Gchil10504.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gchil10504.t1
Unique Name	Gchil10504.t1
Type	mRNA
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	462

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000159_pilon	contig	tig00000159_pilon:311051..312436 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	10224.XP_002736853.1
Preferred name	SIRT6
PFAMs	SIR2
Max annot lvl	33208\|Metazoa
KEGG ko	ko:K11416
KEGG Pathway	ko04714,ko05230,map04714,map05230
GOs	GO:0000003,GO:0000018,GO:0000166,GO:0000228,GO:0000578,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000792,GO:0001672,GO:0001936,GO:0001938,GO:0003002,GO:0003006,GO:0003007,GO:0003241,GO:0003245,GO:0003247,GO:0003674,GO:0003682,GO:0003712,GO:0003714,GO:0003824,GO:0003950,GO:0003956,GO:0004407,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005654,GO:0005694,GO:0005720,GO:0005724,GO:0005737,GO:0006109,GO:0006110,GO:0006139,GO:0006140,GO:0006259,GO:0006281,GO:0006282,GO:0006284,GO:0006325,GO:0006355,GO:0006464,GO:0006471,GO:0006476,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007028,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007315,GO:0007350,GO:0007351,GO:0007389,GO:0007507,GO:0007517,GO:0007568,GO:0008134,GO:0008150,GO:0008152,GO:0008270,GO:0008284,GO:0008285,GO:0008340,GO:0008358,GO:0008595,GO:0009266,GO:0009408,GO:0009628,GO:0009653,GO:0009790,GO:0009798,GO:0009880,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009948,GO:0009952,GO:0009987,GO:0009994,GO:0010259,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010563,GO:0010569,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0010675,GO:0010677,GO:0010827,GO:0010829,GO:0010847,GO:0012505,GO:0014706,GO:0016043,GO:0016049,GO:0016569,GO:0016570,GO:0016575,GO:0016740,GO:0016757,GO:0016763,GO:0016787,GO:0016810,GO:0016811,GO:0017136,GO:0019213,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030719,GO:0030808,GO:0030809,GO:0030811,GO:0030812,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0031445,GO:0031453,GO:0031647,GO:0031648,GO:0031933,GO:0031935,GO:0031937,GO:0031938,GO:0031940,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032129,GO:0032204,GO:0032206,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032991,GO:0033043,GO:0033044,GO:0033500,GO:0033554,GO:0033558,GO:0034622,GO:0034641,GO:0034762,GO:0034763,GO:0034979,GO:0035265,GO:0035282,GO:0035601,GO:0035770,GO:0036094,GO:0036211,GO:0036464,GO:0040007,GO:0042127,GO:0042325,GO:0042326,GO:0042592,GO:0042593,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043467,GO:0043470,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0045495,GO:0045765,GO:0045766,GO:0045799,GO:0045820,GO:0045892,GO:0045912,GO:0045934,GO:0045935,GO:0045936,GO:0045980,GO:0046324,GO:0046325,GO:0046483,GO:0046872,GO:0046914,GO:0046969,GO:0048037,GO:0048145,GO:0048146,GO:0048468,GO:0048469,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048588,GO:0048589,GO:0048599,GO:0048609,GO:0048644,GO:0048729,GO:0048731,GO:0048738,GO:0048856,GO:0048869,GO:0048878,GO:0050662,GO:0050678,GO:0050679,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051052,GO:0051054,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051193,GO:0051195,GO:0051196,GO:0051198,GO:0051239,GO:0051240,GO:0051252,GO:0051253,GO:0051276,GO:0051287,GO:0051704,GO:0051716,GO:0055008,GO:0055017,GO:0060255,GO:0060293,GO:0060415,GO:0060419,GO:0060537,GO:0060560,GO:0060688,GO:0060968,GO:0061061,GO:0061647,GO:0062012,GO:0062014,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070403,GO:0070925,GO:0070932,GO:0071704,GO:0071826,GO:0071840,GO:0072091,GO:0072359,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0098687,GO:0098732,GO:0140096,GO:0140110,GO:1900371,GO:1900372,GO:1900542,GO:1900543,GO:1901265,GO:1901342,GO:1901360,GO:1901363,GO:1901564,GO:1902275,GO:1902679,GO:1902732,GO:1903506,GO:1903507,GO:1903578,GO:1903579,GO:1903863,GO:1904018,GO:1905269,GO:1905330,GO:1905332,GO:1905547,GO:1905549,GO:1905553,GO:1905555,GO:1905562,GO:1905564,GO:1990619,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000648,GO:2000779,GO:2001020,GO:2001141,GO:2001169,GO:2001170,GO:2001252
Evalue	4.31e-69
EggNOG OGs	COG0846@1\|root,KOG1905@2759\|Eukaryota,38FZB@33154\|Opisthokonta,3B9VN@33208\|Metazoa,3CZVD@33213\|Bilateria
EC	2.4.2.31
Description	post-embryonic cardiac muscle cell growth involved in heart morphogenesis
COG category	BK
BRITE	ko00000,ko00001,ko01000,ko03036

