Gchil10536.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil10536.t1
Unique NameGchil10536.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length598
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000159_piloncontigtig00000159_pilon:540332..542326 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005708683.1
Preferred nameNAGS1
PFAMsAA_kinase,Acetyltransf_1
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00064
KEGG koko:K14682
KEGG ReactionR00259
KEGG Pathwayko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00028
Evalue5.84e-161
EggNOG OGsCOG0548@1|root,KOG2436@2759|Eukaryota
EC2.3.1.1
Descriptionacetyl-CoA:L-glutamate N-acetyltransferase activity
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10536Gchil10536Gracilaria chilensis NLEC103_M9 malegenetig00000159_pilon 540332..542326 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10536.t1Gchil10536.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000159_pilon 540332..542326 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10536.t1.stop1Gchil10536.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000159_pilon 540332..540334 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10536.t1.CDS1Gchil10536.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000159_pilon 540332..540364 -
Gchil10536.t1.CDS2Gchil10536.t1.CDS2Gracilaria chilensis NLEC103_M9 maleCDStig00000159_pilon 540566..542326 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10536.t1.exon1Gchil10536.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000159_pilon 540332..540364 -
Gchil10536.t1.exon2Gchil10536.t1.exon2Gracilaria chilensis NLEC103_M9 maleexontig00000159_pilon 540566..542326 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10536.t1.intron1Gchil10536.t1.intron1Gracilaria chilensis NLEC103_M9 maleintrontig00000159_pilon 540365..540565 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10536.t1.start1Gchil10536.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000159_pilon 542324..542326 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil10536.t1 ID=Gchil10536.t1|Name=Gchil10536.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=598bp
MALLHELPAAFVPPSLFLSPFRVLSPGLRCVAPAAPAAFYACASLNGLGN
GNGHAGSISSPSEFSSASNPPSRSFPEGDDIYFDGLSYPTQVLEWCTTNP
EAFQPAPDQDSFSSQSHHTHHRDHDVVDSLPDRICEGDHHVSASRVHQNF
VNTFRMSSPYINAHQGLVFVIHLPGAMLHERLFSAVMEDIALMHVVGIKI
VLVLGPQAQIDRRMKAEELPSYFIDGIRITDLRTLQLVKEAAGSMRFEVE
STLGRGVKNMPSASRISIVSGSFYSAQPVGIINGQDFGYSGKVRRVDVEA
INRRLQSGDIIIIPNVGFSPSGQMFNCRSEEVAAACASQMHAEKLIFMGS
GETLFDIRTDHTIPNLSLKTAARFLRTRAHELPIPFRKALECSVDALKNG
VRRAHLLNRLVDGALLMEIFHRDGVGLMISRDLYEGFRRANLADVSGLQE
