Gchil10106.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gchil10106.t1
Unique Name	Gchil10106.t1
Type	mRNA
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	569

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004442_pilon	contig	tig00004442_pilon:936824..938530 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	130081.XP_005704795.1
Preferred name	G6PD4
PFAMs	G6PD_C,G6PD_N
Max annot lvl	2759\|Eukaryota
KEGG rclass	RC00001,RC00066
KEGG ko	ko:K00036,ko:K17279
KEGG Reaction	R00835,R02736,R10907
KEGG Pathway	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230
KEGG Module	M00004,M00006,M00008
GOs	GO:0003674,GO:0003824,GO:0004345,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0006006,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019318,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564
Evalue	6.24e-229
EggNOG OGs	COG0364@1\|root,KOG0563@2759\|Eukaryota
EC	1.1.1.363,1.1.1.49
Description	glucose-6-phosphate dehydrogenase activity
COG category	G
BRITE	ko00000,ko00001,ko00002,ko01000,ko04147

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil10106	Gchil10106	Gracilaria chilensis NLEC103_M9 male	gene	tig00004442_pilon 936824..938530 +

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil10106.t1.start1	Gchil10106.t1.start1	Gracilaria chilensis NLEC103_M9 male	start_codon	tig00004442_pilon 936824..936826 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil10106.t1.CDS1	Gchil10106.t1.CDS1	Gracilaria chilensis NLEC103_M9 male	CDS	tig00004442_pilon 936824..938530 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil10106.t1.exon1	Gchil10106.t1.exon1	Gracilaria chilensis NLEC103_M9 male	exon	tig00004442_pilon 936824..938530 +

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil10106.t1.stop1	Gchil10106.t1.stop1	Gracilaria chilensis NLEC103_M9 male	stop_codon	tig00004442_pilon 938528..938530 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gchil10106.t1	Gchil10106.t1	Gracilaria chilensis NLEC103_M9 male	polypeptide	tig00004442_pilon 936824..938530 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00004442_pilon:936824..938530+
coding sequence from alignment at tig00004442_pilon:936824..938530+

mRNA sequence

>Gchil10106.t1 ID=Gchil10106.t1|Name=Gchil10106.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=569bp
MAFITPQPTGSFLPNRPAFVFKSSEKSVNPILVPRVPRMVALPDTPNTPP
ETILSANPLHSFAKDPTDHGLALMDSVHLRNAKVRGEPVVIVVLGASGDL
AKKKTFPAIFSLYYHGLLPTDFVLYGFSRSAMSNDEFRELIYDTLSCRVI
DGERCQERMDLFLPKCFYHKGNYYDADSFGALDDVLQNGFEQKHPKTNRL
YYLAIPPKVFNASCSNINSSGRAASGWTRVVVEKPFGHDLSSYRDLRSNL
ASVLSEEETFRIDHFLAKELVQNLMTLRFANAIFEPLWNRYHVKSVQITF
KEHFGVEGRAGYFDQVGIIRDIMQNHLLQMLALLAMEPPVSLCAEDIRDE
KVKVLRAIEPLSAEDFATGQYAARDSLSTGYLEDDGVPPDSLTPTFASCV
LHINNARWDGVPFLMRAGKALDERKTEIRIQFKHVPGALFPVTDGAEHNE
LVIRVQPDEAIYMRIVSKVPGLTSRMEEARLNLFYRHAWEESKDIPDAYE
RLILDVIQGEKSLFIRDDELEAAWTIFTPALDELEGSRAPKPELYQYGST
GPEASDRLAGKYNVQWSN*

