Gchil10253.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil10253.t1
Unique NameGchil10253.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length353
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000065_piloncontigtig00000065_pilon:110023..111081 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10253Gchil10253Gracilaria chilensis NLEC103_M9 malegenetig00000065_pilon 110023..111081 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10253.t1.stop1Gchil10253.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000065_pilon 110023..110025 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10253.t1.CDS1Gchil10253.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000065_pilon 110023..111081 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10253.t1.exon1Gchil10253.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000065_pilon 110023..111081 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10253.t1.start1Gchil10253.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000065_pilon 111079..111081 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10253.t1Gchil10253.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000065_pilon 110023..111081 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil10253.t1 ID=Gchil10253.t1|Name=Gchil10253.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=353bp
MSYSTAVSDISSVDGDREPRFKSLSQSQSQSREGKGHGTDASYYTPRKGS
LYHMDATCPMLVLKKMGRVHHSVPKGFEPCVLCETHVNTRSTFSDSSPAS
KEAKDTETPSKEVDQKPKPRTWLEKAQALSFGTKKQDSQADEKDNASPTR
VTSTACSRPVSTRDVEYVTTRTGRFYHQDPQCHNLRSAKKKIFVTRVRAD
LEACYLCVDDDAPIDTPTEVKSAGSTTERSITATNLSKPLITTRTGRFYH
SDSSCKNLRFAKKKIPVYEVPTNLEACYLCVESPLGSQTASEGASRGVAG
GTSSTPECGRYITTRTGRFYHLDYDCYNLRSAKAKFRKQTAPDGLLPCYK
CA*
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spliced messenger RNA

>Gchil10253.t1 ID=Gchil10253.t1|Name=Gchil10253.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1059bp|location=Sequence derived from alignment at tig00000065_pilon:110023..111081- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGTACTCCACTGCAGTTAGCGATATATCGTCTGTGGACGGTGACAG
AGAGCCCCGTTTCAAATCGCTCTCCCAATCTCAGTCCCAATCTCGTGAAG
GAAAGGGTCATGGCACGGACGCATCTTACTACACGCCTCGAAAGGGCAGC
CTGTACCACATGGACGCAACGTGCCCGATGCTAGTACTGAAGAAGATGGG
CCGAGTGCACCACTCAGTGCCGAAGGGTTTTGAGCCATGTGTGTTGTGCG
AAACACACGTGAATACACGCTCGACGTTTTCTGACTCGTCGCCCGCATCT
AAGGAAGCGAAAGATACCGAGACGCCGTCAAAAGAAGTAGATCAAAAACC
GAAGCCACGAACTTGGTTGGAAAAGGCGCAAGCGCTATCGTTCGGCACGA
AAAAGCAAGATTCGCAGGCAGACGAAAAGGACAATGCTTCCCCAACCCGG
GTCACCAGCACTGCATGTTCACGTCCGGTGAGCACACGCGATGTTGAATA
TGTCACGACTCGGACAGGTCGCTTCTATCATCAGGACCCTCAGTGCCATA
ACCTGCGCTCCGCGAAGAAGAAGATCTTCGTCACGCGTGTGCGGGCGGAT
TTGGAAGCATGCTACCTGTGTGTGGACGACGATGCGCCCATTGACACTCC
GACTGAGGTAAAGAGTGCAGGAAGCACCACGGAACGCTCGATCACGGCTA
CGAATCTTTCGAAACCTCTCATCACAACGCGCACGGGGAGGTTTTATCAT
AGCGATTCGAGTTGTAAAAACCTACGGTTTGCCAAGAAGAAGATACCTGT
GTACGAAGTACCAACGAATTTGGAGGCTTGTTACTTGTGCGTGGAGTCGC
CACTTGGTTCTCAGACTGCGTCGGAGGGAGCGTCACGCGGGGTGGCAGGA
GGAACGTCGTCCACGCCGGAGTGTGGCCGTTACATCACGACGCGCACAGG
GCGCTTTTATCACTTGGACTATGATTGCTACAATCTGCGATCCGCAAAGG
CCAAGTTTCGCAAACAGACGGCACCTGATGGACTCCTGCCGTGCTATAAG
TGCGCTTAG
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protein sequence of Gchil10253.t1

