Gchil10574.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil10574.t1
Unique NameGchil10574.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length350
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000159_piloncontigtig00000159_pilon:752853..753902 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10574Gchil10574Gracilaria chilensis NLEC103_M9 malegenetig00000159_pilon 752853..753902 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10574.t1.stop1Gchil10574.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000159_pilon 752853..752855 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10574.t1.CDS1Gchil10574.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000159_pilon 752853..753902 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10574.t1.exon1Gchil10574.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000159_pilon 752853..753902 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10574.t1.start1Gchil10574.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000159_pilon 753900..753902 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10574.t1Gchil10574.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000159_pilon 752853..753902 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil10574.t1 ID=Gchil10574.t1|Name=Gchil10574.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=350bp
MVHRFFHFVGLTVPVTAVGAIASLLKINQMGKRSDCLKQQTQNLQILLSK
SLTDLKECSTGLLQATELINQLQDEAKEREMKNREYEECIGGLRKAELEA
EEKIKALEEKLRESELKETQRAHSVETLKERVLLIENKSNQEKETIEAQE
KKLRMFESKEIQRTETVKNLQKQLTISGSKTAQQVRTIAQLKRSNRELKA
SLCSLEKRMREEATPAKHDVQEKEKEGGCGTNVLGEDTEATQTSRIDFKR
QLGAERHVQADPRSRQIGSLDESIDRRGTSGEQLEQDANAQNKRKRPRRR
AKNRARRTIDGRSANENRTDRHATDLDANSTSQMPSRSLNISGRDETRT*
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spliced messenger RNA

>Gchil10574.t1 ID=Gchil10574.t1|Name=Gchil10574.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1050bp|location=Sequence derived from alignment at tig00000159_pilon:752853..753902- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTTCATCGCTTTTTCCACTTCGTGGGCCTCACCGTACCAGTAACCGC
TGTCGGAGCGATTGCATCTCTACTAAAGATCAACCAAATGGGCAAAAGAA
GTGATTGTCTTAAGCAGCAAACCCAAAACCTGCAAATCCTTCTTTCAAAA
TCGCTAACGGATCTGAAGGAGTGCAGCACAGGGTTGCTTCAAGCCACGGA
ACTCATCAATCAGCTACAAGACGAAGCCAAGGAACGCGAAATGAAAAATA
GGGAATACGAGGAATGCATTGGGGGCTTGAGGAAGGCTGAACTGGAAGCG
GAGGAGAAAATAAAAGCGCTCGAGGAAAAGCTGCGAGAATCCGAGTTGAA
GGAGACGCAACGGGCACATTCCGTCGAGACGCTGAAGGAAAGGGTTCTGT
TGATCGAAAACAAATCAAATCAAGAGAAAGAAACGATTGAAGCGCAAGAG
AAAAAGCTTCGGATGTTTGAATCGAAAGAGATCCAACGCACAGAAACTGT
GAAGAACTTGCAGAAACAGTTGACAATTTCTGGTTCAAAGACAGCCCAGC
AGGTGAGAACAATTGCACAGCTGAAAAGAAGCAATAGAGAGTTGAAAGCT
TCGTTATGTTCTCTTGAAAAACGCATGCGGGAAGAAGCGACCCCTGCAAA
ACACGACGTTCAGGAAAAAGAAAAAGAAGGTGGATGTGGCACAAATGTGC
TTGGAGAAGATACTGAAGCGACTCAAACAAGCAGGATTGACTTCAAGAGA
CAGCTGGGTGCAGAACGCCATGTGCAAGCCGACCCCAGGTCGCGGCAGAT
CGGTTCATTAGATGAAAGCATCGACAGGCGCGGAACATCGGGGGAGCAAT
TAGAACAAGACGCAAATGCACAAAATAAGCGCAAGAGGCCTAGAAGGCGT
GCAAAGAATCGTGCTAGGAGAACAATTGATGGACGGTCTGCAAATGAGAA
CCGAACTGACAGGCATGCCACCGATTTGGATGCAAACAGTACCAGTCAGA
TGCCGTCGCGTTCGTTGAATATCTCCGGACGCGATGAGACCAGAACCTAA
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protein sequence of Gchil10574.t1

