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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 130081.XP_005703644.1 |
Preferred name | WDTC1 |
PFAMs | WD40 |
Max annot lvl | 2759|Eukaryota |
KEGG rclass | RC00003,RC00060,RC00181,RC00496 |
KEGG ko | ko:K11795,ko:K11804,ko:K11807,ko:K19199 |
KEGG Reaction | R03875,R04866,R04867 |
KEGG Pathway | ko00310,map00310 |
GOs | GO:0000122,GO:0000151,GO:0001101,GO:0001701,GO:0003674,GO:0004857,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006355,GO:0006357,GO:0006464,GO:0006629,GO:0006807,GO:0006950,GO:0007275,GO:0008150,GO:0008152,GO:0008361,GO:0009269,GO:0009414,GO:0009415,GO:0009628,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010035,GO:0010243,GO:0010468,GO:0010556,GO:0010558,GO:0010565,GO:0010605,GO:0010629,GO:0010883,GO:0010888,GO:0010889,GO:0010891,GO:0016043,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019318,GO:0019538,GO:0019725,GO:0019899,GO:0030234,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031461,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032535,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032991,GO:0035264,GO:0036211,GO:0040007,GO:0042221,GO:0042304,GO:0042393,GO:0042592,GO:0042826,GO:0043009,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043434,GO:0043687,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045717,GO:0045833,GO:0045892,GO:0045922,GO:0045934,GO:0046890,GO:0048519,GO:0048523,GO:0048589,GO:0048856,GO:0048878,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051055,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0055082,GO:0060255,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070647,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0080008,GO:0080090,GO:0090066,GO:0098772,GO:1901564,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1905952,GO:1905953,GO:1990234,GO:2000112,GO:2000113,GO:2001141 |
Evalue | 1.71e-41 |
EggNOG OGs | KOG1334@1|root,KOG1310@2759|Eukaryota |
EC | 2.1.1.43 |
Description | negative regulation of fatty acid biosynthetic process |
COG category | S |