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil10504	Gchil10504	Gracilaria chilensis NLEC103_M9 male	gene	tig00000159_pilon 311051..312436 -

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil10504.t1.stop1	Gchil10504.t1.stop1	Gracilaria chilensis NLEC103_M9 male	stop_codon	tig00000159_pilon 311051..311053 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil10504.t1.CDS1	Gchil10504.t1.CDS1	Gracilaria chilensis NLEC103_M9 male	CDS	tig00000159_pilon 311051..312436 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil10504.t1.exon1	Gchil10504.t1.exon1	Gracilaria chilensis NLEC103_M9 male	exon	tig00000159_pilon 311051..312436 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil10504.t1.start1	Gchil10504.t1.start1	Gracilaria chilensis NLEC103_M9 male	start_codon	tig00000159_pilon 312434..312436 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil10504.t1	Gchil10504.t1	Gracilaria chilensis NLEC103_M9 male	polypeptide	tig00000159_pilon 311051..312436 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00000159_pilon:311051..312436-
coding sequence from alignment at tig00000159_pilon:311051..312436-

mRNA sequence

>Gchil10504.t1 ID=Gchil10504.t1|Name=Gchil10504.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=462bp
MTSEHAYADRLSTHGYKGKLDLPQLPDPPLAVLHKSRFLADCIRNASHVV
VHTGAGISTSAGINDFRGPNGVWTTQRKRAKRPRTSVIAETAPDAHSHVT
FDNAVPTLTHMALVGLHKASHVHYVISQNVDCLHLRSGLPRQALSELHGN
LFIEWCAHCRREVILDSQTETVGMNPTSSICDCGRPMTDKALDWDDVLPE
PDFELAKKHSAAADFNLVLGTSCQMEPARSLHFRGAGGKKSRAIVNLSRT
DFDDRFGICIRAYCDTVFAIIAVELGVRIPPFERLVKLVLSVRWVDRGVH
YRVTSANGLVKYDMQVRHRCADGDSKQKMWSDYVSEFPHNATIPTTGRHI
EAEVETKKGKLRLEATAERRKLTKAEGEIVVEQKDWEARGAEIIKELNNR
ILNDGKSRKPQQSADSNVWFVAGMRRGWSVCCLCRKEIWCGQNRRYEHMK
ACAASFKRFER*

spliced messenger RNA

>Gchil10504.t1 ID=Gchil10504.t1|Name=Gchil10504.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1386bp|location=Sequence derived from alignment at tig00000159_pilon:311051..312436- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACCTCCGAACACGCCTACGCTGATCGTCTCTCCACTCACGGCTACAA
GGGAAAGCTCGATCTCCCACAACTGCCAGATCCCCCGCTCGCCGTCTTGC
ACAAGTCCCGATTTCTAGCCGATTGCATTCGCAATGCATCCCATGTCGTC
GTGCACACTGGCGCGGGAATATCCACTAGCGCGGGAATCAATGACTTTCG
CGGCCCAAACGGTGTCTGGACCACGCAGCGAAAACGAGCTAAACGCCCGC
GAACCTCCGTCATCGCTGAGACTGCACCGGATGCCCACTCTCATGTTACG
TTTGACAACGCTGTCCCTACTCTCACCCACATGGCACTTGTTGGTCTTCA
CAAAGCCTCTCACGTGCACTATGTAATTTCACAGAATGTAGACTGCTTGC
ATTTGCGCTCCGGTCTTCCCCGACAGGCCTTGTCGGAGCTGCATGGAAAC
CTTTTCATCGAGTGGTGCGCTCATTGCCGCCGCGAGGTTATTCTCGATTC
CCAAACCGAAACAGTGGGCATGAACCCTACATCCAGTATTTGCGACTGCG
GTCGCCCAATGACAGATAAGGCTCTGGACTGGGACGATGTGCTTCCAGAG
CCGGACTTTGAGCTTGCGAAAAAGCACAGTGCGGCAGCTGATTTCAACTT
GGTACTAGGCACCTCGTGTCAGATGGAGCCTGCCAGATCGTTGCACTTCC
GAGGCGCTGGCGGCAAGAAAAGTCGAGCAATCGTCAATCTCAGCCGTACT
GATTTTGATGACCGCTTCGGTATCTGTATCAGAGCTTATTGTGATACTGT
TTTCGCCATTATTGCTGTTGAGCTTGGCGTGCGGATTCCCCCGTTTGAAA
GACTTGTGAAACTAGTCTTAAGCGTTCGATGGGTAGATAGAGGCGTTCAT
TATCGGGTGACCTCGGCGAATGGGCTCGTCAAGTACGATATGCAGGTTCG
GCACAGGTGTGCCGATGGCGATAGCAAACAAAAAATGTGGTCAGACTATG
TATCGGAATTCCCACACAACGCCACCATTCCAACCACTGGTCGGCATATT
GAAGCGGAAGTTGAAACAAAAAAAGGAAAGCTTCGGCTTGAAGCAACAGC
TGAAAGACGGAAGCTCACGAAGGCTGAAGGTGAAATTGTGGTGGAGCAAA
AGGATTGGGAGGCCCGTGGAGCGGAAATTATTAAAGAATTGAACAACCGT
ATTCTAAATGATGGTAAAAGCCGCAAACCCCAGCAATCTGCAGACAGTAA
TGTATGGTTCGTCGCGGGCATGCGAAGAGGGTGGAGTGTTTGCTGTCTTT
GCAGAAAAGAAATATGGTGTGGCCAAAATCGGAGATATGAACACATGAAG
GCTTGTGCAGCATCGTTCAAACGATTTGAACGATAA