IIRPLEQQGILKPRSRRMLEQHIHEYVVIERDGMVIACLSLSQMEDDPEW
AELGCLAVHHDYRKLGKGDAMLGFTERMAFNMGVRFLFILSTQSFDWFQE
RGFSEVTIEDLPPSRQAKYDKTRKSKVFLKVLEGSRAVDEAEVLHHL*
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spliced messenger RNA

>Gchil10536.t1 ID=Gchil10536.t1|Name=Gchil10536.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1794bp|location=Sequence derived from alignment at tig00000159_pilon:540332..542326- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTCTTCTGCATGAGCTCCCCGCCGCTTTTGTCCCGCCCTCTCTCTT
CCTTTCGCCGTTTCGCGTGCTGTCTCCTGGCCTGCGCTGTGTGGCCCCCG
CCGCCCCTGCCGCGTTTTATGCGTGCGCGTCGTTGAACGGGCTGGGAAAT
GGGAATGGCCACGCAGGTTCTATTTCGTCGCCCTCTGAGTTCTCCTCCGC
TTCCAATCCACCCTCACGCTCTTTTCCTGAGGGTGATGATATTTACTTTG
ATGGCCTTTCATACCCTACCCAGGTGTTGGAGTGGTGTACCACCAACCCG
GAGGCATTTCAACCGGCTCCTGATCAGGACTCCTTTTCATCCCAATCGCA
TCACACCCATCACCGTGACCACGATGTTGTCGACTCGCTTCCAGACCGCA
TTTGTGAGGGAGATCATCACGTTTCTGCATCTCGCGTTCACCAAAACTTT
GTGAATACTTTTCGCATGAGTTCGCCATACATCAACGCCCATCAGGGATT
GGTCTTCGTCATTCACCTACCTGGTGCCATGTTGCACGAACGTCTCTTTT
CTGCTGTTATGGAGGATATTGCGCTTATGCATGTCGTTGGCATCAAAATT
GTGCTTGTTCTTGGTCCACAGGCTCAGATTGACCGTCGAATGAAAGCTGA
GGAATTGCCCTCCTACTTTATAGATGGCATTCGTATAACTGACTTGCGCA
CATTGCAGCTCGTCAAGGAAGCTGCTGGCAGTATGAGGTTTGAAGTTGAG
AGCACTCTTGGACGTGGCGTTAAGAACATGCCCAGCGCCAGTCGAATCAG
CATTGTGAGCGGCAGCTTCTATTCAGCCCAGCCCGTTGGAATCATTAACG
GTCAGGACTTTGGATATTCTGGCAAGGTTCGTCGCGTCGATGTGGAAGCT
ATAAATCGACGATTGCAGAGTGGTGATATCATCATTATTCCTAACGTCGG
CTTTTCTCCCTCAGGCCAAATGTTCAACTGCAGGTCCGAAGAAGTTGCAG
CCGCCTGTGCTAGCCAAATGCACGCTGAGAAGCTCATCTTCATGGGAAGC
GGCGAGACTCTGTTTGACATTCGCACCGATCACACCATCCCCAATCTTTC
GCTCAAGACTGCCGCCCGTTTCTTACGAACCAGAGCACATGAGCTGCCGA
TTCCATTCCGAAAAGCCCTGGAGTGCTCTGTCGACGCTCTGAAGAATGGT
GTTCGCCGTGCCCATCTGCTGAATCGCCTCGTGGACGGAGCACTACTCAT
GGAAATATTTCACAGAGATGGCGTGGGGTTAATGATTTCTCGCGACTTGT
ACGAAGGCTTTAGACGAGCCAATCTAGCCGATGTGAGCGGCCTCCAGGAA
ATTATCCGGCCGCTTGAGCAGCAAGGCATCCTCAAACCTCGGTCCAGGAG
GATGCTTGAACAGCACATCCATGAATATGTTGTCATAGAGAGGGATGGAA
TGGTCATTGCTTGCCTGTCACTGTCGCAAATGGAAGATGATCCCGAGTGG
GCTGAACTCGGTTGTCTAGCCGTTCATCATGATTACCGGAAACTTGGGAA
AGGCGATGCAATGCTCGGTTTCACGGAACGAATGGCGTTTAACATGGGTG
TCCGCTTTCTTTTTATTCTTTCTACTCAGAGCTTTGATTGGTTCCAAGAA
CGCGGTTTTTCAGAGGTCACCATTGAAGATCTCCCTCCTTCCAGACAGGC
CAAGTATGACAAAACCAGAAAGTCAAAGGTTTTTCTCAAGGTGCTGGAGG
GTAGCAGAGCGGTTGACGAAGCGGAGGTTCTCCACCACCTGTGA
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protein sequence of Gchil10536.t1

>Gchil10536.t1 ID=Gchil10536.t1|Name=Gchil10536.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=598bp
MALLHELPAAFVPPSLFLSPFRVLSPGLRCVAPAAPAAFYACASLNGLGN
GNGHAGSISSPSEFSSASNPPSRSFPEGDDIYFDGLSYPTQVLEWCTTNP