>Gchil10574.t1 ID=Gchil10574.t1|Name=Gchil10574.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=350bp
MVHRFFHFVGLTVPVTAVGAIASLLKINQMGKRSDCLKQQTQNLQILLSK
SLTDLKECSTGLLQATELINQLQDEAKEREMKNREYEECIGGLRKAELEA
EEKIKALEEKLRESELKETQRAHSVETLKERVLLIENKSNQEKETIEAQE
KKLRMFESKEIQRTETVKNLQKQLTISGSKTAQQVRTIAQLKRSNRELKA
SLCSLEKRMREEATPAKHDVQEKEKEGGCGTNVLGEDTEATQTSRIDFKR
QLGAERHVQADPRSRQIGSLDESIDRRGTSGEQLEQDANAQNKRKRPRRR
AKNRARRTIDGRSANENRTDRHATDLDANSTSQMPSRSLNISGRDETRT*
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mRNA from alignment at tig00000159_pilon:752853..753902-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil10574.t1 ID=Gchil10574.t1|Name=Gchil10574.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1050bp|location=Sequence derived from alignment at tig00000159_pilon:752853..753902- (Gracilaria chilensis NLEC103_M9 male)
ATGGTTCATCGCTTTTTCCACTTCGTGGGCCTCACCGTACCAGTAACCGC
TGTCGGAGCGATTGCATCTCTACTAAAGATCAACCAAATGGGCAAAAGAA
GTGATTGTCTTAAGCAGCAAACCCAAAACCTGCAAATCCTTCTTTCAAAA
TCGCTAACGGATCTGAAGGAGTGCAGCACAGGGTTGCTTCAAGCCACGGA
ACTCATCAATCAGCTACAAGACGAAGCCAAGGAACGCGAAATGAAAAATA
GGGAATACGAGGAATGCATTGGGGGCTTGAGGAAGGCTGAACTGGAAGCG
GAGGAGAAAATAAAAGCGCTCGAGGAAAAGCTGCGAGAATCCGAGTTGAA
GGAGACGCAACGGGCACATTCCGTCGAGACGCTGAAGGAAAGGGTTCTGT
TGATCGAAAACAAATCAAATCAAGAGAAAGAAACGATTGAAGCGCAAGAG
AAAAAGCTTCGGATGTTTGAATCGAAAGAGATCCAACGCACAGAAACTGT
GAAGAACTTGCAGAAACAGTTGACAATTTCTGGTTCAAAGACAGCCCAGC
AGGTGAGAACAATTGCACAGCTGAAAAGAAGCAATAGAGAGTTGAAAGCT
TCGTTATGTTCTCTTGAAAAACGCATGCGGGAAGAAGCGACCCCTGCAAA
ACACGACGTTCAGGAAAAAGAAAAAGAAGGTGGATGTGGCACAAATGTGC
TTGGAGAAGATACTGAAGCGACTCAAACAAGCAGGATTGACTTCAAGAGA
CAGCTGGGTGCAGAACGCCATGTGCAAGCCGACCCCAGGTCGCGGCAGAT
CGGTTCATTAGATGAAAGCATCGACAGGCGCGGAACATCGGGGGAGCAAT
TAGAACAAGACGCAAATGCACAAAATAAGCGCAAGAGGCCTAGAAGGCGT
GCAAAGAATCGTGCTAGGAGAACAATTGATGGACGGTCTGCAAATGAGAA
CCGAACTGACAGGCATGCCACCGATTTGGATGCAAACAGTACCAGTCAGA
TGCCGTCGCGTTCGTTGAATATCTCCGGACGCGATGAGACCAGAACCTAA
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Coding sequence (CDS) from alignment at tig00000159_pilon:752853..753902-

>Gchil10574.t1 ID=Gchil10574.t1|Name=Gchil10574.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1050bp|location=Sequence derived from alignment at tig00000159_pilon:752853..753902- (Gracilaria chilensis NLEC103_M9 male)
ATGGTTCATCGCTTTTTCCACTTCGTGGGCCTCACCGTACCAGTAACCGC
TGTCGGAGCGATTGCATCTCTACTAAAGATCAACCAAATGGGCAAAAGAA
GTGATTGTCTTAAGCAGCAAACCCAAAACCTGCAAATCCTTCTTTCAAAA
TCGCTAACGGATCTGAAGGAGTGCAGCACAGGGTTGCTTCAAGCCACGGA
ACTCATCAATCAGCTACAAGACGAAGCCAAGGAACGCGAAATGAAAAATA
GGGAATACGAGGAATGCATTGGGGGCTTGAGGAAGGCTGAACTGGAAGCG
GAGGAGAAAATAAAAGCGCTCGAGGAAAAGCTGCGAGAATCCGAGTTGAA
GGAGACGCAACGGGCACATTCCGTCGAGACGCTGAAGGAAAGGGTTCTGT
TGATCGAAAACAAATCAAATCAAGAGAAAGAAACGATTGAAGCGCAAGAG
AAAAAGCTTCGGATGTTTGAATCGAAAGAGATCCAACGCACAGAAACTGT
GAAGAACTTGCAGAAACAGTTGACAATTTCTGGTTCAAAGACAGCCCAGC
AGGTGAGAACAATTGCACAGCTGAAAAGAAGCAATAGAGAGTTGAAAGCT
TCGTTATGTTCTCTTGAAAAACGCATGCGGGAAGAAGCGACCCCTGCAAA
ACACGACGTTCAGGAAAAAGAAAAAGAAGGTGGATGTGGCACAAATGTGC
TTGGAGAAGATACTGAAGCGACTCAAACAAGCAGGATTGACTTCAAGAGA
CAGCTGGGTGCAGAACGCCATGTGCAAGCCGACCCCAGGTCGCGGCAGAT
CGGTTCATTAGATGAAAGCATCGACAGGCGCGGAACATCGGGGGAGCAAT
TAGAACAAGACGCAAATGCACAAAATAAGCGCAAGAGGCCTAGAAGGCGT
GCAAAGAATCGTGCTAGGAGAACAATTGATGGACGGTCTGCAAATGAGAA
CCGAACTGACAGGCATGCCACCGATTTGGATGCAAACAGTACCAGTCAGA
TGCCGTCGCGTTCGTTGAATATCTCCGGACGCGATGAGACCAGAACCTAA
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