATCTTTGATAAGGTGTTTC CGACCCAAGTGTTGCGCGTACACCTTGTGCGAGACGCCCAGCCCTTGTTG CGACTCAAACTCAAGTATGTTACCGCCCTCGACCGCTATCTCTTCTACTC GGCGCGCGCTGGCGTGCGAGTCGCCCCGGACGCTGTGTCCAATGCGCCCC CGCCCGTGCCCTTGCCCTTGCCCTTGCCCTTGCCCTTGCCGTCCAACTCG CCCTCCCCGTCTTCTGCGTCGTCGTCCTTGTCGTCGTCGCCCCACCCGGA CGAACAGCAGCCACAACAACAACAACAACAGCCAGACATCGCTGCGCCCT CCGCCACGTCCGATTCGATCCTCGGCCCGCACCAAGACGTGTCACCTCCG TCGCCCTCAAAAATGCAACGCTGCACGAGAAGATCCAGCGCCACGGCTAG CCATCGCTCTGAGGACCGTGTCTCCCGCACCACCTCGCGCACAACCCTTT TCCCCAGCACGGACGCCAACTTGTGGAAGGAGCGTCAACGCCTCCTGCTC GACCAAGTCAACCATGCCGAGCAATCACTTGACCAAACTGCGCCAATCAC CGGCTGCGCCATCGTCGTCTTCCGCTCTAAGCGCGTCGCCACGCTGGCAG CCACTGCCCCCGTGTGGATCAACGCCAGCGAATGTCGTGTGTCTAGGGCT GCTGAGCCCAGAGCCGTCAACTGGAATCGCCTCAGTATCACCCCTTATAC CCGGCGCATCAGACAGTACACCTCGTTTTTCGTGCTCACGGCCATGGCTA TCTTCTGGACAGTGCCTGCCACATCCATCCAGGCTTTGAACAACTTGCAG GAGTTGGCCGACAAGTGGCCCGATTCATTTCTCACCGGTTTTATCGAAAA CAACCCGGGCTTTGCTCGCTTGCTCCAGGGAATCCTACCACCCTTGCTTC TCTACGTTTTGTTGCTGATCGTGCCGCTCATCATTCGCCTGGTGGTCAAC TTTGAGCGCATACACAGTCGCGTGTTGCTCGAGGCCAAGATTCGCAACTT CATCTTCTTCTTCTACATCATGTCCAATTTCTTCTACGTCGTGGTTATTG GCTCTGTGTTTCAAAAGCTCAAGGAATTGTTCGAAAATCCTGCGCAGATT GTGGGTATCCTCTCCGTCTCTGTGCCGGCACAGTCTACCTTTCTCATGAA GTACGTGCTCATCAACGCCTTCTTGGGCAGCACGCTGAATCTGCTCAACA TTGGTCGCATCATTGTACGTCCGTTTCTGCTGATGGGTGCCAAGACACCT CGCGAGCGGCGCAACTCGGACGCCATCTTCTCGCAGTACCCTTTTGCAAA GATGTATGCCTTGTGCTGCATGGTGTCGCTCATTTCGTTTGTGTACAGCA CCATTGCGCCTGTCATTTGTGCGGTTGCCACGATGTACTTTTCCATTGGG TATCTGTGTCACAAGCAGCAGCTGTTGTACTCGCACAAGCCGCAGTTTGA GGGGGGCGGCTTCATGTTTCGAGACGCTTGGACTGGCTTATTGGTCGGCT TGTACTTTCACCAGCTTTCCATGATTGGAATCTTTGGCTTAAAGCTCGCC ACGGCGCAGGCTATTCTCTCCGTATTCTCACTGGTGGCTTCCCTCTGGTT TCAAGTTTATTGCCGAAAGACGTTTCTTTTTCGTGCCAAACATGGCAGTC TGGTTGATCAGGCAGACATGGATGATGAGGAGGGCCTTCGGGACGAAATT CCGGAACACTTTGCCGAGTTGTACTTGCACCCAGGGCTCAGATCTGTCGA CATCATCAAAGAGGAGGAGTTCGCGGACATCACATACGAGTGCAAACCGC CCGAAGCCTGA back to top
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