protein sequence of Gchil10504.t1

>Gchil10504.t1 ID=Gchil10504.t1|Name=Gchil10504.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=462bp
MTSEHAYADRLSTHGYKGKLDLPQLPDPPLAVLHKSRFLADCIRNASHVV
VHTGAGISTSAGINDFRGPNGVWTTQRKRAKRPRTSVIAETAPDAHSHVT
FDNAVPTLTHMALVGLHKASHVHYVISQNVDCLHLRSGLPRQALSELHGN
LFIEWCAHCRREVILDSQTETVGMNPTSSICDCGRPMTDKALDWDDVLPE
PDFELAKKHSAAADFNLVLGTSCQMEPARSLHFRGAGGKKSRAIVNLSRT
DFDDRFGICIRAYCDTVFAIIAVELGVRIPPFERLVKLVLSVRWVDRGVH
YRVTSANGLVKYDMQVRHRCADGDSKQKMWSDYVSEFPHNATIPTTGRHI
EAEVETKKGKLRLEATAERRKLTKAEGEIVVEQKDWEARGAEIIKELNNR
ILNDGKSRKPQQSADSNVWFVAGMRRGWSVCCLCRKEIWCGQNRRYEHMK
ACAASFKRFER*

mRNA from alignment at tig00000159_pilon:311051..312436-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gchil10504.t1 ID=Gchil10504.t1|Name=Gchil10504.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1386bp|location=Sequence derived from alignment at tig00000159_pilon:311051..312436- (Gracilaria chilensis NLEC103_M9 male)
ATGACCTCCGAACACGCCTACGCTGATCGTCTCTCCACTCACGGCTACAA
GGGAAAGCTCGATCTCCCACAACTGCCAGATCCCCCGCTCGCCGTCTTGC
ACAAGTCCCGATTTCTAGCCGATTGCATTCGCAATGCATCCCATGTCGTC
GTGCACACTGGCGCGGGAATATCCACTAGCGCGGGAATCAATGACTTTCG
CGGCCCAAACGGTGTCTGGACCACGCAGCGAAAACGAGCTAAACGCCCGC
GAACCTCCGTCATCGCTGAGACTGCACCGGATGCCCACTCTCATGTTACG
TTTGACAACGCTGTCCCTACTCTCACCCACATGGCACTTGTTGGTCTTCA
CAAAGCCTCTCACGTGCACTATGTAATTTCACAGAATGTAGACTGCTTGC
ATTTGCGCTCCGGTCTTCCCCGACAGGCCTTGTCGGAGCTGCATGGAAAC
CTTTTCATCGAGTGGTGCGCTCATTGCCGCCGCGAGGTTATTCTCGATTC
CCAAACCGAAACAGTGGGCATGAACCCTACATCCAGTATTTGCGACTGCG
GTCGCCCAATGACAGATAAGGCTCTGGACTGGGACGATGTGCTTCCAGAG
CCGGACTTTGAGCTTGCGAAAAAGCACAGTGCGGCAGCTGATTTCAACTT
GGTACTAGGCACCTCGTGTCAGATGGAGCCTGCCAGATCGTTGCACTTCC
GAGGCGCTGGCGGCAAGAAAAGTCGAGCAATCGTCAATCTCAGCCGTACT
GATTTTGATGACCGCTTCGGTATCTGTATCAGAGCTTATTGTGATACTGT
TTTCGCCATTATTGCTGTTGAGCTTGGCGTGCGGATTCCCCCGTTTGAAA
GACTTGTGAAACTAGTCTTAAGCGTTCGATGGGTAGATAGAGGCGTTCAT
TATCGGGTGACCTCGGCGAATGGGCTCGTCAAGTACGATATGCAGGTTCG
GCACAGGTGTGCCGATGGCGATAGCAAACAAAAAATGTGGTCAGACTATG
TATCGGAATTCCCACACAACGCCACCATTCCAACCACTGGTCGGCATATT
GAAGCGGAAGTTGAAACAAAAAAAGGAAAGCTTCGGCTTGAAGCAACAGC
TGAAAGACGGAAGCTCACGAAGGCTGAAGGTGAAATTGTGGTGGAGCAAA
AGGATTGGGAGGCCCGTGGAGCGGAAATTATTAAAGAATTGAACAACCGT
ATTCTAAATGATGGTAAAAGCCGCAAACCCCAGCAATCTGCAGACAGTAA
TGTATGGTTCGTCGCGGGCATGCGAAGAGGGTGGAGTGTTTGCTGTCTTT
GCAGAAAAGAAATATGGTGTGGCCAAAATCGGAGATATGAACACATGAAG
GCTTGTGCAGCATCGTTCAAACGATTTGAACGATAA

