Gchil10133.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil10133.t1
Unique NameGchil10133.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length496
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004442_piloncontigtig00004442_pilon:1208825..1210312 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10133Gchil10133Gracilaria chilensis NLEC103_M9 malegenetig00004442_pilon 1208825..1210312 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10133.t1.start1Gchil10133.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004442_pilon 1208825..1208827 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10133.t1.CDS1Gchil10133.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004442_pilon 1208825..1210312 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10133.t1.exon1Gchil10133.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004442_pilon 1208825..1210312 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10133.t1.stop1Gchil10133.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004442_pilon 1210310..1210312 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10133.t1Gchil10133.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004442_pilon 1208825..1210312 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil10133.t1 ID=Gchil10133.t1|Name=Gchil10133.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=496bp
MPPPRQEQTPREKAEMYERNIKRFTHKGSMVELALLLVDGADGVPRDSRR
AVQLLERAATYRFPRAMFELAMLYDFGHGDIPPNPKRAQELYENAMRLWK
NGSATNNLAYLFERGTKQVPRNIRRAVQLYERAIKQHDNVVSMYNLAGLL
WSGDYGTPVDAPRALKLFKNAIREADDVESMVDLASALFEGGLGVPSDPK
RAVKWYRKASDLNSIDAKEALAAILEVGADKVPADPCQAVKLYEDVLERT
KSSSAMVNLGNLLLRGRGDVSRNPTRALQLFEQAAKQDDAIDARIQLASL
LTKGTAEIPANAPRAVQLYEGVIEEKADNRALTNLAVLLELGAEGVPADQ
TRAIELYERAVEKKYPPAVFNLAMILKDGSESTPKDEAKAVKLLETACKE
FLAFKAGTSAMVELAKMLQRGTSCSPPNPKRAVRFYKRAIERGNDEAKRC
LAALLAKGAKGVKADVTLAIKLYTESVETTGHPDAIKAISRLVGD*
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spliced messenger RNA

>Gchil10133.t1 ID=Gchil10133.t1|Name=Gchil10133.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1488bp|location=Sequence derived from alignment at tig00004442_pilon:1208825..1210312+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGCCACCGCGACAAGAGCAAACACCGCGGGAAAAGGCCGAGATGTA
TGAGCGAAACATCAAGCGATTCACCCACAAGGGGTCCATGGTAGAGCTCG
CGCTTCTGCTGGTTGATGGTGCAGACGGCGTGCCACGAGATTCTCGACGC
GCAGTACAGCTTCTCGAACGCGCTGCGACGTACCGCTTTCCGCGCGCTAT
GTTCGAACTGGCCATGTTGTATGACTTTGGACACGGCGACATCCCACCCA
ATCCGAAGCGGGCACAAGAGCTCTATGAGAATGCCATGCGACTGTGGAAG
AATGGAAGCGCTACTAACAATCTTGCGTACCTGTTTGAGAGGGGTACGAA
ACAGGTTCCTCGTAACATACGCCGAGCCGTTCAGCTTTATGAAAGAGCAA
TTAAACAACATGACAACGTGGTTTCTATGTACAATCTTGCCGGTTTGTTA
TGGTCTGGAGATTATGGAACGCCCGTTGACGCGCCTCGTGCTCTCAAGCT
GTTCAAGAATGCAATCCGCGAAGCGGACGACGTAGAGTCAATGGTGGACC