spliced messenger RNA

>Gchil10106.t1 ID=Gchil10106.t1|Name=Gchil10106.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1707bp|location=Sequence derived from alignment at tig00004442_pilon:936824..938530+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCATTCATTACCCCTCAGCCGACTGGCTCCTTTTTGCCCAATCGACC
TGCTTTCGTTTTCAAATCTTCTGAGAAATCCGTCAATCCAATTCTTGTTC
CGCGGGTACCACGAATGGTGGCTCTTCCGGACACCCCAAACACACCTCCA
GAAACCATTCTTTCAGCAAATCCGCTACATAGTTTCGCTAAAGACCCCAC
GGATCATGGTCTTGCTCTCATGGATTCTGTGCATCTCCGCAATGCAAAGG
TTCGCGGCGAGCCCGTGGTCATCGTCGTTCTCGGTGCTTCTGGAGATCTG
GCGAAGAAGAAGACTTTTCCTGCTATTTTCAGTTTATATTATCACGGCTT
GCTGCCCACCGATTTCGTTCTGTACGGTTTCTCGAGAAGTGCCATGTCTA
ACGATGAATTTCGCGAGCTTATCTACGATACACTCAGTTGCAGAGTTATC
GATGGTGAGAGATGTCAGGAGAGGATGGATTTGTTCTTGCCCAAGTGCTT
TTATCACAAAGGCAATTATTACGATGCAGACTCCTTCGGAGCATTGGATG
ATGTTCTACAGAATGGCTTTGAACAAAAGCACCCAAAAACCAACAGGCTG
TACTATTTAGCCATCCCGCCAAAGGTGTTCAATGCCAGCTGTTCCAACAT
CAACAGCAGCGGCCGTGCTGCAAGTGGGTGGACTCGAGTCGTTGTTGAGA
AACCGTTCGGGCATGATCTCTCTTCGTATAGAGACCTTCGCTCTAATTTG
GCTTCCGTACTGTCCGAGGAGGAAACTTTTCGCATTGATCATTTTCTTGC
GAAAGAGCTAGTGCAAAATCTCATGACTCTGAGATTTGCAAATGCCATTT
TCGAACCTTTATGGAACCGCTATCATGTCAAGAGCGTCCAGATTACTTTC
AAGGAACATTTCGGTGTGGAAGGACGTGCCGGATATTTTGATCAAGTGGG
TATTATCAGAGATATAATGCAAAACCATCTTTTGCAAATGCTTGCCCTGT
TGGCAATGGAGCCCCCAGTCAGTTTGTGTGCGGAAGATATTCGGGATGAA
AAGGTGAAGGTGTTACGAGCGATCGAGCCGTTATCTGCTGAAGACTTTGC
AACAGGTCAATATGCGGCGAGGGATTCTTTATCTACTGGCTACCTGGAGG
ATGACGGTGTCCCTCCAGATTCTCTCACTCCCACTTTCGCATCTTGCGTG
TTGCATATTAACAATGCCCGATGGGATGGGGTGCCCTTTTTGATGCGAGC
AGGAAAGGCGTTGGACGAAAGGAAAACGGAGATTCGCATTCAATTTAAGC
ACGTACCAGGCGCCTTGTTCCCCGTTACTGATGGTGCTGAACACAACGAG
TTAGTTATTCGGGTGCAACCGGATGAAGCAATATACATGAGGATTGTATC
AAAGGTGCCTGGTCTCACATCGAGAATGGAAGAGGCAAGATTGAATCTCT
TCTATCGTCACGCGTGGGAAGAATCGAAAGATATTCCAGATGCATATGAG
CGATTAATATTGGATGTTATTCAAGGGGAGAAGTCACTGTTCATCCGTGA
TGACGAACTAGAGGCTGCTTGGACAATCTTCACACCTGCTCTTGACGAGC
TCGAGGGATCTCGTGCTCCGAAACCAGAGCTTTACCAATATGGAAGCACT
GGACCAGAGGCTAGTGATAGACTCGCTGGGAAGTACAATGTACAATGGTC
GAACTAA

protein sequence of Gchil10106.t1

>Gchil10106.t1 ID=Gchil10106.t1|Name=Gchil10106.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=569bp
MAFITPQPTGSFLPNRPAFVFKSSEKSVNPILVPRVPRMVALPDTPNTPP
ETILSANPLHSFAKDPTDHGLALMDSVHLRNAKVRGEPVVIVVLGASGDL
AKKKTFPAIFSLYYHGLLPTDFVLYGFSRSAMSNDEFRELIYDTLSCRVI
DGERCQERMDLFLPKCFYHKGNYYDADSFGALDDVLQNGFEQKHPKTNRL
YYLAIPPKVFNASCSNINSSGRAASGWTRVVVEKPFGHDLSSYRDLRSNL
ASVLSEEETFRIDHFLAKELVQNLMTLRFANAIFEPLWNRYHVKSVQITF
KEHFGVEGRAGYFDQVGIIRDIMQNHLLQMLALLAMEPPVSLCAEDIRDE
KVKVLRAIEPLSAEDFATGQYAARDSLSTGYLEDDGVPPDSLTPTFASCV
LHINNARWDGVPFLMRAGKALDERKTEIRIQFKHVPGALFPVTDGAEHNE
LVIRVQPDEAIYMRIVSKVPGLTSRMEEARLNLFYRHAWEESKDIPDAYE
RLILDVIQGEKSLFIRDDELEAAWTIFTPALDELEGSRAPKPELYQYGST
GPEASDRLAGKYNVQWSN*

