Gchil10152.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil10152.t1
Unique NameGchil10152.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length527
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004442_piloncontigtig00004442_pilon:1386432..1388012 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10152Gchil10152Gracilaria chilensis NLEC103_M9 malegenetig00004442_pilon 1386432..1388012 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10152.t1.stop1Gchil10152.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004442_pilon 1386432..1386434 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10152.t1.CDS1Gchil10152.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004442_pilon 1386432..1388012 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10152.t1.exon1Gchil10152.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004442_pilon 1386432..1388012 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10152.t1.start1Gchil10152.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004442_pilon 1388010..1388012 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10152.t1Gchil10152.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004442_pilon 1386432..1388012 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil10152.t1 ID=Gchil10152.t1|Name=Gchil10152.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=527bp
MFPFLADDVLCGALLPGPERDTPDKPGVNLAILCKGHPCDLKEPANLDLW
AQPRQPPGSYLSDYVSPPSTAVSSQHPHRRKSWRSAIALEVKHNFHSAIE
MFVVTIITSLLLVFPSLVISQLVLESGSQLSLLQYGSAQSTQTFLLSVSA
DETLTAVTLISQNSEVLTSHDILFSEVSPGLYNISVNLFFDGQPGEVNYS
VEAITLSANGAENRPRVATMHSVYGVVFYEVINGDRKMISGDESEGIEYT
SFTTRESAPRVFQAVAHAPPGISLKGKPFIRSARGTGENPLLLESGVEVS
GNEMSLSLSPYRTGSVVVTIEFADLEINGELYETVVRISVPDVPSPPVVI
SQKGELVAEVSPNGTAEFKLDVYNAADFPAMKAVIGDSVFKATREGSEFF
DFDQKVRFVGSIDEGIFPLKIRVTRDGEAASDAVLFDNDLSVEFVRSSAD
KVLGNGSPVGVGTNVGLIAGLSVLGLALLAVAVGGVLAIFSSRRREEAQA
QAESLEAPEDIGGFGIARDVYGRGSV*
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spliced messenger RNA

>Gchil10152.t1 ID=Gchil10152.t1|Name=Gchil10152.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1581bp|location=Sequence derived from alignment at tig00004442_pilon:1386432..1388012- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTTCCTTTTCTAGCAGACGATGTCCTTTGTGGTGCGTTGCTCCCGGG
CCCCGAAAGAGATACACCGGACAAGCCTGGGGTGAACCTCGCCATTCTTT
GCAAGGGACACCCCTGCGATCTGAAAGAGCCAGCGAACCTGGATCTTTGG
GCGCAACCCAGACAGCCTCCAGGTTCGTACTTAAGCGATTATGTTTCCCC
CCCCTCCACCGCAGTGTCTTCTCAACATCCTCACCGTCGGAAATCGTGGA
GGTCCGCAATAGCCCTTGAAGTGAAGCATAATTTCCATAGCGCGATCGAA
ATGTTCGTCGTGACTATCATTACATCTCTCCTTTTAGTGTTTCCTTCATT
GGTTATTTCTCAACTGGTCTTGGAATCAGGTTCGCAACTGAGTTTGTTAC
AGTACGGATCTGCTCAATCAACACAAACATTCCTCCTGTCCGTATCAGCC
GATGAAACCTTAACAGCAGTAACTCTTATTTCTCAAAATAGCGAAGTTCT
CACATCGCACGACATTTTGTTCTCTGAAGTATCTCCGGGTCTATACAATA
TTTCGGTGAATCTATTCTTCGACGGACAACCTGGAGAAGTGAACTACTCT
GTCGAAGCAATAACTCTCTCGGCCAATGGCGCAGAAAATCGCCCTCGGGT