>Gchil10253.t1 ID=Gchil10253.t1|Name=Gchil10253.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=353bp
MSYSTAVSDISSVDGDREPRFKSLSQSQSQSREGKGHGTDASYYTPRKGS
LYHMDATCPMLVLKKMGRVHHSVPKGFEPCVLCETHVNTRSTFSDSSPAS
KEAKDTETPSKEVDQKPKPRTWLEKAQALSFGTKKQDSQADEKDNASPTR
VTSTACSRPVSTRDVEYVTTRTGRFYHQDPQCHNLRSAKKKIFVTRVRAD
LEACYLCVDDDAPIDTPTEVKSAGSTTERSITATNLSKPLITTRTGRFYH
SDSSCKNLRFAKKKIPVYEVPTNLEACYLCVESPLGSQTASEGASRGVAG
GTSSTPECGRYITTRTGRFYHLDYDCYNLRSAKAKFRKQTAPDGLLPCYK
CA*
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mRNA from alignment at tig00000065_pilon:110023..111081-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil10253.t1 ID=Gchil10253.t1|Name=Gchil10253.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1059bp|location=Sequence derived from alignment at tig00000065_pilon:110023..111081- (Gracilaria chilensis NLEC103_M9 male)
ATGTCGTACTCCACTGCAGTTAGCGATATATCGTCTGTGGACGGTGACAG
AGAGCCCCGTTTCAAATCGCTCTCCCAATCTCAGTCCCAATCTCGTGAAG
GAAAGGGTCATGGCACGGACGCATCTTACTACACGCCTCGAAAGGGCAGC
CTGTACCACATGGACGCAACGTGCCCGATGCTAGTACTGAAGAAGATGGG
CCGAGTGCACCACTCAGTGCCGAAGGGTTTTGAGCCATGTGTGTTGTGCG
AAACACACGTGAATACACGCTCGACGTTTTCTGACTCGTCGCCCGCATCT
AAGGAAGCGAAAGATACCGAGACGCCGTCAAAAGAAGTAGATCAAAAACC
GAAGCCACGAACTTGGTTGGAAAAGGCGCAAGCGCTATCGTTCGGCACGA
AAAAGCAAGATTCGCAGGCAGACGAAAAGGACAATGCTTCCCCAACCCGG
GTCACCAGCACTGCATGTTCACGTCCGGTGAGCACACGCGATGTTGAATA
TGTCACGACTCGGACAGGTCGCTTCTATCATCAGGACCCTCAGTGCCATA
ACCTGCGCTCCGCGAAGAAGAAGATCTTCGTCACGCGTGTGCGGGCGGAT
TTGGAAGCATGCTACCTGTGTGTGGACGACGATGCGCCCATTGACACTCC
GACTGAGGTAAAGAGTGCAGGAAGCACCACGGAACGCTCGATCACGGCTA
CGAATCTTTCGAAACCTCTCATCACAACGCGCACGGGGAGGTTTTATCAT
AGCGATTCGAGTTGTAAAAACCTACGGTTTGCCAAGAAGAAGATACCTGT
GTACGAAGTACCAACGAATTTGGAGGCTTGTTACTTGTGCGTGGAGTCGC
CACTTGGTTCTCAGACTGCGTCGGAGGGAGCGTCACGCGGGGTGGCAGGA
GGAACGTCGTCCACGCCGGAGTGTGGCCGTTACATCACGACGCGCACAGG
GCGCTTTTATCACTTGGACTATGATTGCTACAATCTGCGATCCGCAAAGG
CCAAGTTTCGCAAACAGACGGCACCTGATGGACTCCTGCCGTGCTATAAG
TGCGCTTAG
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Coding sequence (CDS) from alignment at tig00000065_pilon:110023..111081-

>Gchil10253.t1 ID=Gchil10253.t1|Name=Gchil10253.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1059bp|location=Sequence derived from alignment at tig00000065_pilon:110023..111081- (Gracilaria chilensis NLEC103_M9 male)
ATGTCGTACTCCACTGCAGTTAGCGATATATCGTCTGTGGACGGTGACAG
AGAGCCCCGTTTCAAATCGCTCTCCCAATCTCAGTCCCAATCTCGTGAAG
GAAAGGGTCATGGCACGGACGCATCTTACTACACGCCTCGAAAGGGCAGC
CTGTACCACATGGACGCAACGTGCCCGATGCTAGTACTGAAGAAGATGGG
CCGAGTGCACCACTCAGTGCCGAAGGGTTTTGAGCCATGTGTGTTGTGCG
AAACACACGTGAATACACGCTCGACGTTTTCTGACTCGTCGCCCGCATCT
AAGGAAGCGAAAGATACCGAGACGCCGTCAAAAGAAGTAGATCAAAAACC
GAAGCCACGAACTTGGTTGGAAAAGGCGCAAGCGCTATCGTTCGGCACGA
AAAAGCAAGATTCGCAGGCAGACGAAAAGGACAATGCTTCCCCAACCCGG
GTCACCAGCACTGCATGTTCACGTCCGGTGAGCACACGCGATGTTGAATA
TGTCACGACTCGGACAGGTCGCTTCTATCATCAGGACCCTCAGTGCCATA
ACCTGCGCTCCGCGAAGAAGAAGATCTTCGTCACGCGTGTGCGGGCGGAT
TTGGAAGCATGCTACCTGTGTGTGGACGACGATGCGCCCATTGACACTCC
GACTGAGGTAAAGAGTGCAGGAAGCACCACGGAACGCTCGATCACGGCTA
CGAATCTTTCGAAACCTCTCATCACAACGCGCACGGGGAGGTTTTATCAT
AGCGATTCGAGTTGTAAAAACCTACGGTTTGCCAAGAAGAAGATACCTGT
GTACGAAGTACCAACGAATTTGGAGGCTTGTTACTTGTGCGTGGAGTCGC
CACTTGGTTCTCAGACTGCGTCGGAGGGAGCGTCACGCGGGGTGGCAGGA
GGAACGTCGTCCACGCCGGAGTGTGGCCGTTACATCACGACGCGCACAGG
GCGCTTTTATCACTTGGACTATGATTGCTACAATCTGCGATCCGCAAAGG
CCAAGTTTCGCAAACAGACGGCACCTGATGGACTCCTGCCGTGCTATAAG
TGCGCTTAG
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