EAFQPAPDQDSFSSQSHHTHHRDHDVVDSLPDRICEGDHHVSASRVHQNF
VNTFRMSSPYINAHQGLVFVIHLPGAMLHERLFSAVMEDIALMHVVGIKI
VLVLGPQAQIDRRMKAEELPSYFIDGIRITDLRTLQLVKEAAGSMRFEVE
STLGRGVKNMPSASRISIVSGSFYSAQPVGIINGQDFGYSGKVRRVDVEA
INRRLQSGDIIIIPNVGFSPSGQMFNCRSEEVAAACASQMHAEKLIFMGS
GETLFDIRTDHTIPNLSLKTAARFLRTRAHELPIPFRKALECSVDALKNG
VRRAHLLNRLVDGALLMEIFHRDGVGLMISRDLYEGFRRANLADVSGLQE
IIRPLEQQGILKPRSRRMLEQHIHEYVVIERDGMVIACLSLSQMEDDPEW
AELGCLAVHHDYRKLGKGDAMLGFTERMAFNMGVRFLFILSTQSFDWFQE
RGFSEVTIEDLPPSRQAKYDKTRKSKVFLKVLEGSRAVDEAEVLHHL*
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mRNA from alignment at tig00000159_pilon:540332..542326-

Legend: polypeptideCDSexonstart_codonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil10536.t1 ID=Gchil10536.t1|Name=Gchil10536.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1995bp|location=Sequence derived from alignment at tig00000159_pilon:540332..542326- (Gracilaria chilensis NLEC103_M9 male)
ATGGCTCTTCTGCATGAGCTCCCCGCCGCTTTTGTCCCGCCCTCTCTCTT
CCTTTCGCCGTTTCGCGTGCTGTCTCCTGGCCTGCGCTGTGTGGCCCCCG
CCGCCCCTGCCGCGTTTTATGCGTGCGCGTCGTTGAACGGGCTGGGAAAT
GGGAATGGCCACGCAGGTTCTATTTCGTCGCCCTCTGAGTTCTCCTCCGC
TTCCAATCCACCCTCACGCTCTTTTCCTGAGGGTGATGATATTTACTTTG
ATGGCCTTTCATACCCTACCCAGGTGTTGGAGTGGTGTACCACCAACCCG
GAGGCATTTCAACCGGCTCCTGATCAGGACTCCTTTTCATCCCAATCGCA
TCACACCCATCACCGTGACCACGATGTTGTCGACTCGCTTCCAGACCGCA
TTTGTGAGGGAGATCATCACGTTTCTGCATCTCGCGTTCACCAAAACTTT
GTGAATACTTTTCGCATGAGTTCGCCATACATCAACGCCCATCAGGGATT
GGTCTTCGTCATTCACCTACCTGGTGCCATGTTGCACGAACGTCTCTTTT
CTGCTGTTATGGAGGATATTGCGCTTATGCATGTCGTTGGCATCAAAATT
GTGCTTGTTCTTGGTCCACAGGCTCAGATTGACCGTCGAATGAAAGCTGA
GGAATTGCCCTCCTACTTTATAGATGGCATTCGTATAACTGACTTGCGCA
CATTGCAGCTCGTCAAGGAAGCTGCTGGCAGTATGAGGTTTGAAGTTGAG
AGCACTCTTGGACGTGGCGTTAAGAACATGCCCAGCGCCAGTCGAATCAG
CATTGTGAGCGGCAGCTTCTATTCAGCCCAGCCCGTTGGAATCATTAACG
GTCAGGACTTTGGATATTCTGGCAAGGTTCGTCGCGTCGATGTGGAAGCT
ATAAATCGACGATTGCAGAGTGGTGATATCATCATTATTCCTAACGTCGG
CTTTTCTCCCTCAGGCCAAATGTTCAACTGCAGGTCCGAAGAAGTTGCAG
CCGCCTGTGCTAGCCAAATGCACGCTGAGAAGCTCATCTTCATGGGAAGC
GGCGAGACTCTGTTTGACATTCGCACCGATCACACCATCCCCAATCTTTC
GCTCAAGACTGCCGCCCGTTTCTTACGAACCAGAGCACATGAGCTGCCGA
TTCCATTCCGAAAAGCCCTGGAGTGCTCTGTCGACGCTCTGAAGAATGGT
GTTCGCCGTGCCCATCTGCTGAATCGCCTCGTGGACGGAGCACTACTCAT
GGAAATATTTCACAGAGATGGCGTGGGGTTAATGATTTCTCGCGACTTGT
ACGAAGGCTTTAGACGAGCCAATCTAGCCGATGTGAGCGGCCTCCAGGAA
ATTATCCGGCCGCTTGAGCAGCAAGGCATCCTCAAACCTCGGTCCAGGAG
GATGCTTGAACAGCACATCCATGAATATGTTGTCATAGAGAGGGATGGAA
TGGTCATTGCTTGCCTGTCACTGTCGCAAATGGAAGATGATCCCGAGTGG
GCTGAACTCGGTTGTCTAGCCGTTCATCATGATTACCGGAAACTTGGGAA
AGGCGATGCAATGCTCGGTTTCACGGAACGAATGGCGTTTAACATGGGTG
TCCGCTTTCTTTTTATTCTTTCTACTCAGAGCTTTGATTGGTTCCAAGAA