mRNA from alignment at tig00004442_pilon:936824..938530+

Legend: start_codonpolypeptideCDSexonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gchil10106.t1 ID=Gchil10106.t1|Name=Gchil10106.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1707bp|location=Sequence derived from alignment at tig00004442_pilon:936824..938530+ (Gracilaria chilensis NLEC103_M9 male)
ATGGCATTCATTACCCCTCAGCCGACTGGCTCCTTTTTGCCCAATCGACC
TGCTTTCGTTTTCAAATCTTCTGAGAAATCCGTCAATCCAATTCTTGTTC
CGCGGGTACCACGAATGGTGGCTCTTCCGGACACCCCAAACACACCTCCA
GAAACCATTCTTTCAGCAAATCCGCTACATAGTTTCGCTAAAGACCCCAC
GGATCATGGTCTTGCTCTCATGGATTCTGTGCATCTCCGCAATGCAAAGG
TTCGCGGCGAGCCCGTGGTCATCGTCGTTCTCGGTGCTTCTGGAGATCTG
GCGAAGAAGAAGACTTTTCCTGCTATTTTCAGTTTATATTATCACGGCTT
GCTGCCCACCGATTTCGTTCTGTACGGTTTCTCGAGAAGTGCCATGTCTA
ACGATGAATTTCGCGAGCTTATCTACGATACACTCAGTTGCAGAGTTATC
GATGGTGAGAGATGTCAGGAGAGGATGGATTTGTTCTTGCCCAAGTGCTT
TTATCACAAAGGCAATTATTACGATGCAGACTCCTTCGGAGCATTGGATG
ATGTTCTACAGAATGGCTTTGAACAAAAGCACCCAAAAACCAACAGGCTG
TACTATTTAGCCATCCCGCCAAAGGTGTTCAATGCCAGCTGTTCCAACAT
CAACAGCAGCGGCCGTGCTGCAAGTGGGTGGACTCGAGTCGTTGTTGAGA
AACCGTTCGGGCATGATCTCTCTTCGTATAGAGACCTTCGCTCTAATTTG
GCTTCCGTACTGTCCGAGGAGGAAACTTTTCGCATTGATCATTTTCTTGC
GAAAGAGCTAGTGCAAAATCTCATGACTCTGAGATTTGCAAATGCCATTT
TCGAACCTTTATGGAACCGCTATCATGTCAAGAGCGTCCAGATTACTTTC
AAGGAACATTTCGGTGTGGAAGGACGTGCCGGATATTTTGATCAAGTGGG
TATTATCAGAGATATAATGCAAAACCATCTTTTGCAAATGCTTGCCCTGT
TGGCAATGGAGCCCCCAGTCAGTTTGTGTGCGGAAGATATTCGGGATGAA
AAGGTGAAGGTGTTACGAGCGATCGAGCCGTTATCTGCTGAAGACTTTGC
AACAGGTCAATATGCGGCGAGGGATTCTTTATCTACTGGCTACCTGGAGG
ATGACGGTGTCCCTCCAGATTCTCTCACTCCCACTTTCGCATCTTGCGTG
TTGCATATTAACAATGCCCGATGGGATGGGGTGCCCTTTTTGATGCGAGC
AGGAAAGGCGTTGGACGAAAGGAAAACGGAGATTCGCATTCAATTTAAGC
ACGTACCAGGCGCCTTGTTCCCCGTTACTGATGGTGCTGAACACAACGAG
TTAGTTATTCGGGTGCAACCGGATGAAGCAATATACATGAGGATTGTATC
AAAGGTGCCTGGTCTCACATCGAGAATGGAAGAGGCAAGATTGAATCTCT
TCTATCGTCACGCGTGGGAAGAATCGAAAGATATTCCAGATGCATATGAG
CGATTAATATTGGATGTTATTCAAGGGGAGAAGTCACTGTTCATCCGTGA
TGACGAACTAGAGGCTGCTTGGACAATCTTCACACCTGCTCTTGACGAGC
TCGAGGGATCTCGTGCTCCGAAACCAGAGCTTTACCAATATGGAAGCACT
GGACCAGAGGCTAGTGATAGACTCGCTGGGAAGTACAATGTACAATGGTC
GAACTAA