Coding sequence (CDS) from alignment at tig00000159_pilon:311051..312436-

>Gchil10504.t1 ID=Gchil10504.t1|Name=Gchil10504.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1386bp|location=Sequence derived from alignment at tig00000159_pilon:311051..312436- (Gracilaria chilensis NLEC103_M9 male)
ATGACCTCCGAACACGCCTACGCTGATCGTCTCTCCACTCACGGCTACAA
GGGAAAGCTCGATCTCCCACAACTGCCAGATCCCCCGCTCGCCGTCTTGC
ACAAGTCCCGATTTCTAGCCGATTGCATTCGCAATGCATCCCATGTCGTC
GTGCACACTGGCGCGGGAATATCCACTAGCGCGGGAATCAATGACTTTCG
CGGCCCAAACGGTGTCTGGACCACGCAGCGAAAACGAGCTAAACGCCCGC
GAACCTCCGTCATCGCTGAGACTGCACCGGATGCCCACTCTCATGTTACG
TTTGACAACGCTGTCCCTACTCTCACCCACATGGCACTTGTTGGTCTTCA
CAAAGCCTCTCACGTGCACTATGTAATTTCACAGAATGTAGACTGCTTGC
ATTTGCGCTCCGGTCTTCCCCGACAGGCCTTGTCGGAGCTGCATGGAAAC
CTTTTCATCGAGTGGTGCGCTCATTGCCGCCGCGAGGTTATTCTCGATTC
CCAAACCGAAACAGTGGGCATGAACCCTACATCCAGTATTTGCGACTGCG
GTCGCCCAATGACAGATAAGGCTCTGGACTGGGACGATGTGCTTCCAGAG
CCGGACTTTGAGCTTGCGAAAAAGCACAGTGCGGCAGCTGATTTCAACTT
GGTACTAGGCACCTCGTGTCAGATGGAGCCTGCCAGATCGTTGCACTTCC
GAGGCGCTGGCGGCAAGAAAAGTCGAGCAATCGTCAATCTCAGCCGTACT
GATTTTGATGACCGCTTCGGTATCTGTATCAGAGCTTATTGTGATACTGT
TTTCGCCATTATTGCTGTTGAGCTTGGCGTGCGGATTCCCCCGTTTGAAA
GACTTGTGAAACTAGTCTTAAGCGTTCGATGGGTAGATAGAGGCGTTCAT
TATCGGGTGACCTCGGCGAATGGGCTCGTCAAGTACGATATGCAGGTTCG
GCACAGGTGTGCCGATGGCGATAGCAAACAAAAAATGTGGTCAGACTATG
TATCGGAATTCCCACACAACGCCACCATTCCAACCACTGGTCGGCATATT
GAAGCGGAAGTTGAAACAAAAAAAGGAAAGCTTCGGCTTGAAGCAACAGC
TGAAAGACGGAAGCTCACGAAGGCTGAAGGTGAAATTGTGGTGGAGCAAA
AGGATTGGGAGGCCCGTGGAGCGGAAATTATTAAAGAATTGAACAACCGT
ATTCTAAATGATGGTAAAAGCCGCAAACCCCAGCAATCTGCAGACAGTAA
TGTATGGTTCGTCGCGGGCATGCGAAGAGGGTGGAGTGTTTGCTGTCTTT
GCAGAAAAGAAATATGGTGTGGCCAAAATCGGAGATATGAACACATGAAG
GCTTGTGCAGCATCGTTCAAACGATTTGAACGATAA