BRITE | ko00000,ko00001,ko01000,ko03036,ko04121 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil10033.t1 ID=Gchil10033.t1|Name=Gchil10033.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=739bp MDVGLRSLSSVLRHRECDLISRPESILHGHHSLTRKMDWSVQLTGHTGCV NRLALDEEGSLLLSGSDDCTLRIWSIEDHNCIRSKGVVTPGHVNNIFGVA FMPNTGNSLVASAGLDQQVHLTNVETSKSLRWFCHTDSVKTVAPLDANVF VTASKDGTSRLFDARIPPTAHPSDSSIIIVNIPCTNPFSNGINSAIPSPM FSNHILVSSGDPYLRIYDLRFDISNRLNSPRISQLKSHVSCIETFCPSHL YDLAPERCSPSDLIHPAYVTFATFSTDANQIVASYYMDAVHVFNRRRQSS SVPYYSGFRFKSERKRVVWLSTQEAAERLLNGSASCAKTAIAEANRVLEL EPRNVLALLYKAESLLLRQNYSDFREAFETLQLLINTIRETPQRITTLWG SDGPMRSPCFPESLGNWERKAHIWLMIFEFQQIIAMYRMIPYSQTGVWQP GVNGLVTRRRFEHLRELCSELMEKTWKMFGKRPSANGQSNHNPGCMHDSS LFKADIHREALGHEEEASRLYGTEFSRLRKQILVRLVEKFASKLQKLLFA FDEKIADLEPLSPNSQANRPMSSTKEYWVRMLDQEHIPYHFARELKALEA EEKRLLAGFDPEELWSVRPRKEIPSKRFHGHQSEKTDIKEARFYGADNQV VLSGSDDGFVYMWSAGTCELLTRVSADDQIVNCVLPHPYRAMVLVSGIDN TIKVLTPYLPNSDEFQQEGSLNDEKAGSQYKSIALKSE* back to topspliced messenger RNA >Gchil10033.t1 ID=Gchil10033.t1|Name=Gchil10033.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2217bp|location=Sequence derived from alignment at tig00004442_pilon:497803..500019+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGATGTAGGCCTTCGCAGCCTCTCTTCCGTTCTTCGTCACCGAGAATG TGACCTCATTTCTCGCCCCGAAAGCATCTTGCATGGCCACCACTCTCTCA CTCGCAAAATGGACTGGTCTGTGCAGCTGACCGGCCACACGGGTTGCGTC AACCGTCTGGCACTAGATGAAGAAGGAAGTCTACTTCTTTCAGGCTCAGA TGACTGCACTCTCCGGATCTGGTCCATTGAAGACCATAACTGCATCCGGA GTAAGGGAGTTGTCACCCCGGGGCATGTCAACAACATATTTGGCGTAGCC TTCATGCCAAACACCGGAAACTCTCTAGTGGCTTCCGCTGGATTAGATCA GCAAGTTCATTTGACAAACGTCGAGACCTCAAAGAGTCTCCGCTGGTTTT GCCACACCGATTCGGTGAAAACTGTAGCTCCGTTGGATGCGAACGTTTTT GTAACAGCTTCAAAGGATGGAACGTCGCGCCTGTTCGATGCTCGTATCCC TCCCACTGCCCATCCATCCGATTCGTCTATCATTATCGTCAATATTCCGT GTACCAATCCATTTTCGAATGGCATAAACTCTGCTATACCGTCTCCGATG TTCTCCAATCATATCCTGGTGTCTTCTGGAGACCCTTATTTGCGAATATA TGACTTGCGATTCGACATCAGCAATCGCCTCAATTCACCTCGAATCTCGC AACTCAAATCTCATGTTAGCTGCATTGAAACCTTCTGTCCTTCTCATTTG TATGATTTAGCTCCGGAACGATGTTCTCCAAGTGACCTTATTCATCCGGC GTACGTCACATTCGCCACCTTTTCAACAGACGCAAACCAAATAGTTGCGT CGTACTACATGGACGCAGTCCACGTTTTCAATCGCCGCCGACAGTCGTCC TCAGTGCCCTATTATTCAGGCTTTAGGTTCAAGTCCGAAAGAAAGCGTGT AGTGTGGTTGAGCACTCAAGAGGCCGCTGAAAGGCTTTTGAACGGATCAG CGAGCTGTGCGAAGACCGCAATAGCGGAAGCAAATCGCGTTCTTGAGTTG GAACCCCGAAATGTTCTTGCGTTACTCTATAAAGCCGAGAGTTTGCTTTT GCGCCAAAACTATAGTGATTTTCGAGAAGCATTTGAAACTCTCCAGCTTT TAATCAATACTATTAGGGAAACGCCTCAGCGTATCACAACCCTATGGGGA TCAGATGGTCCAATGCGTTCTCCATGTTTCCCAGAATCGTTAGGCAATTG GGAACGAAAAGCACATATATGGTTGATGATATTCGAATTTCAGCAGATAA TAGCAATGTATAGAATGATACCATACTCGCAAACCGGGGTTTGGCAACCT