CGCGGTTTTTCAGAGGTCACCATTGAAGATCTCCCTCCTTCCAGACAGGC
CAAGTATGACAAAACCAGAAAGTCAAAGGTTTTTCTCAAGGTGCTGGAGG
GTAGCAGAGCGGTACGTCCATAACGCTTCTTTTCCGCGATCATGCGCGCT
CCCCGCATTCTATGCAATACCTGAAAACTGTTTATTGTCCCCTACAACGG
GCGCAGTTCACCTCTTTTAACTTTCTTGCGAGATTTGGTTCTCTAAACTA
AGCAACGCTGACCAGTACCTACGTTTGTGCGGTTTCATTGGTTCAATGCT
CCCCCTGATTAGGTTGACGAAGCGGAGGTTCTCCACCACCTGTGA
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Coding sequence (CDS) from alignment at tig00000159_pilon:540332..542326-

>Gchil10536.t1 ID=Gchil10536.t1|Name=Gchil10536.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1794bp|location=Sequence derived from alignment at tig00000159_pilon:540332..542326- (Gracilaria chilensis NLEC103_M9 male)
ATGGCTCTTCTGCATGAGCTCCCCGCCGCTTTTGTCCCGCCCTCTCTCTT
CCTTTCGCCGTTTCGCGTGCTGTCTCCTGGCCTGCGCTGTGTGGCCCCCG
CCGCCCCTGCCGCGTTTTATGCGTGCGCGTCGTTGAACGGGCTGGGAAAT
GGGAATGGCCACGCAGGTTCTATTTCGTCGCCCTCTGAGTTCTCCTCCGC
TTCCAATCCACCCTCACGCTCTTTTCCTGAGGGTGATGATATTTACTTTG
ATGGCCTTTCATACCCTACCCAGGTGTTGGAGTGGTGTACCACCAACCCG
GAGGCATTTCAACCGGCTCCTGATCAGGACTCCTTTTCATCCCAATCGCA
TCACACCCATCACCGTGACCACGATGTTGTCGACTCGCTTCCAGACCGCA
TTTGTGAGGGAGATCATCACGTTTCTGCATCTCGCGTTCACCAAAACTTT
GTGAATACTTTTCGCATGAGTTCGCCATACATCAACGCCCATCAGGGATT
GGTCTTCGTCATTCACCTACCTGGTGCCATGTTGCACGAACGTCTCTTTT
CTGCTGTTATGGAGGATATTGCGCTTATGCATGTCGTTGGCATCAAAATT
GTGCTTGTTCTTGGTCCACAGGCTCAGATTGACCGTCGAATGAAAGCTGA
GGAATTGCCCTCCTACTTTATAGATGGCATTCGTATAACTGACTTGCGCA
CATTGCAGCTCGTCAAGGAAGCTGCTGGCAGTATGAGGTTTGAAGTTGAG
AGCACTCTTGGACGTGGCGTTAAGAACATGCCCAGCGCCAGTCGAATCAG
CATTGTGAGCGGCAGCTTCTATTCAGCCCAGCCCGTTGGAATCATTAACG
GTCAGGACTTTGGATATTCTGGCAAGGTTCGTCGCGTCGATGTGGAAGCT
ATAAATCGACGATTGCAGAGTGGTGATATCATCATTATTCCTAACGTCGG
CTTTTCTCCCTCAGGCCAAATGTTCAACTGCAGGTCCGAAGAAGTTGCAG
CCGCCTGTGCTAGCCAAATGCACGCTGAGAAGCTCATCTTCATGGGAAGC
GGCGAGACTCTGTTTGACATTCGCACCGATCACACCATCCCCAATCTTTC
GCTCAAGACTGCCGCCCGTTTCTTACGAACCAGAGCACATGAGCTGCCGA
TTCCATTCCGAAAAGCCCTGGAGTGCTCTGTCGACGCTCTGAAGAATGGT
GTTCGCCGTGCCCATCTGCTGAATCGCCTCGTGGACGGAGCACTACTCAT
GGAAATATTTCACAGAGATGGCGTGGGGTTAATGATTTCTCGCGACTTGT
ACGAAGGCTTTAGACGAGCCAATCTAGCCGATGTGAGCGGCCTCCAGGAA
ATTATCCGGCCGCTTGAGCAGCAAGGCATCCTCAAACCTCGGTCCAGGAG
GATGCTTGAACAGCACATCCATGAATATGTTGTCATAGAGAGGGATGGAA
TGGTCATTGCTTGCCTGTCACTGTCGCAAATGGAAGATGATCCCGAGTGG
GCTGAACTCGGTTGTCTAGCCGTTCATCATGATTACCGGAAACTTGGGAA
AGGCGATGCAATGCTCGGTTTCACGGAACGAATGGCGTTTAACATGGGTG
TCCGCTTTCTTTTTATTCTTTCTACTCAGAGCTTTGATTGGTTCCAAGAA
CGCGGTTTTTCAGAGGTCACCATTGAAGATCTCCCTCCTTCCAGACAGGC
CAAGTATGACAAAACCAGAAAGTCAAAGGTTTTTCTCAAGGTGCTGGAGG
GTAGCAGAGCGGTTGACGAAGCGGAGGTTCTCCACCACCTGTGA
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