TGGCAAGCGCGCTGTTCGAGGGTGGCTTGGGAGTTCCATCCGATCCGAAG
CGTGCCGTGAAATGGTATAGAAAGGCAAGTGACTTGAACAGTATTGACGC
TAAAGAAGCCCTTGCTGCCATTCTGGAAGTAGGGGCGGACAAAGTACCAG
CCGACCCGTGCCAGGCCGTGAAGTTATACGAGGATGTGTTGGAGAGAACC
AAATCTAGTAGTGCAATGGTAAATTTGGGTAACTTGCTTCTACGAGGCAG
AGGCGATGTTTCTCGAAATCCCACCAGGGCGTTACAGCTGTTCGAACAGG
CTGCCAAACAAGATGATGCTATAGACGCGAGGATTCAACTAGCATCACTG
CTCACGAAAGGTACAGCAGAAATTCCCGCAAACGCGCCGCGAGCTGTGCA
ATTGTACGAAGGCGTCATCGAGGAGAAGGCTGATAATCGGGCGTTGACAA
ATCTAGCTGTCCTATTGGAATTAGGCGCGGAAGGCGTGCCGGCTGATCAA
ACGCGCGCGATAGAGCTGTACGAAAGAGCCGTTGAGAAGAAGTATCCTCC
AGCTGTGTTTAATTTGGCAATGATACTTAAGGACGGAAGCGAGTCCACAC
CCAAGGATGAAGCCAAGGCCGTCAAATTGTTGGAAACAGCCTGCAAAGAG
TTCCTGGCTTTCAAGGCAGGCACTTCCGCCATGGTCGAACTCGCGAAAAT
GCTGCAGAGAGGAACCAGTTGTAGTCCGCCTAATCCGAAACGTGCTGTCA
GATTCTACAAGAGGGCGATAGAACGCGGTAATGATGAAGCGAAAAGATGC
TTGGCGGCATTGCTAGCGAAAGGTGCGAAGGGAGTGAAGGCTGACGTCAC
TTTGGCCATCAAGTTGTACACCGAATCTGTAGAGACGACAGGGCATCCAG
ACGCGATTAAAGCGATATCGAGGCTTGTTGGTGATTAG
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protein sequence of Gchil10133.t1

>Gchil10133.t1 ID=Gchil10133.t1|Name=Gchil10133.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=496bp
MPPPRQEQTPREKAEMYERNIKRFTHKGSMVELALLLVDGADGVPRDSRR
AVQLLERAATYRFPRAMFELAMLYDFGHGDIPPNPKRAQELYENAMRLWK
NGSATNNLAYLFERGTKQVPRNIRRAVQLYERAIKQHDNVVSMYNLAGLL
WSGDYGTPVDAPRALKLFKNAIREADDVESMVDLASALFEGGLGVPSDPK
RAVKWYRKASDLNSIDAKEALAAILEVGADKVPADPCQAVKLYEDVLERT
KSSSAMVNLGNLLLRGRGDVSRNPTRALQLFEQAAKQDDAIDARIQLASL
LTKGTAEIPANAPRAVQLYEGVIEEKADNRALTNLAVLLELGAEGVPADQ
TRAIELYERAVEKKYPPAVFNLAMILKDGSESTPKDEAKAVKLLETACKE
FLAFKAGTSAMVELAKMLQRGTSCSPPNPKRAVRFYKRAIERGNDEAKRC
LAALLAKGAKGVKADVTLAIKLYTESVETTGHPDAIKAISRLVGD*
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mRNA from alignment at tig00004442_pilon:1208825..1210312+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil10133.t1 ID=Gchil10133.t1|Name=Gchil10133.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1488bp|location=Sequence derived from alignment at tig00004442_pilon:1208825..1210312+ (Gracilaria chilensis NLEC103_M9 male)
ATGCCGCCACCGCGACAAGAGCAAACACCGCGGGAAAAGGCCGAGATGTA
TGAGCGAAACATCAAGCGATTCACCCACAAGGGGTCCATGGTAGAGCTCG
CGCTTCTGCTGGTTGATGGTGCAGACGGCGTGCCACGAGATTCTCGACGC
GCAGTACAGCTTCTCGAACGCGCTGCGACGTACCGCTTTCCGCGCGCTAT
GTTCGAACTGGCCATGTTGTATGACTTTGGACACGGCGACATCCCACCCA
ATCCGAAGCGGGCACAAGAGCTCTATGAGAATGCCATGCGACTGTGGAAG
AATGGAAGCGCTACTAACAATCTTGCGTACCTGTTTGAGAGGGGTACGAA
ACAGGTTCCTCGTAACATACGCCGAGCCGTTCAGCTTTATGAAAGAGCAA
TTAAACAACATGACAACGTGGTTTCTATGTACAATCTTGCCGGTTTGTTA
TGGTCTGGAGATTATGGAACGCCCGTTGACGCGCCTCGTGCTCTCAAGCT
GTTCAAGAATGCAATCCGCGAAGCGGACGACGTAGAGTCAATGGTGGACC
TGGCAAGCGCGCTGTTCGAGGGTGGCTTGGGAGTTCCATCCGATCCGAAG
CGTGCCGTGAAATGGTATAGAAAGGCAAGTGACTTGAACAGTATTGACGC
TAAAGAAGCCCTTGCTGCCATTCTGGAAGTAGGGGCGGACAAAGTACCAG