TGCCACAATGCATTCGGTGTACGGGGTGGTTTTCTACGAAGTGATTAATG
GCGACCGCAAAATGATTTCAGGTGATGAGAGTGAGGGGATTGAATACACT
TCCTTCACAACTCGGGAATCTGCTCCGCGGGTGTTCCAGGCTGTTGCGCA
CGCACCGCCCGGTATTAGTCTGAAAGGAAAGCCTTTCATTCGCTCGGCAC
GTGGAACTGGAGAAAACCCGCTTCTGCTGGAATCGGGTGTTGAAGTTTCC
GGGAATGAAATGTCCTTGTCGTTGAGTCCGTATCGGACTGGAAGTGTCGT
TGTTACGATTGAGTTTGCAGATCTGGAGATCAATGGCGAATTGTATGAGA
CGGTAGTGCGGATCTCTGTGCCAGATGTTCCTTCCCCACCAGTGGTAATT
TCGCAGAAAGGGGAGCTCGTTGCGGAAGTTTCACCCAACGGGACTGCGGA
ATTCAAGTTGGATGTGTATAATGCAGCGGACTTCCCCGCGATGAAGGCGG
TGATTGGAGACAGTGTGTTTAAAGCGACCCGTGAGGGTTCGGAGTTTTTT
GACTTCGATCAAAAGGTGCGCTTCGTCGGATCAATCGATGAGGGTATTTT
CCCATTGAAAATCCGTGTCACAAGAGATGGAGAAGCGGCATCGGATGCGG
TGTTGTTTGATAATGACCTCTCAGTAGAGTTTGTAAGGTCTAGCGCAGAC
AAGGTTCTGGGTAACGGTAGCCCAGTTGGAGTTGGAACGAATGTGGGACT
AATAGCTGGACTGTCGGTTCTTGGCTTGGCCCTTCTTGCTGTGGCAGTTG
GTGGCGTTTTGGCCATCTTCAGCTCCCGCAGACGCGAAGAAGCACAAGCA
CAAGCTGAGTCACTCGAAGCACCAGAAGACATAGGAGGATTTGGCATTGC
TCGAGATGTGTATGGCCGTGGAAGCGTGTAG
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protein sequence of Gchil10152.t1

>Gchil10152.t1 ID=Gchil10152.t1|Name=Gchil10152.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=527bp
MFPFLADDVLCGALLPGPERDTPDKPGVNLAILCKGHPCDLKEPANLDLW
AQPRQPPGSYLSDYVSPPSTAVSSQHPHRRKSWRSAIALEVKHNFHSAIE
MFVVTIITSLLLVFPSLVISQLVLESGSQLSLLQYGSAQSTQTFLLSVSA
DETLTAVTLISQNSEVLTSHDILFSEVSPGLYNISVNLFFDGQPGEVNYS
VEAITLSANGAENRPRVATMHSVYGVVFYEVINGDRKMISGDESEGIEYT
SFTTRESAPRVFQAVAHAPPGISLKGKPFIRSARGTGENPLLLESGVEVS
GNEMSLSLSPYRTGSVVVTIEFADLEINGELYETVVRISVPDVPSPPVVI
SQKGELVAEVSPNGTAEFKLDVYNAADFPAMKAVIGDSVFKATREGSEFF
DFDQKVRFVGSIDEGIFPLKIRVTRDGEAASDAVLFDNDLSVEFVRSSAD
KVLGNGSPVGVGTNVGLIAGLSVLGLALLAVAVGGVLAIFSSRRREEAQA
QAESLEAPEDIGGFGIARDVYGRGSV*
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mRNA from alignment at tig00004442_pilon:1386432..1388012-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil10152.t1 ID=Gchil10152.t1|Name=Gchil10152.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1581bp|location=Sequence derived from alignment at tig00004442_pilon:1386432..1388012- (Gracilaria chilensis NLEC103_M9 male)
ATGTTTCCTTTTCTAGCAGACGATGTCCTTTGTGGTGCGTTGCTCCCGGG
CCCCGAAAGAGATACACCGGACAAGCCTGGGGTGAACCTCGCCATTCTTT
GCAAGGGACACCCCTGCGATCTGAAAGAGCCAGCGAACCTGGATCTTTGG
GCGCAACCCAGACAGCCTCCAGGTTCGTACTTAAGCGATTATGTTTCCCC
CCCCTCCACCGCAGTGTCTTCTCAACATCCTCACCGTCGGAAATCGTGGA
GGTCCGCAATAGCCCTTGAAGTGAAGCATAATTTCCATAGCGCGATCGAA
ATGTTCGTCGTGACTATCATTACATCTCTCCTTTTAGTGTTTCCTTCATT
GGTTATTTCTCAACTGGTCTTGGAATCAGGTTCGCAACTGAGTTTGTTAC
AGTACGGATCTGCTCAATCAACACAAACATTCCTCCTGTCCGTATCAGCC
GATGAAACCTTAACAGCAGTAACTCTTATTTCTCAAAATAGCGAAGTTCT
CACATCGCACGACATTTTGTTCTCTGAAGTATCTCCGGGTCTATACAATA
TTTCGGTGAATCTATTCTTCGACGGACAACCTGGAGAAGTGAACTACTCT
GTCGAAGCAATAACTCTCTCGGCCAATGGCGCAGAAAATCGCCCTCGGGT
TGCCACAATGCATTCGGTGTACGGGGTGGTTTTCTACGAAGTGATTAATG
GCGACCGCAAAATGATTTCAGGTGATGAGAGTGAGGGGATTGAATACACT