GGAGTAAATGGATTAGTGACAAGAAGGCGTTTCGAACATCTTAGAGAGCT CTGCAGTGAATTAATGGAGAAAACATGGAAAATGTTTGGCAAAAGACCAA GTGCAAACGGCCAGTCTAATCACAACCCAGGATGCATGCATGATTCTTCT CTATTTAAGGCTGACATACACAGAGAAGCTCTGGGTCACGAAGAAGAAGC ATCACGTCTATACGGTACAGAGTTTTCGCGATTGCGTAAGCAAATCTTGG TTCGATTAGTAGAGAAATTTGCTTCCAAACTTCAAAAGCTCCTCTTTGCA TTTGACGAAAAAATCGCTGATCTCGAGCCCCTCAGTCCAAATTCACAAGC CAACCGTCCTATGTCATCGACAAAGGAGTATTGGGTGAGGATGTTGGATC AGGAGCACATCCCTTACCATTTTGCAAGAGAGCTGAAAGCATTGGAAGCT GAGGAGAAAAGGCTATTGGCAGGATTTGACCCGGAGGAGTTGTGGAGCGT GAGGCCAAGAAAAGAGATCCCAAGCAAAAGGTTCCATGGGCATCAAAGCG AAAAGACAGATATAAAAGAAGCTCGATTTTACGGCGCTGACAATCAGGTG GTTCTATCGGGGTCCGATGACGGTTTTGTTTATATGTGGTCTGCAGGAAC ATGCGAACTGCTTACTCGAGTTTCTGCCGATGATCAGATTGTCAATTGTG TTCTCCCGCATCCTTACCGGGCGATGGTCCTCGTTTCTGGAATAGATAAC ACGATCAAGGTATTAACTCCATATCTACCAAACAGCGATGAGTTCCAGCA AGAAGGCAGTCTCAATGATGAAAAGGCGGGTTCTCAGTACAAGAGCATTG CACTGAAAAGCGAATGA back to topprotein sequence of Gchil10033.t1 >Gchil10033.t1 ID=Gchil10033.t1|Name=Gchil10033.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=739bp
MDVGLRSLSSVLRHRECDLISRPESILHGHHSLTRKMDWSVQLTGHTGCV NRLALDEEGSLLLSGSDDCTLRIWSIEDHNCIRSKGVVTPGHVNNIFGVA FMPNTGNSLVASAGLDQQVHLTNVETSKSLRWFCHTDSVKTVAPLDANVF VTASKDGTSRLFDARIPPTAHPSDSSIIIVNIPCTNPFSNGINSAIPSPM FSNHILVSSGDPYLRIYDLRFDISNRLNSPRISQLKSHVSCIETFCPSHL YDLAPERCSPSDLIHPAYVTFATFSTDANQIVASYYMDAVHVFNRRRQSS SVPYYSGFRFKSERKRVVWLSTQEAAERLLNGSASCAKTAIAEANRVLEL EPRNVLALLYKAESLLLRQNYSDFREAFETLQLLINTIRETPQRITTLWG SDGPMRSPCFPESLGNWERKAHIWLMIFEFQQIIAMYRMIPYSQTGVWQP GVNGLVTRRRFEHLRELCSELMEKTWKMFGKRPSANGQSNHNPGCMHDSS LFKADIHREALGHEEEASRLYGTEFSRLRKQILVRLVEKFASKLQKLLFA FDEKIADLEPLSPNSQANRPMSSTKEYWVRMLDQEHIPYHFARELKALEA EEKRLLAGFDPEELWSVRPRKEIPSKRFHGHQSEKTDIKEARFYGADNQV VLSGSDDGFVYMWSAGTCELLTRVSADDQIVNCVLPHPYRAMVLVSGIDN TIKVLTPYLPNSDEFQQEGSLNDEKAGSQYKSIALKSE* back to topmRNA from alignment at tig00004442_pilon:497803..500019+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil10033.t1 ID=Gchil10033.t1|Name=Gchil10033.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2217bp|location=Sequence derived from alignment at tig00004442_pilon:497803..500019+ (Gracilaria chilensis NLEC103_M9 male) ATGGATGTAGGCCTTCGCAGCCTCTCTTCCGTTCTTCGTCACCGAGAATG
TGACCTCATTTCTCGCCCCGAAAGCATCTTGCATGGCCACCACTCTCTCA
CTCGCAAAATGGACTGGTCTGTGCAGCTGACCGGCCACACGGGTTGCGTC
AACCGTCTGGCACTAGATGAAGAAGGAAGTCTACTTCTTTCAGGCTCAGA