CCGACCCGTGCCAGGCCGTGAAGTTATACGAGGATGTGTTGGAGAGAACC
AAATCTAGTAGTGCAATGGTAAATTTGGGTAACTTGCTTCTACGAGGCAG
AGGCGATGTTTCTCGAAATCCCACCAGGGCGTTACAGCTGTTCGAACAGG
CTGCCAAACAAGATGATGCTATAGACGCGAGGATTCAACTAGCATCACTG
CTCACGAAAGGTACAGCAGAAATTCCCGCAAACGCGCCGCGAGCTGTGCA
ATTGTACGAAGGCGTCATCGAGGAGAAGGCTGATAATCGGGCGTTGACAA
ATCTAGCTGTCCTATTGGAATTAGGCGCGGAAGGCGTGCCGGCTGATCAA
ACGCGCGCGATAGAGCTGTACGAAAGAGCCGTTGAGAAGAAGTATCCTCC
AGCTGTGTTTAATTTGGCAATGATACTTAAGGACGGAAGCGAGTCCACAC
CCAAGGATGAAGCCAAGGCCGTCAAATTGTTGGAAACAGCCTGCAAAGAG
TTCCTGGCTTTCAAGGCAGGCACTTCCGCCATGGTCGAACTCGCGAAAAT
GCTGCAGAGAGGAACCAGTTGTAGTCCGCCTAATCCGAAACGTGCTGTCA
GATTCTACAAGAGGGCGATAGAACGCGGTAATGATGAAGCGAAAAGATGC
TTGGCGGCATTGCTAGCGAAAGGTGCGAAGGGAGTGAAGGCTGACGTCAC
TTTGGCCATCAAGTTGTACACCGAATCTGTAGAGACGACAGGGCATCCAG
ACGCGATTAAAGCGATATCGAGGCTTGTTGGTGATTAG
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Coding sequence (CDS) from alignment at tig00004442_pilon:1208825..1210312+

>Gchil10133.t1 ID=Gchil10133.t1|Name=Gchil10133.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1488bp|location=Sequence derived from alignment at tig00004442_pilon:1208825..1210312+ (Gracilaria chilensis NLEC103_M9 male)
ATGCCGCCACCGCGACAAGAGCAAACACCGCGGGAAAAGGCCGAGATGTA
TGAGCGAAACATCAAGCGATTCACCCACAAGGGGTCCATGGTAGAGCTCG
CGCTTCTGCTGGTTGATGGTGCAGACGGCGTGCCACGAGATTCTCGACGC
GCAGTACAGCTTCTCGAACGCGCTGCGACGTACCGCTTTCCGCGCGCTAT
GTTCGAACTGGCCATGTTGTATGACTTTGGACACGGCGACATCCCACCCA
ATCCGAAGCGGGCACAAGAGCTCTATGAGAATGCCATGCGACTGTGGAAG
AATGGAAGCGCTACTAACAATCTTGCGTACCTGTTTGAGAGGGGTACGAA
ACAGGTTCCTCGTAACATACGCCGAGCCGTTCAGCTTTATGAAAGAGCAA
TTAAACAACATGACAACGTGGTTTCTATGTACAATCTTGCCGGTTTGTTA
TGGTCTGGAGATTATGGAACGCCCGTTGACGCGCCTCGTGCTCTCAAGCT
GTTCAAGAATGCAATCCGCGAAGCGGACGACGTAGAGTCAATGGTGGACC
TGGCAAGCGCGCTGTTCGAGGGTGGCTTGGGAGTTCCATCCGATCCGAAG
CGTGCCGTGAAATGGTATAGAAAGGCAAGTGACTTGAACAGTATTGACGC
TAAAGAAGCCCTTGCTGCCATTCTGGAAGTAGGGGCGGACAAAGTACCAG
CCGACCCGTGCCAGGCCGTGAAGTTATACGAGGATGTGTTGGAGAGAACC
AAATCTAGTAGTGCAATGGTAAATTTGGGTAACTTGCTTCTACGAGGCAG
AGGCGATGTTTCTCGAAATCCCACCAGGGCGTTACAGCTGTTCGAACAGG
CTGCCAAACAAGATGATGCTATAGACGCGAGGATTCAACTAGCATCACTG
CTCACGAAAGGTACAGCAGAAATTCCCGCAAACGCGCCGCGAGCTGTGCA
ATTGTACGAAGGCGTCATCGAGGAGAAGGCTGATAATCGGGCGTTGACAA
ATCTAGCTGTCCTATTGGAATTAGGCGCGGAAGGCGTGCCGGCTGATCAA
ACGCGCGCGATAGAGCTGTACGAAAGAGCCGTTGAGAAGAAGTATCCTCC
AGCTGTGTTTAATTTGGCAATGATACTTAAGGACGGAAGCGAGTCCACAC
CCAAGGATGAAGCCAAGGCCGTCAAATTGTTGGAAACAGCCTGCAAAGAG
TTCCTGGCTTTCAAGGCAGGCACTTCCGCCATGGTCGAACTCGCGAAAAT
GCTGCAGAGAGGAACCAGTTGTAGTCCGCCTAATCCGAAACGTGCTGTCA
GATTCTACAAGAGGGCGATAGAACGCGGTAATGATGAAGCGAAAAGATGC
TTGGCGGCATTGCTAGCGAAAGGTGCGAAGGGAGTGAAGGCTGACGTCAC
TTTGGCCATCAAGTTGTACACCGAATCTGTAGAGACGACAGGGCATCCAG
ACGCGATTAAAGCGATATCGAGGCTTGTTGGTGATTAG
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