TCCTTCACAACTCGGGAATCTGCTCCGCGGGTGTTCCAGGCTGTTGCGCA
CGCACCGCCCGGTATTAGTCTGAAAGGAAAGCCTTTCATTCGCTCGGCAC
GTGGAACTGGAGAAAACCCGCTTCTGCTGGAATCGGGTGTTGAAGTTTCC
GGGAATGAAATGTCCTTGTCGTTGAGTCCGTATCGGACTGGAAGTGTCGT
TGTTACGATTGAGTTTGCAGATCTGGAGATCAATGGCGAATTGTATGAGA
CGGTAGTGCGGATCTCTGTGCCAGATGTTCCTTCCCCACCAGTGGTAATT
TCGCAGAAAGGGGAGCTCGTTGCGGAAGTTTCACCCAACGGGACTGCGGA
ATTCAAGTTGGATGTGTATAATGCAGCGGACTTCCCCGCGATGAAGGCGG
TGATTGGAGACAGTGTGTTTAAAGCGACCCGTGAGGGTTCGGAGTTTTTT
GACTTCGATCAAAAGGTGCGCTTCGTCGGATCAATCGATGAGGGTATTTT
CCCATTGAAAATCCGTGTCACAAGAGATGGAGAAGCGGCATCGGATGCGG
TGTTGTTTGATAATGACCTCTCAGTAGAGTTTGTAAGGTCTAGCGCAGAC
AAGGTTCTGGGTAACGGTAGCCCAGTTGGAGTTGGAACGAATGTGGGACT
AATAGCTGGACTGTCGGTTCTTGGCTTGGCCCTTCTTGCTGTGGCAGTTG
GTGGCGTTTTGGCCATCTTCAGCTCCCGCAGACGCGAAGAAGCACAAGCA
CAAGCTGAGTCACTCGAAGCACCAGAAGACATAGGAGGATTTGGCATTGC
TCGAGATGTGTATGGCCGTGGAAGCGTGTAG
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Coding sequence (CDS) from alignment at tig00004442_pilon:1386432..1388012-

>Gchil10152.t1 ID=Gchil10152.t1|Name=Gchil10152.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1581bp|location=Sequence derived from alignment at tig00004442_pilon:1386432..1388012- (Gracilaria chilensis NLEC103_M9 male)
ATGTTTCCTTTTCTAGCAGACGATGTCCTTTGTGGTGCGTTGCTCCCGGG
CCCCGAAAGAGATACACCGGACAAGCCTGGGGTGAACCTCGCCATTCTTT
GCAAGGGACACCCCTGCGATCTGAAAGAGCCAGCGAACCTGGATCTTTGG
GCGCAACCCAGACAGCCTCCAGGTTCGTACTTAAGCGATTATGTTTCCCC
CCCCTCCACCGCAGTGTCTTCTCAACATCCTCACCGTCGGAAATCGTGGA
GGTCCGCAATAGCCCTTGAAGTGAAGCATAATTTCCATAGCGCGATCGAA
ATGTTCGTCGTGACTATCATTACATCTCTCCTTTTAGTGTTTCCTTCATT
GGTTATTTCTCAACTGGTCTTGGAATCAGGTTCGCAACTGAGTTTGTTAC
AGTACGGATCTGCTCAATCAACACAAACATTCCTCCTGTCCGTATCAGCC
GATGAAACCTTAACAGCAGTAACTCTTATTTCTCAAAATAGCGAAGTTCT
CACATCGCACGACATTTTGTTCTCTGAAGTATCTCCGGGTCTATACAATA
TTTCGGTGAATCTATTCTTCGACGGACAACCTGGAGAAGTGAACTACTCT
GTCGAAGCAATAACTCTCTCGGCCAATGGCGCAGAAAATCGCCCTCGGGT
TGCCACAATGCATTCGGTGTACGGGGTGGTTTTCTACGAAGTGATTAATG
GCGACCGCAAAATGATTTCAGGTGATGAGAGTGAGGGGATTGAATACACT
TCCTTCACAACTCGGGAATCTGCTCCGCGGGTGTTCCAGGCTGTTGCGCA
CGCACCGCCCGGTATTAGTCTGAAAGGAAAGCCTTTCATTCGCTCGGCAC
GTGGAACTGGAGAAAACCCGCTTCTGCTGGAATCGGGTGTTGAAGTTTCC
GGGAATGAAATGTCCTTGTCGTTGAGTCCGTATCGGACTGGAAGTGTCGT
TGTTACGATTGAGTTTGCAGATCTGGAGATCAATGGCGAATTGTATGAGA
CGGTAGTGCGGATCTCTGTGCCAGATGTTCCTTCCCCACCAGTGGTAATT
TCGCAGAAAGGGGAGCTCGTTGCGGAAGTTTCACCCAACGGGACTGCGGA
ATTCAAGTTGGATGTGTATAATGCAGCGGACTTCCCCGCGATGAAGGCGG
TGATTGGAGACAGTGTGTTTAAAGCGACCCGTGAGGGTTCGGAGTTTTTT
GACTTCGATCAAAAGGTGCGCTTCGTCGGATCAATCGATGAGGGTATTTT
CCCATTGAAAATCCGTGTCACAAGAGATGGAGAAGCGGCATCGGATGCGG
TGTTGTTTGATAATGACCTCTCAGTAGAGTTTGTAAGGTCTAGCGCAGAC
AAGGTTCTGGGTAACGGTAGCCCAGTTGGAGTTGGAACGAATGTGGGACT
AATAGCTGGACTGTCGGTTCTTGGCTTGGCCCTTCTTGCTGTGGCAGTTG
GTGGCGTTTTGGCCATCTTCAGCTCCCGCAGACGCGAAGAAGCACAAGCA
CAAGCTGAGTCACTCGAAGCACCAGAAGACATAGGAGGATTTGGCATTGC
TCGAGATGTGTATGGCCGTGGAAGCGTGTAG
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