Coding sequence (CDS) from alignment at tig00004442_pilon:936824..938530+

>Gchil10106.t1 ID=Gchil10106.t1|Name=Gchil10106.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1707bp|location=Sequence derived from alignment at tig00004442_pilon:936824..938530+ (Gracilaria chilensis NLEC103_M9 male)
ATGGCATTCATTACCCCTCAGCCGACTGGCTCCTTTTTGCCCAATCGACC
TGCTTTCGTTTTCAAATCTTCTGAGAAATCCGTCAATCCAATTCTTGTTC
CGCGGGTACCACGAATGGTGGCTCTTCCGGACACCCCAAACACACCTCCA
GAAACCATTCTTTCAGCAAATCCGCTACATAGTTTCGCTAAAGACCCCAC
GGATCATGGTCTTGCTCTCATGGATTCTGTGCATCTCCGCAATGCAAAGG
TTCGCGGCGAGCCCGTGGTCATCGTCGTTCTCGGTGCTTCTGGAGATCTG
GCGAAGAAGAAGACTTTTCCTGCTATTTTCAGTTTATATTATCACGGCTT
GCTGCCCACCGATTTCGTTCTGTACGGTTTCTCGAGAAGTGCCATGTCTA
ACGATGAATTTCGCGAGCTTATCTACGATACACTCAGTTGCAGAGTTATC
GATGGTGAGAGATGTCAGGAGAGGATGGATTTGTTCTTGCCCAAGTGCTT
TTATCACAAAGGCAATTATTACGATGCAGACTCCTTCGGAGCATTGGATG
ATGTTCTACAGAATGGCTTTGAACAAAAGCACCCAAAAACCAACAGGCTG
TACTATTTAGCCATCCCGCCAAAGGTGTTCAATGCCAGCTGTTCCAACAT
CAACAGCAGCGGCCGTGCTGCAAGTGGGTGGACTCGAGTCGTTGTTGAGA
AACCGTTCGGGCATGATCTCTCTTCGTATAGAGACCTTCGCTCTAATTTG
GCTTCCGTACTGTCCGAGGAGGAAACTTTTCGCATTGATCATTTTCTTGC
GAAAGAGCTAGTGCAAAATCTCATGACTCTGAGATTTGCAAATGCCATTT
TCGAACCTTTATGGAACCGCTATCATGTCAAGAGCGTCCAGATTACTTTC
AAGGAACATTTCGGTGTGGAAGGACGTGCCGGATATTTTGATCAAGTGGG
TATTATCAGAGATATAATGCAAAACCATCTTTTGCAAATGCTTGCCCTGT
TGGCAATGGAGCCCCCAGTCAGTTTGTGTGCGGAAGATATTCGGGATGAA
AAGGTGAAGGTGTTACGAGCGATCGAGCCGTTATCTGCTGAAGACTTTGC
AACAGGTCAATATGCGGCGAGGGATTCTTTATCTACTGGCTACCTGGAGG
ATGACGGTGTCCCTCCAGATTCTCTCACTCCCACTTTCGCATCTTGCGTG
TTGCATATTAACAATGCCCGATGGGATGGGGTGCCCTTTTTGATGCGAGC
AGGAAAGGCGTTGGACGAAAGGAAAACGGAGATTCGCATTCAATTTAAGC
ACGTACCAGGCGCCTTGTTCCCCGTTACTGATGGTGCTGAACACAACGAG
TTAGTTATTCGGGTGCAACCGGATGAAGCAATATACATGAGGATTGTATC
AAAGGTGCCTGGTCTCACATCGAGAATGGAAGAGGCAAGATTGAATCTCT
TCTATCGTCACGCGTGGGAAGAATCGAAAGATATTCCAGATGCATATGAG
CGATTAATATTGGATGTTATTCAAGGGGAGAAGTCACTGTTCATCCGTGA
TGACGAACTAGAGGCTGCTTGGACAATCTTCACACCTGCTCTTGACGAGC
TCGAGGGATCTCGTGCTCCGAAACCAGAGCTTTACCAATATGGAAGCACT
GGACCAGAGGCTAGTGATAGACTCGCTGGGAAGTACAATGTACAATGGTC
GAACTAA