TGACTGCACTCTCCGGATCTGGTCCATTGAAGACCATAACTGCATCCGGA
GTAAGGGAGTTGTCACCCCGGGGCATGTCAACAACATATTTGGCGTAGCC
TTCATGCCAAACACCGGAAACTCTCTAGTGGCTTCCGCTGGATTAGATCA
GCAAGTTCATTTGACAAACGTCGAGACCTCAAAGAGTCTCCGCTGGTTTT
GCCACACCGATTCGGTGAAAACTGTAGCTCCGTTGGATGCGAACGTTTTT
GTAACAGCTTCAAAGGATGGAACGTCGCGCCTGTTCGATGCTCGTATCCC
TCCCACTGCCCATCCATCCGATTCGTCTATCATTATCGTCAATATTCCGT
GTACCAATCCATTTTCGAATGGCATAAACTCTGCTATACCGTCTCCGATG
TTCTCCAATCATATCCTGGTGTCTTCTGGAGACCCTTATTTGCGAATATA
TGACTTGCGATTCGACATCAGCAATCGCCTCAATTCACCTCGAATCTCGC
AACTCAAATCTCATGTTAGCTGCATTGAAACCTTCTGTCCTTCTCATTTG
TATGATTTAGCTCCGGAACGATGTTCTCCAAGTGACCTTATTCATCCGGC
GTACGTCACATTCGCCACCTTTTCAACAGACGCAAACCAAATAGTTGCGT
CGTACTACATGGACGCAGTCCACGTTTTCAATCGCCGCCGACAGTCGTCC
TCAGTGCCCTATTATTCAGGCTTTAGGTTCAAGTCCGAAAGAAAGCGTGT
AGTGTGGTTGAGCACTCAAGAGGCCGCTGAAAGGCTTTTGAACGGATCAG
CGAGCTGTGCGAAGACCGCAATAGCGGAAGCAAATCGCGTTCTTGAGTTG
GAACCCCGAAATGTTCTTGCGTTACTCTATAAAGCCGAGAGTTTGCTTTT
GCGCCAAAACTATAGTGATTTTCGAGAAGCATTTGAAACTCTCCAGCTTT
TAATCAATACTATTAGGGAAACGCCTCAGCGTATCACAACCCTATGGGGA
TCAGATGGTCCAATGCGTTCTCCATGTTTCCCAGAATCGTTAGGCAATTG
GGAACGAAAAGCACATATATGGTTGATGATATTCGAATTTCAGCAGATAA
TAGCAATGTATAGAATGATACCATACTCGCAAACCGGGGTTTGGCAACCT
GGAGTAAATGGATTAGTGACAAGAAGGCGTTTCGAACATCTTAGAGAGCT
CTGCAGTGAATTAATGGAGAAAACATGGAAAATGTTTGGCAAAAGACCAA
GTGCAAACGGCCAGTCTAATCACAACCCAGGATGCATGCATGATTCTTCT
CTATTTAAGGCTGACATACACAGAGAAGCTCTGGGTCACGAAGAAGAAGC
ATCACGTCTATACGGTACAGAGTTTTCGCGATTGCGTAAGCAAATCTTGG
TTCGATTAGTAGAGAAATTTGCTTCCAAACTTCAAAAGCTCCTCTTTGCA
TTTGACGAAAAAATCGCTGATCTCGAGCCCCTCAGTCCAAATTCACAAGC
CAACCGTCCTATGTCATCGACAAAGGAGTATTGGGTGAGGATGTTGGATC
AGGAGCACATCCCTTACCATTTTGCAAGAGAGCTGAAAGCATTGGAAGCT
GAGGAGAAAAGGCTATTGGCAGGATTTGACCCGGAGGAGTTGTGGAGCGT
GAGGCCAAGAAAAGAGATCCCAAGCAAAAGGTTCCATGGGCATCAAAGCG
AAAAGACAGATATAAAAGAAGCTCGATTTTACGGCGCTGACAATCAGGTG
GTTCTATCGGGGTCCGATGACGGTTTTGTTTATATGTGGTCTGCAGGAAC
ATGCGAACTGCTTACTCGAGTTTCTGCCGATGATCAGATTGTCAATTGTG
TTCTCCCGCATCCTTACCGGGCGATGGTCCTCGTTTCTGGAATAGATAAC
ACGATCAAGGTATTAACTCCATATCTACCAAACAGCGATGAGTTCCAGCA
AGAAGGCAGTCTCAATGATGAAAAGGCGGGTTCTCAGTACAAGAGCATTG
