Gcaud9921.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9921.t1
Unique NameGcaud9921.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length485
Homology
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BLAST of Gcaud9921.t1 vs. uniprot
Match: A0A7S4FDN2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FDN2_CHRCT)

HSP 1 Score: 79.0 bits (193), Expect = 9.850e-12
Identity = 50/157 (31.85%), Postives = 82/157 (52.23%), Query Frame = 0 
Query:    5 DDYLSVSEKVQLGITHAAS-YYHFDWLLKTDSDSFVCFTRVLRLLSN----FDAEGVVHVGHAESTNFLKPDPTHKWYDPG-LTDILHNPRQHIEKDTVMHHPYMQGAGYIISRGAFSALSKVSKLLRYSPIEDAMVGGWLLAFTTHRALMALDLWS 155
            D YL +  K++  +   AS    FD+LLK D D+F+CFT V  L+      F  +  +++GH E+ + +   P  K+YD   L D+L +  Q+++     + PYMQG GY++SR     +  ++  L+    ED MVG WL+    +R  +    +S
Sbjct:  173 DGYLQLGHKIKAMMQWIASRVIRFDFLLKADLDTFICFTMVTDLIDTMRIRFGTDQRIYLGHLETCSRVVHHPQDKFYDKHYLEDVLQS--QNVD----CYPPYMQGLGYVLSRDLVQLIGFMAPTLKVYTNEDMMVGIWLVGHQVNRGQLVAKTFS 323
[Close]
BLAST of Gcaud9921.t1 vs. uniprot
Match: A0A7S4B0K0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B0K0_CHRCT)

HSP 1 Score: 74.7 bits (182), Expect = 1.300e-10
Identity = 50/140 (35.71%), Postives = 72/140 (51.43%), Query Frame = 0 
Query:    5 DDYLSVSEKVQLGITHAASYYHFDWLLKTDSDSFVCFTRVLRLLSNFDAEGVVHVGHAESTNFLKPDPTH----KWYDPGLTDILHNPRQHIEKDTVMHHPYMQGAGYIISRG-AFSALSKVSKLLRYSPIEDAMVGGWL 139
            D Y  +S+KV   I  A   + F +LLKTD DSFVC +R++  L      G+ ++G     + +  DP      +W D    +I             ++ PYMQGAGYI+SR  A   +SK ++L +  PIEDA+VG  L
Sbjct:  306 DGYREISQKVIAAIRFANENFDFKYLLKTDDDSFVCLSRLMESLRLQPRSGL-YMGVLNKNHSIVLDPWQAHYPRWRDAEYAEIFKRR---------VYLPYMQGAGYILSRDMAERVVSKAAELPKIPPIEDALVGALL 435
The following BLAST results are available for this feature:
BLAST of Gcaud9921.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S4FDN2_CHRCT9.850e-1231.85Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4B0K0_CHRCT1.300e-1035.71Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002659Glycosyl transferase, family 31PFAMPF01762Galactosyl_Tcoord: 5..142
e-value: 2.5E-12
score: 47.0
NoneNo IPR availableGENE3D3.90.550.50coord: 2..202
e-value: 8.1E-12
score: 46.9
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain Acoord: 210..425
e-value: 1.8E-12
score: 49.3
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 214..480
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 8..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_302_length_31315_cov_4.933353contigNODE_302_length_31315_cov_4.933353:19723..21177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9921.t1Gcaud9921.t1Gracilaria caudata M_176_S67 malemRNANODE_302_length_31315_cov_4.933353 19723..21177 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9921.t1 ID=Gcaud9921.t1|Name=Gcaud9921.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=485bp
MVRPDDYLSVSEKVQLGITHAASYYHFDWLLKTDSDSFVCFTRVLRLLSN
FDAEGVVHVGHAESTNFLKPDPTHKWYDPGLTDILHNPRQHIEKDTVMHH
PYMQGAGYIISRGAFSALSKVSKLLRYSPIEDAMVGGWLLAFTTHRALMA
LDLWSYRRHCYLQPFDYISHKRKGTNKLKECMKTNSHCLEVSKRDDTDVR
QVAFLIEADTSNKTRPLMDVYDSIRAAFPNNEVVIGDTSGSDSSMKRFLS
ARGDDNVKMLWLKQKPRSVVLNELVASTTSPFVCILNAEQKISWETLIAR
MLRPVWNDDADVTSGFLVFNHNRLHSEQGLFPKGHTIKQNNSDIIFEQVE
TSWNIGAEHEKSISGTSGFLLARTQFLKEKGWRDYGPFSEIEFSLRLWRA
GARVKLVNSGIRHGYHYAVTPPSENDADVKSYAAPFCEQVARLMKWRQVG
SVAVSSATVHCSERWFRRKYSKYRWRWLNSFVEW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002659Glyco_trans_31
IPR029044Nucleotide-diphossugar_trans