CACTGAAAAGCGAATGA back to topCoding sequence (CDS) from alignment at tig00004442_pilon:497803..500019+ >Gchil10033.t1 ID=Gchil10033.t1|Name=Gchil10033.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2217bp|location=Sequence derived from alignment at tig00004442_pilon:497803..500019+ (Gracilaria chilensis NLEC103_M9 male) ATGGATGTAGGCCTTCGCAGCCTCTCTTCCGTTCTTCGTCACCGAGAATG TGACCTCATTTCTCGCCCCGAAAGCATCTTGCATGGCCACCACTCTCTCA CTCGCAAAATGGACTGGTCTGTGCAGCTGACCGGCCACACGGGTTGCGTC AACCGTCTGGCACTAGATGAAGAAGGAAGTCTACTTCTTTCAGGCTCAGA TGACTGCACTCTCCGGATCTGGTCCATTGAAGACCATAACTGCATCCGGA GTAAGGGAGTTGTCACCCCGGGGCATGTCAACAACATATTTGGCGTAGCC TTCATGCCAAACACCGGAAACTCTCTAGTGGCTTCCGCTGGATTAGATCA GCAAGTTCATTTGACAAACGTCGAGACCTCAAAGAGTCTCCGCTGGTTTT GCCACACCGATTCGGTGAAAACTGTAGCTCCGTTGGATGCGAACGTTTTT GTAACAGCTTCAAAGGATGGAACGTCGCGCCTGTTCGATGCTCGTATCCC TCCCACTGCCCATCCATCCGATTCGTCTATCATTATCGTCAATATTCCGT GTACCAATCCATTTTCGAATGGCATAAACTCTGCTATACCGTCTCCGATG TTCTCCAATCATATCCTGGTGTCTTCTGGAGACCCTTATTTGCGAATATA TGACTTGCGATTCGACATCAGCAATCGCCTCAATTCACCTCGAATCTCGC AACTCAAATCTCATGTTAGCTGCATTGAAACCTTCTGTCCTTCTCATTTG TATGATTTAGCTCCGGAACGATGTTCTCCAAGTGACCTTATTCATCCGGC GTACGTCACATTCGCCACCTTTTCAACAGACGCAAACCAAATAGTTGCGT CGTACTACATGGACGCAGTCCACGTTTTCAATCGCCGCCGACAGTCGTCC TCAGTGCCCTATTATTCAGGCTTTAGGTTCAAGTCCGAAAGAAAGCGTGT AGTGTGGTTGAGCACTCAAGAGGCCGCTGAAAGGCTTTTGAACGGATCAG CGAGCTGTGCGAAGACCGCAATAGCGGAAGCAAATCGCGTTCTTGAGTTG GAACCCCGAAATGTTCTTGCGTTACTCTATAAAGCCGAGAGTTTGCTTTT GCGCCAAAACTATAGTGATTTTCGAGAAGCATTTGAAACTCTCCAGCTTT TAATCAATACTATTAGGGAAACGCCTCAGCGTATCACAACCCTATGGGGA TCAGATGGTCCAATGCGTTCTCCATGTTTCCCAGAATCGTTAGGCAATTG GGAACGAAAAGCACATATATGGTTGATGATATTCGAATTTCAGCAGATAA TAGCAATGTATAGAATGATACCATACTCGCAAACCGGGGTTTGGCAACCT GGAGTAAATGGATTAGTGACAAGAAGGCGTTTCGAACATCTTAGAGAGCT CTGCAGTGAATTAATGGAGAAAACATGGAAAATGTTTGGCAAAAGACCAA GTGCAAACGGCCAGTCTAATCACAACCCAGGATGCATGCATGATTCTTCT CTATTTAAGGCTGACATACACAGAGAAGCTCTGGGTCACGAAGAAGAAGC ATCACGTCTATACGGTACAGAGTTTTCGCGATTGCGTAAGCAAATCTTGG TTCGATTAGTAGAGAAATTTGCTTCCAAACTTCAAAAGCTCCTCTTTGCA TTTGACGAAAAAATCGCTGATCTCGAGCCCCTCAGTCCAAATTCACAAGC CAACCGTCCTATGTCATCGACAAAGGAGTATTGGGTGAGGATGTTGGATC AGGAGCACATCCCTTACCATTTTGCAAGAGAGCTGAAAGCATTGGAAGCT GAGGAGAAAAGGCTATTGGCAGGATTTGACCCGGAGGAGTTGTGGAGCGT GAGGCCAAGAAAAGAGATCCCAAGCAAAAGGTTCCATGGGCATCAAAGCG AAAAGACAGATATAAAAGAAGCTCGATTTTACGGCGCTGACAATCAGGTG GTTCTATCGGGGTCCGATGACGGTTTTGTTTATATGTGGTCTGCAGGAAC ATGCGAACTGCTTACTCGAGTTTCTGCCGATGATCAGATTGTCAATTGTG TTCTCCCGCATCCTTACCGGGCGATGGTCCTCGTTTCTGGAATAGATAAC ACGATCAAGGTATTAACTCCATATCTACCAAACAGCGATGAGTTCCAGCA AGAAGGCAGTCTCAATGATGAAAAGGCGGGTTCTCAGTACAAGAGCATTG CACTGAAAAGCGAATGA back to top
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